mRNA_S-ischiensis_contig10.1378.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A7S3UXL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXL7_HETAK) HSP 1 Score: 85.5 bits (210), Expect = 2.880e-14 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPEVTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADAQPP 709
+V FGL FR E FMSRC++CN +GF ++ +EA R V P +L V+EF++C GC K++W+GPK ++ K S ++E + P
Sbjct: 332 EVVRHFGLVFREEDFMSRCAVCNMKGFAVIAREEAERRG-VKPKVLAKVAEFFECTGCGKVYWEGPKFSTACEKFSCFLEDSSTKP 416
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A7S0S0Y2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S0Y2_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 8.530e-13 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPEVTPAILGMVSEFYQCRGCHKIFWDGPKSASIV 667
+VA +G+TF MSRCS+CN+ F L+P + R+ P V P +L +V EF+QC GC K+FW GPKS S +
Sbjct: 106 EVARQWGITFDTATAMSRCSVCNAADFRLLPRE--RAAPHVPPKVLAVVDEFWQCGGCAKVFWMGPKSYSAI 175
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: H3GHZ0_PHYRM (Mut7-C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHZ0_PHYRM) HSP 1 Score: 73.6 bits (179), Expect = 9.940e-12 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPE--VTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADA 700
++ F L E+ MSRCS CN++GFD+V L R++ E V P +L +V+EF+ CR CHKI+W+GPK S L + + ++
Sbjct: 78 EIKAHFALKLVKEEMMSRCSRCNAKGFDVVDLDFVRNQTEDAVHPNVLEVVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDENS 162
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A662WZY2_9STRA (Mut7-C domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZY2_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.980e-11 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRP--EVTPAILGMVSEFYQCRGCHKIFWDGPKS----ASIVRKLSKYVEADAQPPCSAS 721
++ F L E+ MSRCS CN++GFD+V L R++ EV P +L +V+EF+ CR CHKI+W+GPK A+++R + + Q P +A+
Sbjct: 181 EIKTHFALRLVKEEMMSRCSRCNAKGFDVVDLDYVRTQTADEVHPNVLEVVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDDHSIVEPQHPPNAA 276
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A7S2IFC6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IFC6_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 4.730e-11 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 2
Query: 437 RTLAAQVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPEVTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADAQPPCSAS 721
R V FGL ++FM RCS+CN RG+ +EA R + P + MV EFY CR C K++W+GPKS + S A SAS
Sbjct: 310 REQLRSVVSHFGLRLSADEFMMRCSVCNGRGYYKCEKEEAAKREDCPPRVAEMVDEFYVCRSCGKLYWEGPKSNNAFDHFSSVFNGFAAVSTSAS 404
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A225WXL1_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXL1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.380e-11 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPE--VTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADA 700
++ F L E+ MSRCS CN++GFD+V L R++ E V P +L +V+EF+ CR CHKI+W+GPK S L + + D+
Sbjct: 859 EIKTHFALKLVKEEMMSRCSRCNAKGFDIVDLDYVRNQTEDEVHPNVLEIVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDEDS 943
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A662X4K9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4K9_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 6.670e-11 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRP--EVTPAILGMVSEFYQCRGCHKIFWDGPKS----ASIVRKLSKYVEADAQPPCSAS 721
++ F L E+ MSRCS CN++GFD+V L R++ EV P +L +V+EF+ CR CHKI+W+GPK A+++R + ++Q P A+
Sbjct: 720 EIKTHFALRLVKEEMMSRCSRCNAKGFDVVDLDYVRTQTADEVHPNVLEVVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDDHSIVESQHPSPAA 815
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: A0A329RI35_9STRA (3'-5' exonuclease domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RI35_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 7.410e-11 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPE--VTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADA 700
++ F L ++ MSRCS CN++GFD+V L RS+ E V P +L +V+EF+ CR CHKI+W+GPK S L + + D+
Sbjct: 957 EIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRSQTEDEVHPNVLEVVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDEDS 1041
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: W2IDV0_PHYPR (3'-5' exonuclease domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2IDV0_PHYPR) HSP 1 Score: 74.7 bits (182), Expect = 1.510e-10 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPE--VTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADA 700
++ F L ++ MSRCS CN++GFD+V L R++ E V P +L +V+EF+ CR CHKI+W+GPK S L + + D+
Sbjct: 676 EIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDEDS 760
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Match: W2PQF7_PHYPN (3'-5' exonuclease domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2PQF7_PHYPN) HSP 1 Score: 74.7 bits (182), Expect = 1.720e-10 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 452 QVAELFGLTFRPEKFMSRCSLCNSRGFDLVPLQEARSRPE--VTPAILGMVSEFYQCRGCHKIFWDGPKSASIVRKLSKYVEADA 700
++ F L ++ MSRCS CN++GFD+V L R++ E V P +L +V+EF+ CR CHKI+W+GPK S L + + D+
Sbjct: 952 EIKTHFALKLVKDEMMSRCSRCNAKGFDVVDLDYVRNQTEDEVHPNVLEVVTEFWVCRVCHKIYWEGPKYDSNYANLLRMFDEDS 1036 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1378.1 >prot_S-ischiensis_contig10.1378.1 ID=prot_S-ischiensis_contig10.1378.1|Name=mRNA_S-ischiensis_contig10.1378.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=167bp MSRCSLCNSRGFDLVPLQEARSRPEVTPAILGMVSEFYQCRGCHKIFWDGback to top mRNA from alignment at S-ischiensis_contig10:1351252..1353386- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1378.1 ID=mRNA_S-ischiensis_contig10.1378.1|Name=mRNA_S-ischiensis_contig10.1378.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2135bp|location=Sequence derived from alignment at S-ischiensis_contig10:1351252..1353386- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:1351252..1353386- >mRNA_S-ischiensis_contig10.1378.1 ID=mRNA_S-ischiensis_contig10.1378.1|Name=mRNA_S-ischiensis_contig10.1378.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1002bp|location=Sequence derived from alignment at S-ischiensis_contig10:1351252..1353386- (Schizocladia ischiensis KU_0333)back to top |