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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 468 |
| Cds size | 465 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815351.2202997-CDS-S-ischiensis_contig1:3278229..3278419 | 1622815351.2202997-CDS-S-ischiensis_contig1:3278229..3278419 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 3278230..3278419 - |
| 1695739654.7647016-CDS-S-ischiensis_contig1:3278229..3278419 | 1695739654.7647016-CDS-S-ischiensis_contig1:3278229..3278419 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 3278230..3278419 - |
| 1622815351.23725-CDS-S-ischiensis_contig1:3278708..3278802 | 1622815351.23725-CDS-S-ischiensis_contig1:3278708..3278802 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 3278709..3278802 - |
| 1695739654.7759995-CDS-S-ischiensis_contig1:3278708..3278802 | 1695739654.7759995-CDS-S-ischiensis_contig1:3278708..3278802 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 3278709..3278802 - |
| 1622815351.2552161-CDS-S-ischiensis_contig1:3279894..3280075 | 1622815351.2552161-CDS-S-ischiensis_contig1:3279894..3280075 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 3279895..3280075 - |
| 1695739654.7880445-CDS-S-ischiensis_contig1:3279894..3280075 | 1695739654.7880445-CDS-S-ischiensis_contig1:3279894..3280075 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 3279895..3280075 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.481.1 >prot_S-ischiensis_contig1.481.1 ID=prot_S-ischiensis_contig1.481.1|Name=mRNA_S-ischiensis_contig1.481.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=155bp
ACTPQQRARSTALVEVKVPLEAGKSRLGIGDLARGPSSSIAMGGDANDSD
DNVLFDFPTRAAFRASKGGDSDSDEEDSSSDSDALLAGDPKRGSGGGPRK
AAAAAKTAKKPRRRALVAKRGLANRRAAKGATTKSGAASPPVSAILPISD
SDSDI back to topmRNA from alignment at S-ischiensis_contig1:3278228..3280075- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.481.1 ID=mRNA_S-ischiensis_contig1.481.1|Name=mRNA_S-ischiensis_contig1.481.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1848bp|location=Sequence derived from alignment at S-ischiensis_contig1:3278228..3280075- (Schizocladia ischiensis KU_0333)
GCGTGCACGCCTCAACAGCGGGCTCGCAGTACGGCACTGGTCGAGGTTAA
GGTTCCCCTCGAGGCGGGAAAGTCCAGGCTTGGAATCGGTGACCTGGCAC
GCGGGCCCTCCTCCTCCATCGCAATGGGGGGGGACGCGAACGACTCAGAC
GACAACGTGCTCTTCGATTTCCCAACCCGAGGTTGGTGAACAGTTGTACT
CTGTGGTGATACTTTTTTAATGCTGTCCTTGGTTGGGGACGTCCCTGGGT
TCATGCGCCCTACCGCTTTTCCTGGGCCAGGGAGTGCAATTGGGGGTTGG
TGGGCATTTTTAGGTCTCAAGTTAACGGCGCGACCGGCAGTCGGGAGCGT
CCTGCTAGACGCCAGAGCGATCCAACAGATACCACGCATGAGGCGCGTGG
GTACAGATGCCACACACGAGGGGCGTGGGTGTGGCGTAGTTGGTTGATAC
ACGTGACGCAGTTCAGACCGTTGACTTGCGGCGGCGCAGAGCCCGGGGCA
GGGCGGTTTCTTTGCCCTGGATGGTGTGCAGAGGCACTGGTGCCTGTGCC
ACCCATAGCGAGCAGTCAGCCATATGTAAGCTCGCATATATATATATGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGACTACTCGG
CAATGTCTGATTCGTGCGGCAGTGCTGCCCACAAGTCGCACTAGCGAGCG
AGGCATTTCCGGGCGCACCTTAAAGTGAAGGGCTGGGCCGACAGGCCTAC
AAGTAGCCCGCGGCGACGTGAAATCGTTTCTCTCACTGGTGCTGATCACA
GTTCTCTAAGGGTTGGCTTGAACCTGAGATCAAATACCGTAAACGCCCGC
TGGGGTTTGCTCGCTTTGCTGTTAGTACATGCTGCCCTGTACTCGTGCCT
AAGTACATATGCCGCGTGAGCCTCAATTATTGATGTACTTCGAGGTATTT
ACTACTTCACGTACTACTACTTGGAAATATGTAGTGCATCGGAGTACATT
GTTAGTCGTTGCTCGGCCTGGCCGCATACGTTGCATTTCCCCCTTGCATC
ACAGAACAGCTCTTTGGGCGTGGCTACACGCTGCTCAAGCCCTCGCCCCA
TATTGGACCCTGGGAGACATCCAGACTCTCTCGTATCACAGCTAATCCTT
CCATTTTTCCTGACGGGTTTAATGTCACCCGCCGAACCCCCCGCTGCAAC
GTTCTGAAATATTTCCCGCCTCACCCACTCCCCCCGCTGTGTCCTCCCCG
CCCGCTCGGCTGCGCAACACGAGCAGCATTCCGTGCGTCCAAGGGGGGCG
ACTCTGACAGTGATGAGGAGGACTCGTCCAGCGACAGCGACGCCTTGCTC
GCCGGCGACCCGAAGAGGTAATCACGAAGCATTTCGCAGGCATGTATATA
TATATATAATATATGTACTCGTACTCACATGGTGCTTGCCGTAGTCCCCA
GAACACTGACCACGTGCCTCGGTCGAGACGGAGCAGGTTATTCCCGCAGG
CACGTACGATGCAAATGCACGTCCCGCAAATTGACATATCATTGTGACGG
GCCCCATTCCCCCCCTTACCTCCACCGGGCGCCGCGCATTGCCCCGCCCC
CCCTCAACAATGTCACGTTCTGTTGTGCGGCGGCGGCGGCGGCGACGGAA
ATCCAGGGGGTCCGGAGGAGGACCCCGCAAGGCGGCTGCCGCTGCCAAAA
CCGCCAAAAAGCCCCGCCGCCGCGCCCTGGTGGCAAAGCGGGGTCTGGCC
AATCGTAGGGCTGCAAAGGGGGCCACCACCAAGTCTGGAGCCGCCTCCCC
CCCGGTGTCGGCGATTCTTCCCATCTCTGACAGCGACAGTGATATTGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:3278228..3280075- >mRNA_S-ischiensis_contig1.481.1 ID=mRNA_S-ischiensis_contig1.481.1|Name=mRNA_S-ischiensis_contig1.481.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=930bp|location=Sequence derived from alignment at S-ischiensis_contig1:3278228..3280075- (Schizocladia ischiensis KU_0333)
GCGTGCACGCCTCAACAGCGGGCTCGCAGTACGGCACTGGTCGAGGTTAA
GGTTCCCCTCGAGGCGGGAAAGTCCAGGCTTGGAATCGGTGACCTGGCAC
GCGGGCCCTCCTCCTCCATCGCAATGGGGGGGGACGCGAACGACTCAGAC
GACAACGTGCTCTTCGATTTCCCAACCCGAGGCGTGCACGCCTCAACAGC
GGGCTCGCAGTACGGCACTGGTCGAGGTTAAGGTTCCCCTCGAGGCGGGA
AAGTCCAGGCTTGGAATCGGTGACCTGGCACGCGGGCCCTCCTCCTCCAT
CGCAATGGGGGGGGACGCGAACGACTCAGACGACAACGTGCTCTTCGATT
TCCCAACCCGAGCAGCATTCCGTGCGTCCAAGGGGGGCGACTCTGACAGT
GATGAGGAGGACTCGTCCAGCGACAGCGACGCCTTGCTCGCCGGCGACCC
GAAGAGCAGCATTCCGTGCGTCCAAGGGGGGCGACTCTGACAGTGATGAG
GAGGACTCGTCCAGCGACAGCGACGCCTTGCTCGCCGGCGACCCGAAGAG
GGGGTCCGGAGGAGGACCCCGCAAGGCGGCTGCCGCTGCCAAAACCGCCA
AAAAGCCCCGCCGCCGCGCCCTGGTGGCAAAGCGGGGTCTGGCCAATCGT
AGGGCTGCAAAGGGGGCCACCACCAAGTCTGGAGCCGCCTCCCCCCCGGT
GTCGGCGATTCTTCCCATCTCTGACAGCGACAGTGATATTGGGGTCCGGA
GGAGGACCCCGCAAGGCGGCTGCCGCTGCCAAAACCGCCAAAAAGCCCCG
CCGCCGCGCCCTGGTGGCAAAGCGGGGTCTGGCCAATCGTAGGGCTGCAA
AGGGGGCCACCACCAAGTCTGGAGCCGCCTCCCCCCCGGTGTCGGCGATT
CTTCCCATCTCTGACAGCGACAGTGATATT back to top
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