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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1080 |
| Cds size | 915 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815492.9690993-UTR-S-ischiensis_contig10:483310..483473 | 1622815492.9690993-UTR-S-ischiensis_contig10:483310..483473 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 483311..483473 + |
| 1695739733.3568869-UTR-S-ischiensis_contig10:483310..483473 | 1695739733.3568869-UTR-S-ischiensis_contig10:483310..483473 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig10 483311..483473 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815493.017407-CDS-S-ischiensis_contig10:483473..483682 | 1622815493.017407-CDS-S-ischiensis_contig10:483473..483682 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 483474..483682 + |
| 1695739733.3708918-CDS-S-ischiensis_contig10:483473..483682 | 1695739733.3708918-CDS-S-ischiensis_contig10:483473..483682 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 483474..483682 + |
| 1622815493.0311182-CDS-S-ischiensis_contig10:486161..486428 | 1622815493.0311182-CDS-S-ischiensis_contig10:486161..486428 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 486162..486428 + |
| 1695739733.3868778-CDS-S-ischiensis_contig10:486161..486428 | 1695739733.3868778-CDS-S-ischiensis_contig10:486161..486428 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 486162..486428 + |
| 1622815493.041669-CDS-S-ischiensis_contig10:489485..489924 | 1622815493.041669-CDS-S-ischiensis_contig10:489485..489924 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 489486..489924 + |
| 1695739733.3974018-CDS-S-ischiensis_contig10:489485..489924 | 1695739733.3974018-CDS-S-ischiensis_contig10:489485..489924 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig10 489486..489924 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1273.1 >prot_S-ischiensis_contig10.1273.1 ID=prot_S-ischiensis_contig10.1273.1|Name=mRNA_S-ischiensis_contig10.1273.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=305bp
MLKRSVLLLEDVLETARLEGTPDGGVPRAVGDVRGGSRAVEQLDRLFRVG
QAHRSGYRPQSPRGKGGRRSEGEWRAKPRHGRASLEDRPQASASGAGTST
RTRLPDGAVLGLRSPGRPEGGHGGGGGGGAGAGGGGGDSGCGGAGAAAGQ
DQALHALERMGAQLTESRAANKRIMWERDQACARLTLLQAQMQGIALGPD
SGRERGTGGGFTAAPAPDSPKGRRGFYAAPPEADTAAVLPAGSTGGAPGT
DSTVPSAFGFAAQEPAPDPRAPATAAGDGAGAVGQPGPKPPPPLPWPETA
AAAGP back to topmRNA from alignment at S-ischiensis_contig10:483311..489924+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig10.1273.1 ID=mRNA_S-ischiensis_contig10.1273.1|Name=mRNA_S-ischiensis_contig10.1273.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6614bp|location=Sequence derived from alignment at S-ischiensis_contig10:483311..489924+ (Schizocladia ischiensis KU_0333)
GCCTCATCGCAGGGAGGGTCTAACTCGAGTTGTCGCTGCAGGGTCTGGTG
CTGGGATACCCGGGGTGGCAGTGGCGGGGGGCGCGTCACCTGCCGCGGAA
GACGTACTGTAGGTAGCTCTATGGCGTGATTTGCCCCCCGGAATTGCTTT
GATCCCCCAGCCCATGTTGAAGCGGTCAGTGCTGCTGCTGGAGGATGTGT
TGGAGACGGCCCGCCTGGAGGGAACACCTGATGGTGGGGTTCCGAGGGCA
GTGGGGGATGTGCGCGGTGGGAGCCGAGCCGTGGAGCAGCTGGATCGCTT
GTTCCGAGTCGGACAGGCGCACCGATCAGGATACCGGCCGCAGTCACCCA
GAGGGAAAGGGGGGCGGCGAAGGTGCGCGCAGGGAGATGGAAAGACGAAG
GGGCTTCGTACTTTCATTCAAAACCACAGTTCCTACCGGATGTTGTGTGA
CACTCAGTCATGCAAAATTGTGCCAACCATCGCCTCAACACATGACTCCG
CCGTGCCAACACCAGAAAGTGCCCACACCTTAAGATACCTGGTCTGTGGG
GGAGGTTGTTGCCATCTTCCGTTGTACCGATTGTGCTGGCGCTGATTTCT
GGGTGCACTTGCTTCACACTTCTATTTGAGTGGCAGATAAGCGGCGAGTT
CCAGGCCCCTTGCCAAAAGGCTCGTCCCAAAACAGGACTCAACGGAAGCC
CTTCCTTCCCTCGCAGGGCAAGAAGAAAACATTAAAATGTGATTTTTCAT
TCGCATGTGAGTACTCTGCATGCGGTCAGATCGATGAAGGCTCTCTCACA
TGCCGTCCAAAAGGTCAGCTCGCACGTTTCAGTTGGTTGGCTGCACGCTG
CCGCCGCAGACGTGCTTGCCGTTCGGTGGAACAATGAGGACCCATTGGAA
AAGCAGAAGTGATGTCCCCGCCAGTCATTGGTTGCGTATCAGTCAGGCGC
CAGCAACCGGCGTTTCCATGCAAACCACGGATCACGCCAACCCGGCACCA
ACGACCGGTGCTTCTTCAGCAAACCGCGGATCAACCACACTAGGCCACTG
CCCAGCAAGCGCCCCTGAAAAACTAACGCAACCTGGAGCTGGCATGACAT
GAATGGCCATTTCATTCATAGATCTACGCATTCCCGGCACTTGTCCGCGG
CGTGCCCGCTGCACGGGAGCACTTCTCGGTACTGTTTTGCCATTCAAAGA
AGGATACGAATGCGGCGATTCATGGGGGCCGTGGAGTCCATTGATCGCCA
ATGGTCGCGAGCACTTGCCCTGAAATGTGCCCAGCTGTTTTCGTGAATAT
GCCGCTCTATGCTGCTCCACCCCGGTCGAGTCGCATGGTCAGTGGTCTCG
GGACTCTGTGGCAAGAACAGTATGAGCAATACGAGCAAGAGTACATATGT
CGGGACTGCGGCAGGTACAATGCGAGCATATATAGATGTAGAGAGAGAGA
GCCATCATTCCAAGTATATACTTCTACAGTAGGTACGCAAGCACCGTGGT
TATGCATATACGTACTGTAGTAAATATATGTACTCTGGCGGAGGGGTGGC
CACCCCCTCCCACCCTGGCTCTGCCAGGGGATGGAGGGGTCCTGCTCTGT
CTCGTCCGAGGCGCGGGGTCAATGGTCTCGGGACTACGGCAAGCACCACG
TGAGTACATATATAGAGACCATTGACCCTGCGCCTCGGACGAGACGGAGC
AGGACCCCTCCCTCCCCTGGCAGAGCCAGGGTGAGAGGGGGAAGAGGCGG
AGGGGTGGCCAAGTCCATATACTTGGGAGGTACGAGTACTTCCAGAAGCA
CTTTGAACGAGCTTGTGTACTTCCGAAGGAAGCAAGGTACCCGAGTTGTG
CTTGCGTACAGATATGCATTGTTCTGACGTCATGCTTGCCGCAGTCCCGA
GACCATTGACCGTTGCTACAGTCTATATGTAGAGCTGCTCACATTGTGCT
TGCCGTAATCCGGATACCACTGACCGCGCGCCTCAGCCGAGACGGAGCAC
TGTTTAGGAAACGACCCGCTGAAGAAGAAATCGAGGTTTTGTACAGCACA
TTGGAACAACCACATGCCGGACCAAGGGCCGGCTCAGTTTTCATAGTACC
GGGCCTATACCGGGCCCACGGGGCTGAGATTTTCTATATTTGCCACGGGC
TGGGCCACGGTCCGCGCAAGTTTTCACAGTTTGGGCCCATAGCGGGCTCG
CGGGCCTATGATTTGCCAACCTACCCGTCACAGCCCGGCCCGGTACTTGC
CCGGTACTGTAAACCTGGCCATTTCGGGCAGAAATGCACAATTTTGAGGG
ATTTCATTGATTTTGACCTTGATTTTTCACGGGTCATGTCACGGGCCGGG
CCAGCACCGGGCTCACGGGCACATTATTTTCCAATTTGCCGACCAGTGTA
TATATATACGTACTCACGTGGTGCTTGCCGTAGTCCCGAGACCATTGACC
CCGCGCCTCGTTCGAGGTGGAGCAGGACCCCTCCCTCCCCTGGCAGAGCC
AGGGTGGGAGGGGGTGGCCACCCCCCCGCCAGAGGCGGAGTACGTTATAT
ACTTCCAAGTACTTCGAAGTACTGTATACATATACTTCCAAGCACTCAGT
ACTTGGCAGTATATGTATACTCGTGCTACGTATATATGTGCTTTGAAGTA
CTGTACTGTGAACCCGGCCCGGTGCCGGTGCTGTGTAACACCTAGGAAGG
AGCGGCACGCTACTGCTGCGCCGCAAGGCAGGCCCTCGAGTGCTCGTGTA
CAGCAGGTAGAGCAGAGTACTTGTGCTTCGAAGTACTTGGGAAGTGCTGT
ACTTCCAAGGACTAACCGAGGCCCCGCGCCTGCGCCTGCTGTTGCCGCCA
GCGAGGGCGAGTGGAGAGCGAAGCCACGCCACGGGCGGGCAAGTCTCGAG
GATCGCCCGCAGGCCAGTGCCAGTGGCGCAGGCACCAGTACCCGCACACG
CCTGCCAGACGGAGCGGTGCTGGGGCTTCGGAGCCCGGGTCGGCCCGAGG
GCGGCCATGGTGGCGGCGGTGGCGGTGGCGCTGGCGCTGGCGGTGGTGGT
GGCGATAGCGGCTGCGGTGGTGCTGGAGCTGCCGCGGGCCAGGACCAAGC
CCTGCATGCGTTGGAGAGGTGAGCATTCGCCCCGGGGGTGTTGTACAGCT
CTACGAATACTCGTACACGTATACTTCGTATATGCCAGTATGTATATATG
TACTCAACGTGGTGCTTGCCGTAGTCCCGAGACCATTGACCACGCTCCTC
AGTCGAGACGGAGCAGGACCCCTTATATATACAAGTACAAGTATTTAGAG
TATATACTACGAGTACTTCTATATATAGAGAGAGTAGTGTATATGCTTCG
AAGTATAAATATGTACTCGTACTCGCGTTGTGCTTACTGTAGTCCCGAGA
CCGTTGACTGTGCGCCGTTGACGGTGGAGCATTCTCCCTCCTGCCTCTGG
CAGGCCAGCGTGGGTGGGAGGGACCACCCCCGCACGCGTGGCGGGGGAGT
CGTTGGGGTACTCATGCTTGAAGTACACATATGCAGTACGTGCTCACGTT
GTGCTTGCCTTCATCCTGAGACCACTGACCACGGGCCTCGGCCGACTACA
ATATATACTGTATGGAGCAGATGCAGCCGAATCTTACACATATGTACAAG
TACTGCAGTGCATACTACTGTACCGGACAGTACATAGTACTTCAGTAGTA
CTTCCGGAAGTGCGTACTCGTGCAGTACGTTTTGTGCTTGGGGCTATTGA
CCGAGCATTGGGGGGTTCTACAAACGCGGCAGCACTGCACATTTGAGCGC
TTTGAATTCTTGACCGTGTGTTTGTTGTCGAGCTTCGTTATTATTGCAGG
TACAGCGGTGCAGCACTGTGGTGGGTACTGTACTTTGGCGCTTCAAAGAG
CGCATTTTTGTGTCGTGCTGTAAATCTTTGCGGTGATAAGAAACCGCCAC
CCGTTTAATTTTTATTCCGCGGCAGGGGAAAACCTCCGCCGTGCTTTTGA
CCTAAACATTAGCACTTCACAGACGACAACACGGACAAACACACATGTGC
GTACGCACGCACGCACACACGCGCGCACACATGTGGACACGGCCTTGCAC
CAACACAGGACCACTGGCATGCATTGTCCGATTGCCTCGTGCGTTGCTTT
CGCCCCGGCTGACATATGAATCATATGATGCGATTGGCTACTTGCAGCAC
AGGACTTCTACGTCCAAGCACTTGCAGTCAGCCAAGCGAGTTTTACACTA
AGTGCAGCAACCAAGCATTGAAAGCATTGAATTATAGTACGAGTACTCCA
TAGCACGTGCTAATCTGTTTCATTAGTCTGGACGCAGTTTTCGGCGCTCC
GTAGCGCGCAACCAGGTGCCCGTCGGGTGAGCATCTCTTGAGCGAAATGA
TAGTCCCAAAGGTCCTCTTTCCGATGGTATGTTCACCATTGCCCGGATCG
CAGTTCCCGATGAGATACCGATCGTCAAAGTTGGGCACTTTTCGGCCCTT
TTCGGCGGTATAGTGATACCGATCAGTCGGTATATGGAGACTTGGAAGCT
GGCCGACTAGTGAAAGTGCCGATCGCGGTGGGTTCTAGCGTTGTGCAAAG
TTTCGTGGTCAGATTCTATGCGGTTGAGGTGCTCTTCCCAGTAGTCATGC
CAATATTTCGTCGATTTTCGGGGCCAAGTCTGGGAGTTCCCCCTGTGAGC
TCCGAAAAGGTGACAAATGTCTTCAAAGCACTCTGTATTAGGATGCAGGC
AGGGCTGGCCCAAACAGTGCCAATCCACCCATGCAAGTTGTCTATTTTTA
CGTGAAGATCCCTACCGACGATCGGAATCGAAATCGGAGCCGTGCAGCCC
GAGATATCGGGCAGGTTTGGCATCTCCAGGTGACACGACATGGGCAATTT
TGCCGTTTTTTAATTTTCGCCACATCAAATATCTCGAGAACGAAGACGAT
TTGGGCAACATGGCAAAGGGCAACATGATCCGAAAAACTGCAAGATTTCC
GAATCCGGCGTCCATTTGATCATGTGACCCCCAAACCATTCAACAGCTAT
ACACAAGTGCGAACATACTTTAGGAACGGAGGACATACTGTAGTAGTACT
TGCAGTAGCAGGTTCAGCCAGTACTGTACTTCACCCGCGCATGCACACAT
GTTTCGACACATTTGCTTGGGCTCCTTGTCACTAGCCACGTGCTTCGGGC
GGCGAGGGGTCGGCGCTGACAGCGTTCGCTCAAGCTCGCCAGTACTCTAC
TGTACACTTTGCAGCGCAAGTGAATCTGTGTACAGCCCAGCACAGCACAG
TACGTGCAGAACTGTACAGCAAGTTACTGTACTTGACATGCTTGCGGTTT
GTAGTGTGTTGTGCTATGCAGTACCGTATGTACTTCGAAGTACTTCGTAC
TTCGAAGTATACGGTACCGGATAACTGGTGCTGGTAGTTGTATACGTCGT
ATATATGGCAGGGACTGTACCTGCTGAACCTGTTACAGTAGTGCGCGCAT
GTCCAACCCCACCCTGCCTTTGCGTGTGGCGTTAGGTTGGTGAACATTAC
ATGCATGTTAGATACGTGTTCGTCACCGACAGTCGCGACACTCCACGGTG
CCACACACCTCCCATTTGTACAGTACTGCTCCGAAGTGAGTGCTACCATG
CACTTCGAAGTAGTACTTCCGGGGAGTACTTGGAAGTACTACTCGTATGA
GTACTACTGCACGAGTGCACGGAGACGGCGACTACAGAACACACTACATG
CTTTGCTACTGCTGCTGCTGCTGCTACGGCACTCGTACTACATCTACACA
AGACTACTGCACTACTGTACAGTACTACTCTGCTGCTGCTGCGCTGTTGC
TGTAGTACTCGAGTACACACACGGCTACCACTACGGCAGTAAGAGCCAAG
ACTCCTTGCACAGCGTAGACTACTTGTACTCCACACACTCGCAGGGGATG
GCAGCAGGAACGCCTGTTGGAGCACACCCGCTTTTGCGCCCCACCTTGCG
CCCCCCCAAGTGCCAGGATACATACTAGCTCTAGAGCTCTAGTACTTGTG
CTTTCTTGCACTGCCAAGTACTGCTGTCGCACGGGCCCTGCCCACCAGCT
CACCACCCGACCCACCCACCCACCCACCCACCCACCCACCCACCCAACCC
TCCACGTGAACGGCGCTGCGCACAGAATGGGCGCACAGCTGACAGAATCA
AGGGCTGCCAACAAGCGCATCATGTGGGAGCGCGACCAGGCCTGCGCCCG
CCTCACGCTCTTGCAGGCCCAGATGCAGGGGATCGCACTGGGGCCAGACA
GCGGTCGCGAGCGCGGCACTGGGGGCGGCTTCACCGCCGCCCCCGCCCCC
GACAGCCCCAAGGGCCGCAGGGGCTTCTACGCCGCCCCGCCGGAAGCAGA
CACAGCCGCCGTGTTGCCTGCAGGCAGCACGGGTGGGGCGCCGGGGACGG
ACAGCACGGTACCGTCGGCCTTTGGCTTCGCCGCCCAGGAGCCGGCGCCT
GACCCCCGAGCTCCCGCCACCGCTGCCGGCGACGGGGCGGGGGCCGTTGG
GCAACCGGGGCCGAAGCCGCCGCCGCCACTGCCGTGGCCAGAGACGGCAG
CAGCGGCCGGGCCG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig10:483311..489924+ >mRNA_S-ischiensis_contig10.1273.1 ID=mRNA_S-ischiensis_contig10.1273.1|Name=mRNA_S-ischiensis_contig10.1273.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1830bp|location=Sequence derived from alignment at S-ischiensis_contig10:483311..489924+ (Schizocladia ischiensis KU_0333)
ATGTTGAAGCGGTCAGTGCTGCTGCTGGAGGATGTGTTGGAGACGGCCCG
CCTGGAGGGAACACCTGATGGTGGGGTTCCGAGGGCAGTGGGGGATGTGC
GCGGTGGGAGCCGAGCCGTGGAGCAGCTGGATCGCTTGTTCCGAGTCGGA
CAGGCGCACCGATCAGGATACCGGCCGCAGTCACCCAGAGGGAAAGGGGG
GCGGCGAAGATGTTGAAGCGGTCAGTGCTGCTGCTGGAGGATGTGTTGGA
GACGGCCCGCCTGGAGGGAACACCTGATGGTGGGGTTCCGAGGGCAGTGG
GGGATGTGCGCGGTGGGAGCCGAGCCGTGGAGCAGCTGGATCGCTTGTTC
CGAGTCGGACAGGCGCACCGATCAGGATACCGGCCGCAGTCACCCAGAGG
GAAAGGGGGGCGGCGAAGCGAGGGCGAGTGGAGAGCGAAGCCACGCCACG
GGCGGGCAAGTCTCGAGGATCGCCCGCAGGCCAGTGCCAGTGGCGCAGGC
ACCAGTACCCGCACACGCCTGCCAGACGGAGCGGTGCTGGGGCTTCGGAG
CCCGGGTCGGCCCGAGGGCGGCCATGGTGGCGGCGGTGGCGGTGGCGCTG
GCGCTGGCGGTGGTGGTGGCGATAGCGGCTGCGGTGGTGCTGGAGCTGCC
GCGGGCCAGGACCAAGCCCTGCATGCGTTGGAGAGCGAGGGCGAGTGGAG
AGCGAAGCCACGCCACGGGCGGGCAAGTCTCGAGGATCGCCCGCAGGCCA
GTGCCAGTGGCGCAGGCACCAGTACCCGCACACGCCTGCCAGACGGAGCG
GTGCTGGGGCTTCGGAGCCCGGGTCGGCCCGAGGGCGGCCATGGTGGCGG
CGGTGGCGGTGGCGCTGGCGCTGGCGGTGGTGGTGGCGATAGCGGCTGCG
GTGGTGCTGGAGCTGCCGCGGGCCAGGACCAAGCCCTGCATGCGTTGGAG
AGAATGGGCGCACAGCTGACAGAATCAAGGGCTGCCAACAAGCGCATCAT
GTGGGAGCGCGACCAGGCCTGCGCCCGCCTCACGCTCTTGCAGGCCCAGA
TGCAGGGGATCGCACTGGGGCCAGACAGCGGTCGCGAGCGCGGCACTGGG
GGCGGCTTCACCGCCGCCCCCGCCCCCGACAGCCCCAAGGGCCGCAGGGG
CTTCTACGCCGCCCCGCCGGAAGCAGACACAGCCGCCGTGTTGCCTGCAG
GCAGCACGGGTGGGGCGCCGGGGACGGACAGCACGGTACCGTCGGCCTTT
GGCTTCGCCGCCCAGGAGCCGGCGCCTGACCCCCGAGCTCCCGCCACCGC
TGCCGGCGACGGGGCGGGGGCCGTTGGGCAACCGGGGCCGAAGCCGCCGC
CGCCACTGCCGTGGCCAGAGACGGCAGCAGCGGCCGGGCCGAATGGGCGC
ACAGCTGACAGAATCAAGGGCTGCCAACAAGCGCATCATGTGGGAGCGCG
ACCAGGCCTGCGCCCGCCTCACGCTCTTGCAGGCCCAGATGCAGGGGATC
GCACTGGGGCCAGACAGCGGTCGCGAGCGCGGCACTGGGGGCGGCTTCAC
CGCCGCCCCCGCCCCCGACAGCCCCAAGGGCCGCAGGGGCTTCTACGCCG
CCCCGCCGGAAGCAGACACAGCCGCCGTGTTGCCTGCAGGCAGCACGGGT
GGGGCGCCGGGGACGGACAGCACGGTACCGTCGGCCTTTGGCTTCGCCGC
CCAGGAGCCGGCGCCTGACCCCCGAGCTCCCGCCACCGCTGCCGGCGACG
GGGCGGGGGCCGTTGGGCAACCGGGGCCGAAGCCGCCGCCGCCACTGCCG
TGGCCAGAGACGGCAGCAGCGGCCGGGCCG back to top
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