mRNA_S-ischiensis_contig10.1585.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI) HSP 1 Score: 203 bits (516), Expect = 4.760e-58 Identity = 100/161 (62.11%), Postives = 123/161 (76.40%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIVHPSTG-RTVLHTGDFRADSTLCAHPLLASLRGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVAR 480
TTGL F G I+ S TA L+V+LM V+R RVV LP++ P +AGFD+TL+DA+HCP AVMF+I P G RT LHTGDFRA ++C +P++ SL+GR+D+LYLDTTYC PRH FP Q+EVL + LV+ EL RDP TLFLVGTY IGKEKVLEAVA+
Sbjct: 41 TTGLYKSFSAGKIYCSHGTANLIVELMGVNRERVVALPMDTPVLVAGFDLTLIDANHCPAAVMFVIRDPRPGGRTTLHTGDFRAAESVCRNPVVKSLKGRLDSLYLDTTYCGPRHTFPDQSEVLAQATQLVRMELQRDPNTLFLVGTYSIGKEKVLEAVAK 201
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A8J5XFD5_DIALT (SWIM-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFD5_DIALT) HSP 1 Score: 177 bits (449), Expect = 7.250e-48 Identity = 99/192 (51.56%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIVHPSTGRTVLHTGDFRADSTLCAHPLLASL--RGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDSLYVMG 570
T GL F GTI+ S+ TA LV+ + VD RVV L L+E + + G ++T DA+HCPGAV +P TG T LHTGDFRA+ +C P LA L G VD L+LDTTYC+PR RFP QA VL + L + ELAR+P TLFL+G+Y IGKE+ + A+A A GS VS +AR LRL G W D V G
Sbjct: 44 TVGLNASFCAGTIYCSQITANLVIAVGLVDAKRVVALALDETSLVDGVEVTPFDANHCPGAVCLHFRNPRTGATALHTGDFRAERCVCESPTLARLLAAGPVDTLFLDTTYCAPRWRFPAQAAVLASLRDLARAELAREPLTLFLIGSYEIGKERAVFALASALGSPVDVSDARARKLRLCGWWRDGWVVTG 235
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A7S0XC76_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XC76_9CHLO) HSP 1 Score: 159 bits (402), Expect = 1.490e-43 Identity = 88/184 (47.83%), Postives = 117/184 (63.59%), Query Frame = 1
Query: 37 IFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFD-----ITLLDAHHCPGAVMFLIVHPSTGRTVLHTGDFRADSTLCAHPLLASL---RGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDSLYV 564
I S TAAL+ ++M V + V +P+ + + D +TLLDA+HCPG+V+ +H TG TVLHTGDFRA + P L L G V L LDTTYCSP+ +FP QA+V + +V+ EL R+P TLFLVG+Y IGKE+ + AVARAAGSR V +AR L+L+G WDD L++
Sbjct: 15 IVCSPVTAALLTNVMGVKAAMVRAVPVGDTVEVCTADGATARVTLLDANHCPGSVLLHFLHTGTGHTVLHTGDFRAARCVREDPQLHELIAAHGPVGELLLDTTYCSPQWKFPDQADVCRAMAVVVRAELQREPRTLFLVGSYQIGKERAVAAVARAAGSRAGVGWHRARTLKLSGWWDDDLFL 198
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A7S4RRU6_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RRU6_9DINO) HSP 1 Score: 159 bits (402), Expect = 1.130e-41 Identity = 89/183 (48.63%), Postives = 116/183 (63.39%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIVHPSTGRTVLHTGDFRADSTLCAH---PLLASLRGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAG 540
T GLT F +G I+ S TA LV + ++V+ +RV LPLEEP +AG +TL+DA+HCPGAV+FL H +TGRTV+HTGD RA + + L A G V L+LDTTY S R P Q EVL +GAL EL + P TLF+VG+Y IGKE+ A+ RA GS S+R+ ++L G
Sbjct: 67 TVGLTRHFSEGVIYCSPVTARLVREFIQVEPARVRELPLEEPVEVAGVRVTLVDANHCPGAVVFLFHHLATGRTVVHTGDVRAAECVRSGLQAQLQAQGLGSVHELFLDTTYASSRWDLPPQPEVLRELGALCAEELRKQPRTLFIVGSYQIGKERAAAAIGRAVGSSVCASSRRYQMLEACG 249
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.060e-40 Identity = 87/193 (45.08%), Postives = 111/193 (57.51%), Query Frame = 1
Query: 7 GLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIVHPSTGRTVLHTGDFRADSTLCAHPL--LASLRGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDSLYVMGNQG 579
GL F GTI+ S+ T AL+V + V V LPLE+P I G ++TLLDA+HCPGAVM L + T T+LHTGDFRA L L RV LYLDTTYC+ ++ FP Q VL + + + E A P T+F VGTY IGKE+ + AVA G + K R LRLA WD+ ++V +G
Sbjct: 43 GLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTNTTILHTGDFRASEALTERTASWLRDRDLRVRTLYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIG-KVYADKHKERTLRLASEWDEEVFVSEMEG 234
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A7S2WP51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP51_9STRA) HSP 1 Score: 144 bits (362), Expect = 6.460e-40 Identity = 80/153 (52.29%), Postives = 95/153 (62.09%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIVHPSTGRTVLHTGDFRADSTLCAHPLLASL--RGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGK 453
TTGL FD GTI+ SE TA LVV + V V LPL E + G + +DA HCPGAVMF P+ GR VLH GDFRA+ + P LA+ RG +D LYLDTTYC P H FP Q VL V A+V+ EL ++ TLF+VGTY IGK
Sbjct: 45 TTGLHAGFDLGTIYCSEVTARLVVHDLGVASKLVCVLPLHEWTTVEGVHVMPVDACHCPGAVMFFFDDPTAGRRVLHCGDFRAEECVVESPHLAAALARGPLDELYLDTTYCRPTHTFPDQPAVLRDVEAIVRHELGQERRTLFVVGTYQIGK 197
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: I0YMI9_COCSC (DRMBL-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMI9_COCSC) HSP 1 Score: 147 bits (371), Expect = 7.170e-40 Identity = 82/195 (42.05%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIVHPS------TGRTVLHTGDFRADSTLCAHPLLASLRGRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDSLYVM 567
TTGLT F GTI+ S TA L+V M ++ S + LPL P + G ++TL+DA+HCPGAV+FL P + + +LHTGD R + HP L + R +D L+LDTTY SP+H FP Q + + + ++K E PGTLF++G+Y IGKE+ A+A G + V+A K RVLRL G+ ++ + ++
Sbjct: 31 TTGLTTSFSSGTIYCSAVTANLLVKDMHINPSCIQPLPLNIPLLVDGINVTLIDANHCPGAVLFLFKTPPPPGSEFSEQVILHTGDMRWHPRMGRHPALKNQR--IDMLFLDTTYASPKHVFPCQEDAIADIVRVMKQEAKARPGTLFIMGSYRIGKERAYLGAAKALGWKVHVNADKLRVLRLLGLPENDMALL 223
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A812VXA3_9DINO (SNM1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812VXA3_9DINO) HSP 1 Score: 151 bits (382), Expect = 7.720e-39 Identity = 91/197 (46.19%), Postives = 122/197 (61.93%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIV--HPS----TGRTVLHTGDFRADSTLCAHPLLASLRGRVDA-LYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDSLYVMG 570
T GLT +FD GTI+ ++ TAAL+ ++M VD +RVV LPL++P ++ G +T +DA HCPG+ M + H S T VLHTGD RA + + L+ L GR A L+LDTTYC+ R FP Q E + L EL R+P TLF+VG Y IGKE+ +AVA AAGS V R+ +V++LAG W D+ G
Sbjct: 43 TVGLTRNFDCGTIYCTDVTAALITEMMGVDAARVVALPLQQPLQVQGVWLTFVDAGHCPGSAMAVFEEDHSSGSSATQSVVLHTGDCRASAQI-RDGLMEWLAGRTVAELFLDTTYCARRWTFPAQQEACSWLAELTAAELQREPKTLFVVGCYQIGKERAAQAVAEAAGSSVFVEQRRWKVIQLAG-WGDACLKSG 237
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A4S4W7_OSTLU (Lactamase_B domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S4W7_OSTLU) HSP 1 Score: 145 bits (367), Expect = 8.270e-39 Identity = 89/204 (43.63%), Postives = 119/204 (58.33%), Query Frame = 1
Query: 7 GLTGDF----DKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAG-------FDITLLDAHHCPGAVMFLIVHPSTGRTVLHTGDFRA------DSTLCAHPLLASLR-GRVDALYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDSLYV 564
GL+G F D+ I+ SE TA LVV+ + V R RVVG L + G + T +DA+HCPGA + + TG T+LHTGDFRA D TL LL + R G VD + LDTTYC + FP Q VL ++ + + ELAR+P TLFL G+Y IGKE+ ++AV + A SR V+AR+ + L L+G W D +V
Sbjct: 46 GLSGSFGKDGDEAKIYCSEITARLVVEFLGVKRERVVGCELGRGTTLRGAGTRGDDVEATFVDANHCPGACLVFFRNKITGETLLHTGDFRAAARVRNDGTL--RELLTTCRDGSVDEVMLDTTYCEKKWTFPDQDVVLNKMRQIARDELAREPRTLFLCGSYSIGKERAIQAVCQGAQSRASVTARRKKSLELSGWWRDDAFV 247
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Match: A0A812Y568_SYMPI (Dclre1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y568_SYMPI) HSP 1 Score: 151 bits (381), Expect = 1.020e-38 Identity = 91/193 (47.15%), Postives = 122/193 (63.21%), Query Frame = 1
Query: 1 TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDITLLDAHHCPGAVMFLIV--HPST-----GRTVLHTGDFRADSTLCAHPLLASLRGRVDA-LYLDTTYCSPRHRFPGQAEVLERVGALVKWELARDPGTLFLVGTYGIGKEKVLEAVARAAGSRCLVSARKARVLRLAGVWDDS 555
T GLT +F+ GTI+ ++ TAAL+ ++M VD +RVV LPL++P ++ G +TLLDA HCPG+ M + H S+ G VLHTGD RA + + LL L GR A L+LDTTYC+ R FP Q E + L EL R+P TLF+VG Y IGKE+ +AVA AA S V R+ +V++LAG W D+
Sbjct: 43 TVGLTRNFECGTIYCTDVTAALITEVMGVDATRVVSLPLQQPLQVQGVWLTLLDAGHCPGSAMAVFEEDHSSSESSTKGSVVLHTGDCRASAQI-RDGLLEWLAGRTVAELFLDTTYCARRWTFPAQHEACNWLAELTAAELQREPKTLFVVGCYQIGKERAAQAVAEAAASSVFVEQRRWKVIQLAG-WGDA 233 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1585.1 >prot_S-ischiensis_contig10.1585.1 ID=prot_S-ischiensis_contig10.1585.1|Name=mRNA_S-ischiensis_contig10.1585.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=199bp TTGLTGDFDKGTIFTSEATAALVVDLMEVDRSRVVGLPLEEPARIAGFDIback to top mRNA from alignment at S-ischiensis_contig10:2907760..2909250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1585.1 ID=mRNA_S-ischiensis_contig10.1585.1|Name=mRNA_S-ischiensis_contig10.1585.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1491bp|location=Sequence derived from alignment at S-ischiensis_contig10:2907760..2909250+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:2907760..2909250+ >mRNA_S-ischiensis_contig10.1585.1 ID=mRNA_S-ischiensis_contig10.1585.1|Name=mRNA_S-ischiensis_contig10.1585.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1194bp|location=Sequence derived from alignment at S-ischiensis_contig10:2907760..2909250+ (Schizocladia ischiensis KU_0333)back to top |