mRNA_S-ischiensis_contig10.1587.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: D7FPF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF1_ECTSI) HSP 1 Score: 369 bits (946), Expect = 2.770e-122 Identity = 178/258 (68.99%), Postives = 220/258 (85.27%), Query Frame = 3
Query: 237 GNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDKTSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAF 1010
GN FFKNGD++NAIAKYT+AI DP+NHTY+SNRSASYAGL +W EAA DA +CIK+NK+FVKGYFRLA+AK++ ++D A D +KRGL VEPRNADLK+NLKE+++++R EKV+ VA AE+Q++A DYGAA++ E+G+RLDA N L + +RA+P++EA E+SR+SGLS+T LLKE GDDFY++A FE AI KYTECLDSLPDK S+LA+KCYSNRSACYKQLSNFD TV DTTAVLEVEP NVKAL+RRA F
Sbjct: 13 GNGFFKNGDYRNAIAKYTDAIAADPNNHTYWSNRSASYAGLMEWEEAAHDAAECIKVNKNFVKGYFRLATAKKNLNELDAAADVIKRGLCVEPRNADLKKNLKEIDELIRGEKVSQFVAQAEAQLKAGDYGAAMKAVEAGMRLDAGNKDLQAVQDRAKPKFEAAERSRKSGLSSTALLKEKGDDFYRKASFEDAIVKYTECLDSLPDKRSELAIKCYSNRSACYKQLSNFDATVEDTTAVLEVEPENVKALVRRAYRF 270
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A836CLV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV7_9STRA) HSP 1 Score: 349 bits (895), Expect = 1.840e-114 Identity = 168/265 (63.40%), Postives = 220/265 (83.02%), Query Frame = 3
Query: 231 SQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDKTSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
++GN FK GD++ AI KY EAI +DP+NHTY+SNRSASYAGL+ W ++ DA+QC+ ++K+FVKGYFR+A+A+++ +++GA D L RGLAVEPRNADLK+NLKE++++LR +KVA ++ AE+ ++ DYG AV+ C+S LRLDA N + RI+ A+P++EAQEK+R+SGLS TE LKE GDDFYK+AQFE AI KYT+C+D+L D+ LALKC+SNRSACYKQLSNFDG + DT+AVLEVEP NVKAL+RRAQAFEAIER
Sbjct: 11 AEGNAAFKAGDYRKAIEKYGEAIAIDPANHTYWSNRSASYAGLDMWEQSRDDAKQCVTVDKTFVKGYFRMATAQKNLNELEGARDTLNRGLAVEPRNADLKKNLKEIDELLRADKVAKLIGQAETALKLGDYGDAVKLCDSALRLDAGNSDVQRILRVAQPKFEAQEKARKSGLSRTEHLKEEGDDFYKRAQFEDAIKKYTQCIDALGDRHHALALKCFSNRSACYKQLSNFDGVIEDTSAVLEVEPGNVKALVRRAQAFEAIER 275
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A6V1KEM3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KEM3_HETAK) HSP 1 Score: 335 bits (859), Expect = 4.960e-109 Identity = 163/265 (61.51%), Postives = 212/265 (80.00%), Query Frame = 3
Query: 231 SQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDKTSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
++GN FFK GD+ NA+AKY+EAI++DPS Y+SNRSASYAG+ W +AA D CI+ +K+F+KGYFR ASA++ G +DGAV L++GLA++P+NADLK+ + +VE+ +R +KV + + A++ +A DYGAAVR+ E+GLRLDA N LT +M+R RP WEA+EKSRR+GLS TE LKE GDD YK A FE AI KYT+CLD+L DK+S+LA+KCYSNRSACYKQLSNFDG ++D T V+E +P NVKAL+RRAQAFEA ER
Sbjct: 11 AEGNNFFKAGDYANAVAKYSEAIDIDPSVPAYWSNRSASYAGMGNWEKAAEDGAGCIRADKNFIKGYFRCASAQQKLGQLDGAVATLRQGLAIQPQNADLKKLVSDVEEEIRLKKVETFLQQAQAHNKAGDYGAAVRSLENGLRLDAGNSQLTSLMDRVRPLWEAEEKSRRAGLSRTEQLKEQGDDCYKAANFEGAIQKYTQCLDALSDKSSELAIKCYSNRSACYKQLSNFDGVISDCTMVIEAQPENVKALVRRAQAFEACER 275
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A7S3GT25_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT25_9STRA) HSP 1 Score: 295 bits (755), Expect = 2.150e-93 Identity = 148/265 (55.85%), Postives = 203/265 (76.60%), Query Frame = 3
Query: 231 SQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDKTSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
+ GN FFKN ++ AI KYTEAIELD S+ T++SNRSA YA L W EAA D +QCI +KSFVKGYFR A A ++ G+ +GA+DA+KRGL V+ +ADLKR +E+++ +R +KV S+V+ AE Q+++ND A +T ++GLRLD ++ AL ++M+ RP++E EK R + L E +KE GD +K A FE AI YT+CLDS+ DK+S+LALKCY+NR+AC+KQLSNF+GT++D+TAVLE +P++VKAL+RRAQAFEA ER
Sbjct: 11 NDGNTFFKNKQYKQAIEKYTEAIELDASDVTFYSNRSACYAALNMWNEAADDGRQCIITDKSFVKGYFRAALALQALGNYEGALDAVKRGLGVDSTSADLKRMSRELDEQIRLKKVESLVSQAEGQVRSNDLAGAYKTIDAGLRLDPNSKALNKLMDEVRPKYERAEKHRLASLDPKERIKEEGDTCFKNANFEGAIKAYTKCLDSMSDKSSELALKCYNNRAACHKQLSNFEGTISDSTAVLEYKPDDVKALVRRAQAFEACER 275
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: W7U1V7_9STRA (Stress-inducible protein sti1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1V7_9STRA) HSP 1 Score: 288 bits (737), Expect = 1.360e-90 Identity = 145/272 (53.31%), Postives = 197/272 (72.43%), Query Frame = 3
Query: 210 APTSLFGSQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDKTSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
+P L S GNQ FK G++ AI Y+EA++LD + HTY+SNRSASYAGL W AA DA +C+K NK FVKGYFRLA A+++ D A+D + +GL ++ N+DLK KE+ED +R +KVAS V A+ Q + DYGA + T ESGLR+DA N AL + + +P WE +E++R++GLS E +KE GD YK A FE+AI +Y++ LD + D+TS A+K SNR+AC+KQLSNFDG ++D T+VLEV P++VK+L+RRAQAFEA+ER
Sbjct: 11 SPLYLLPSLGNQAFKAGNYAKAIEHYSEALKLDATAHTYWSNRSASYAGLGDWENAANDAAECVKANKKFVKGYFRLALAQKNLQRYDQALDTIMKGLGIDFGNSDLKSMKKEIEDAVRLQKVASYVETAKQQFASRDYGACLSTIESGLRIDAGNAALVALKGKVQPLWEQKERARKAGLSPVEKMKEEGDALYKDANFEAAIAQYSKTLDKMDDQTSDFAMKVLSNRAACHKQLSNFDGVISDCTSVLEVRPDDVKSLLRRAQAFEAVER 282
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A7S2DVE1_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DVE1_9STRA) HSP 1 Score: 276 bits (705), Expect = 7.980e-86 Identity = 143/276 (51.81%), Postives = 191/276 (69.20%), Query Frame = 3
Query: 207 SAPTSLFGSQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDK---TSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
+A QGNQFFK G + AI KY EA +DP+ Y+SN +A Y L ++ E A A+ CIK +++FVKGYFRLA+A++ D+ G + L+ GLAV+ N DLKR KEV+++LR E+VA + AE QMQ+ D A +T E R+DA NP + R+M R +P++EA E R++GLS TE+ KE GD+ YK+A FE AI +YT+C+D+L S+LA+K YSNR+ACYKQ+SNFDGTV D TAVLEV+P NVKAL+RRAQA E +ER
Sbjct: 4 NAQAEALKGQGNQFFKGGQYAAAIEKYKEATSIDPNVPAYWSNMAACYEKLGKYDEMAEAARSCIKADRTFVKGYFRLATAQKGQNDLAGCIKTLESGLAVQSSNPDLKRMKKEVQELLRGEQVAGYCSRAEEQMQSGDIAGAYKTLELASRIDAGNPDIERMMSRVKPKYEAMEARRKAGLSATEIYKERGDERYKKADFEGAIEEYTKCIDTLRADGKGQSELAMKAYSNRAACYKQISNFDGTVEDCTAVLEVDPENVKALIRRAQALEGLER 279
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A7S3P6E4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6E4_9STRA) HSP 1 Score: 265 bits (678), Expect = 9.050e-82 Identity = 138/275 (50.18%), Postives = 189/275 (68.73%), Query Frame = 3
Query: 210 APTSLFGSQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDKTSQ---LALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
A F ++GN+ FK G F AIAKY +A +LD Y+SN +A + L ++ E A + CIK +++F+KGYFRLASA+++ D+DG L+ GLA+E N DLK+ K+V+++LR+E+VA AE Q + G A++T E RLDA NP + + + +P ++ QEK+R++ LS EL KE GD+ YK AQFE+AI +YT+CL L K Q LA+K YSNR+ACYKQ+SNFDGT+AD TAVLEVEP+NVKAL+RRAQAFE +ER
Sbjct: 4 AEAEAFKAEGNKLFKAGQFAAAIAKYQQATKLDDGVPAYWSNMAACFEKLGKFEEMAEAGRSCIKADRTFIKGYFRLASAQKALNDLDGCTKTLESGLAIEASNPDLKKMKKDVQEMLRQEQVAGYAKQAEEQFRGGQIGEAMKTLELASRLDAGNPTIQALQAKVKPAFDKQEKARKAKLSGAELYKEKGDECYKNAQFENAIAEYTKCLKQLESKGQQGSPLAVKTYSNRAACYKQISNFDGTIADCTAVLEVEPDNVKALIRRAQAFEGVER 278
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A7S2WW78_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW78_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.400e-81 Identity = 140/267 (52.43%), Postives = 183/267 (68.54%), Query Frame = 3
Query: 231 SQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLD--SLPDKTSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
++GN FK D++ AI YT+AIELDP+ H Y+SNRSA YAGL+QW +AA D CI++NKSF+KGYFRLA+A+ + GA + L GLAVEPRN DL ++D +R +K +++ AAAE + A D A ++ E +D+ N AL E+ ++EA EKSRRS LS E +KE GDD YK FE AI Y++C+D S+P S L +K +NR+ACYKQLSNFD T++D TAVLE EP NVKAL+RRAQAFEA+ER
Sbjct: 30 AEGNARFKAKDYRGAIEFYTQAIELDPTQHAYYSNRSACYAGLDQWEQAAEDGASCIRVNKSFIKGYFRLATAQEKMDQLRGAGETLTMGLAVEPRNKDLLSMKARIDDGIRRQKSSTLQAAAEKALAAGDVATAFKSLEQARAVDSGNDALQAKFEKVSRQYEAAEKSRRSNLSPVEQMKEQGDDKYKAGMFEEAIQLYSQCIDHSSVP---SALQVKALNNRAACYKQLSNFDATISDCTAVLEAEPENVKALVRRAQAFEAVER 293
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A7S1CX05_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CX05_CYCTE) HSP 1 Score: 264 bits (674), Expect = 3.370e-81 Identity = 135/268 (50.37%), Postives = 188/268 (70.15%), Query Frame = 3
Query: 231 SQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDK---TSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
++GN FFK G + AI KY A ++DP+ Y+SN +A + L+Q+ E A+QCIK +++FVKGYFRLA+A++S G + + L+ GLAV+ N DLKR KE+++ R ++V + A AE QMQ D A++T E RLDA NP++ + +R +P+++ E+ R+S LS TEL KE GD++YK A FE AI +YT+CLD+L + S LALK YSNR+ACYKQ+SNFDGT++D T VLE+EP NVKAL+RRAQAFE +ER
Sbjct: 11 AEGNTFFKGGQYAKAIEKYVAATKIDPTVPAYWSNMAACHEKLQQFQEMEEAARQCIKADRAFVKGYFRLATAQKSLGQLAECIKTLESGLAVQSSNPDLKRMKKEIQEQQRHDQVKAYCAKAEEQMQNGDIAGAMKTLELASRLDAGNPSVEAMKKRVQPKFDQMERQRKSSLSATELYKEKGDEYYKAANFELAIEEYTKCLDNLQKEGKAESPLALKAYSNRAACYKQISNFDGTISDCTMVLEIEPENVKALIRRAQAFEGVER 278
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Match: A0A7S4K7I6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K7I6_9STRA) HSP 1 Score: 263 bits (671), Expect = 3.900e-80 Identity = 139/288 (48.26%), Postives = 190/288 (65.97%), Query Frame = 3
Query: 171 CLGFNMLRLAVTSAPTSLFGSQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNRSASYAGLEQWAEAARDAQQCIKINKSFVKGYFRLASAKRSGGDMDGAVDALKRGLAVEPRNADLKRNLKEVEDILREEKVASIVAAAESQMQANDYGAAVRTCESGLRLDASNPALTRIMERARPRWEAQEKSRRSGLSTTELLKEAGDDFYKQAQFESAINKYTECLDSLPDK---TSQLALKCYSNRSACYKQLSNFDGTVADTTAVLEVEPNNVKALMRRAQAFEAIER 1025
CL L + + QGNQFFK+G + AIAKY EA +D + Y+SN +A + L Q A A+ CIK +K+FVKGYFRLA+A++ D+ G + L+ GLAV+ N DLK+ K+V+++ R E+VAS AE QMQ+ D A +T E RLDA NP + R+M + +P++EA E R++GLS+TE+ KE GD+ YK A FE A+ Y +C++ L + S+LALK +SNR+ACYKQ+SNFDG + D TAVLE+EP NVKAL+RRAQAFE +ER
Sbjct: 37 CLRPRTLLPTMPNPQAEALKGQGNQFFKSGQYAQAIAKYKEATSIDSNVPAYWSNMAACFEKLGQHENMADAARSCIKADKNFVKGYFRLATAQKHMNDIAGCIKTLESGLAVQSSNPDLKKMKKDVQELQRGEQVASYCRKAEEQMQSGDIPGAYKTLELASRLDAGNPDIERMMSKVKPKFEAMESRRKAGLSSTEIFKERGDEAYKSANFEGAVELYGKCIEGLKREGKDQSELALKAHSNRAACYKQISNFDGVIEDCTAVLEIEPENVKALIRRAQAFEGVER 324 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1587.1 >prot_S-ischiensis_contig10.1587.1 ID=prot_S-ischiensis_contig10.1587.1|Name=mRNA_S-ischiensis_contig10.1587.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=341bp MLRLAVTSAPTSLFGSQGNQFFKNGDFQNAIAKYTEAIELDPSNHTYFSNback to top mRNA from alignment at S-ischiensis_contig10:2915667..2923651- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1587.1 ID=mRNA_S-ischiensis_contig10.1587.1|Name=mRNA_S-ischiensis_contig10.1587.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7985bp|location=Sequence derived from alignment at S-ischiensis_contig10:2915667..2923651- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:2915667..2923651- >mRNA_S-ischiensis_contig10.1587.1 ID=mRNA_S-ischiensis_contig10.1587.1|Name=mRNA_S-ischiensis_contig10.1587.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2046bp|location=Sequence derived from alignment at S-ischiensis_contig10:2915667..2923651- (Schizocladia ischiensis KU_0333)back to top |