mRNA_S-ischiensis_contig1.218.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.218.1
Unique NamemRNA_S-ischiensis_contig1.218.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: D7FQF2_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF2_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 1.600e-118
Identity = 178/297 (59.93%), Postives = 214/297 (72.05%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMDRGPHPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPAL 942
            MPELPEVE +R   E+  +G  I+   A E GGGPRDG FDD ++ E  TA S+  TLEGR +   +R+GKQ+W  +D+ PHPLFHFGMTG   V+G     +  F +    EWPP+F KL++Q+ +G  +A  DPRRL RV+LR +PE SPPIS LGPDP+THP+ LE F AAL K +APIKAVLL Q RVVSGVGNW+ADEVC+QA VHPGAACNTL  EQ+++LH  LL VCREA +  ADYT FPKEWLFH+RWGKGK     N  GAPRV  GH + FD VGGRTTA VPA+
Sbjct:    1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVS--EEWPPRFAKLEIQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQIAALHSRLLSVCREACEARADYTSFPKEWLFHHRWGKGK-----NSEGAPRVSSGHPIVFDVVGGRTTAIVPAV 290          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A7S1N840_9EUGL (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N840_9EUGL)

HSP 1 Score: 301 bits (771), Expect = 3.150e-97
Identity = 152/298 (51.01%), Postives = 193/298 (64.77%), Query Frame = 1
Query:   46 LPMPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMDRGP-HPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVP 936
            L MPELPEV+AAR+L   +  G+ I   + VE+GGGPRDG FDD ++ EG T   ++ +++GR + A  RKGKQLW E+  G   PLFHFGMTG   V+GV  + Y+ F +     WPP+FTKL+L    G+++AF DPRRLGRV+LR  P   PPIS L PDP+T P   E F   L K   PIKAVLLDQ R V GVGNW+ADEV +Q+ ++PG     L   QV +LH  ++RVC+EA    AD  RFP +WLFHYRWG GK+        A R+P G  + F+T  GRTTA+VP
Sbjct:   13 LTMPELPEVDAARQLVMQHCGGKVIDQVLCVESGGGPRDGQFDDIVIGEGVTPEKLTKSMKGRKLVAVHRKGKQLWFELGGGDLSPLFHFGMTGSFTVKGVKALKYKEFLVRDEV-WPPRFTKLELVFTGGVRLAFTDPRRLGRVKLRAAPVTEPPISLLAPDPVTGPFHCEAFSQILRKAQTPIKAVLLDQERAVCGVGNWVADEVLFQSGIYPGTTAAQLTDAQVETLHATIIRVCKEACQAQADSDRFPLDWLFHYRWGHGKS--------ADRLPDGRRIAFETCAGRTTAWVP 301          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A835YY62_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY62_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.730e-94
Identity = 161/326 (49.39%), Postives = 202/326 (61.96%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMD-RGPHPLFHFGMTGGLLVRGVDGVNYRN-----------FTIGG-----------------GYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPAL 942
            MPELPEVE ARRL E++ VG KI +  A E+GGGPRDG FDD IM EG T   +   L+GR +  A RKGK LWLE++ +G HP  H GMT           N+R+           FT+                   G EWP +FTKL++   +G+++AF DPRRLGR+ LR DP+  PPIS L PDP+  P  +ED  A   KISAP+KAVLLDQ R+V GVGNW+ADEVCYQA +HPG+ CNTL++EQ+S LH  L++V   A + NAD  ++PK WLFHYRW K       N GG      G+ + F+TVGGRTTA VP +
Sbjct:    1 MPELPEVECARRLLEEHCVGAKIVSVNARESGGGPRDGQFDDIIMGEGVTEEDVVAALKGRKLLHAGRKGKNLWLELEGKGKHPTMHLGMTA---------CNFRSEQRQLFFLLCAFTVHHNSLMDVLVTWCCSLLQVGDEWPLRFTKLEIDFSNGVKLAFTDPRRLGRICLRADPKSEPPISTLAPDPLYEPPTVEDLVARFAKISAPLKAVLLDQNRIVCGVGNWVADEVCYQAGIHPGSPCNTLSAEQISQLHEALIQVVTVACEANADSDKYPKSWLFHYRWSKR------NNGGKVTDAHGNPIEFETVGGRTTALVPKV 311          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A7S2UZQ4_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ4_9STRA)

HSP 1 Score: 292 bits (747), Expect = 5.380e-92
Identity = 154/315 (48.89%), Postives = 193/315 (61.27%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMDRGP-----------------HPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKG-KTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPAL 942
            MPELPEV++A +    N  G+++      E GGGPR+GLFD+ IM EG  A +I+  + GR ++A  R+GKQLW      P                 H LFH GMTG   ++G DGV Y          WPP+F KL+L  ++G++VAF DPRRLGR++LR +P  SPPIS L  DP+  P  L  F   L ++SAP+KA LLDQ ++VSGVGNWIADEVC+QARVHP   CN L  E  + LH  LL +C+ AVD  ADY +FP  WLFHYRWGKG KTN K        +P G  + F  VGGRTTA VPA+
Sbjct:    1 MPELPEVDSAGKFVWKNCKGQRVVDVCPNEQGGGPREGLFDEIIMGEGLDAENITKAMLGRRLQAVGRRGKQLWFTFSEKPTEKSKKKKEDAAESCSSHVLFHLGMTGSFRIQGKDGVCYVRLKPEDKTVWPPRFCKLELVFENGVRVAFCDPRRLGRIKLRSNPLESPPISLLARDPVEDPPTLAQFQDRLKELSAPVKAALLDQSKIVSGVGNWIADEVCFQARVHPATRCNDLTEEMSARLHSSLLDICKFAVDVEADYHQFPDSWLFHYRWGKGNKTNSK--------MPNGDKIEFSEVGGRTTAVVPAV 307          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A516AG26_LINPO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG26_LINPO)

HSP 1 Score: 276 bits (705), Expect = 8.850e-88
Identity = 149/302 (49.34%), Postives = 194/302 (64.24%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMD-RGPHPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQ----VAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPAL 942
            MPELPEVEA R L E + VG K+   I++E GGGP DG FD K++ EG     +   L  R V AA+R+GK LWLE+  +GP  LFH GMTG L + GV+  ++++F +     WPP+FTKL+L+L    Q    +AF DPRR G+V LR +    PP+S LGPDP+  P  LE F   L + +AP+KA+LLDQ + V GVGNW+ADEV  +ARVHP A   TL+  Q+++LH  +L V + AV  +AD  RFPK WLFH RWG+G +      G    +P G  V F+ VGGRTTA+VPAL
Sbjct:    1 MPELPEVEAMRGLLERHCVGCKVLRVISLEAGGGPLDGKFDSKVIGEGVGPQQLEAALLRRPVLAARRRGKHLWLELGGQGPQLLFHCGMTGALAIDGVERFSFQSFRVD--EAWPPRFTKLQLELGGRGQEPTRLAFADPRRFGKVLLRQNAAEEPPVSLLGPDPLASPFPLEAFAEQLRRSAAPVKALLLDQEKAVCGVGNWVADEVLREARVHPAAPARTLSDGQLAALHRGVLSVLKRAVAVDADAARFPKNWLFHCRWGQGPS------GAGVCLPDGSEVAFEDVGGRTTAYVPAL 294          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A7S2CVY2_9EUKA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CVY2_9EUKA)

HSP 1 Score: 264 bits (675), Expect = 1.190e-84
Identity = 133/259 (51.35%), Postives = 168/259 (64.86%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEG-ATAASISTTLEGRTVRAAKRKGKQLWLEMDRGPHPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRW 825
            MPELPEVEAARRL  D+  G+ I+  +++E GGGPR G FD+ + D+   TA S++T L+G+ V   +R+GKQLWL +   PH L HFGMTG  +VRGV    Y+ F +    EWPP+FTKL+L  + G  +AF DPRRLGR+RLR DP    P  +L PDP+   +    +   LG     IKAVLLDQ  +VSGVGNW+ADE+ YQA +HP A C TL+  QV  L + L  V   AV  NAD  +FP EWLFHYRW
Sbjct:    1 MPELPEVEAARRLLTDHCAGKSIAMVVSLEGGGGPRSGQFDNIVNDDPECTATSVATALQGKRVVEVRRRGKQLWLLLSAPPHLLAHFGMTGSFVVRGVAPAKYQEFKVHD-QEWPPRFTKLELGFEDGTALAFCDPRRLGRLRLRADPPSEDPWRSLAPDPLLDAVDRTKWTQVLGSKHCAIKAVLLDQSALVSGVGNWVADEILYQAGIHPEAVCATLSDAQVERLIIALEHVVNVAVSVNADAEQFPAEWLFHYRW 258          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A7S0NUS3_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUS3_9EUKA)

HSP 1 Score: 268 bits (685), Expect = 3.250e-84
Identity = 150/303 (49.50%), Postives = 191/303 (63.04%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMD--RGPHP----LFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLR-LDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPA 939
            MPELPEVEA RR  E   +G++++  +A E GGGPRDG FDDKI+ EG T   ++  L+ + V A KR+GKQLW+E+   RG       L HFGMTG ++++G D   Y+ F+I     WPP+FTKL+L       +A+ DPRR GR+ LR   P   PP+S L  DP+T P+ L +F AAL + SAPIKA LLDQG    GVGNW+ADEV YQA V P A CN L+  Q+   H  +L VC  A    AD + FP  WLFH+RW + +T+G  +       P G  +HFDTVGGRTTAFVPA
Sbjct:    1 MPELPEVEAQRRTIEAATLGKQVTLLVATEQGGGPRDGEFDDKIVGEGVTPPELAAALQDKWVLAVKRRGKQLWVELSATRGGACCGCLLLHFGMTGAVVIKGRDAPLYKKFSIDMS-SWPPRFTKLELVFGD-TSLAYTDPRRFGRILLRGPSPSDVPPLSELAADPLTDPLPLANFAAALRRKSAPIKAALLDQGFAFCGVGNWVADEVLYQAGVLPSAPCNRLSDAQIERTHAQVLAVCNVACAAGADASAFPPGWLFHHRW-QNQTSGSMD------SPLGR-IHFDTVGGRTTAFVPA 293          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A0M0JLU5_9EUKA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLU5_9EUKA)

HSP 1 Score: 267 bits (683), Expect = 5.280e-84
Identity = 144/295 (48.81%), Postives = 183/295 (62.03%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEG-ATAASISTTLEGRTVRAAKRKGKQLWLEMDRGPHPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFV 933
            MPELPEVE AR L   + V ++I+  + VE GGGPRDGLFD+ + D+  A AA +S+ LEG+ +   +R+GKQLWL +   PH L HFGMTG  +VRGV   +Y+ F +     WPP+FTKL+LQ ++G  +AF DPRRLGR+RLR DP+   P  +L PDP+  PI    +   L      IKA+LLDQ  +VSGVGNW+ADEV + A VHP A C +L+  QV  L   L  V   AV   A    FP++WLFHYRWGK      G  GGA        + F TVGGRT+A V
Sbjct:    1 MPELPEVETARNLLATHCVSQRITMAVTVEGGGGPRDGLFDEIVFDDKEADAAIVSSLLEGKQLVEVRRRGKQLWLVLSSPPHLLAHFGMTGAFVVRGVAAQSYKEFRVHD-EAWPPRFTKLELQFEAGNALAFCDPRRLGRLRLRADPQNEEPWRSLAPDPLIDPIEKGRWLEVLAAKGCNIKALLLDQAALVSGVGNWVADEVLFHAGVHPEAICRSLSDAQVDRLRAALTHVLNVAVSCGAKDEEFPRDWLFHYRWGKVPGTVPGERGGA--------ITFLTVGGRTSAVV 286          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A2P6TC37_CHLSO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC37_CHLSO)

HSP 1 Score: 269 bits (687), Expect = 1.410e-83
Identity = 145/297 (48.82%), Postives = 189/297 (63.64%), Query Frame = 1
Query:   52 MPELPEVEAARRLAEDNIVGRKISTCIAVETGGGPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMDRGPHPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPAL 942
            MPELPEVE ARRLAE   VG++I   I           + DD+ +        +   L GRT+ AAKR+GKQ+W E+D GP  L HFGMTGGL+V+G+   +Y++F I     WPP+F K++L+L+ G QVAF D RR  +VR   DPEG PPIS LG DP+ +   LE F AAL      IKA+LLDQ    +G+GNW+ADEV YQ+RVHP    NT+ ++QV++LH  +  VCR A +  AD  RFP +WLFHYRWGKG  NG+ +     ++P G  +   TVGGRT+A VPA+
Sbjct:    1 MPELPEVEGARRLAERTCVGKRIVEAI-----------IADDEKVICNVKPQELQAALVGRTIVAAKRRGKQMWWELDAGPSLLLHFGMTGGLVVKGIGAAHYKSFVIDDS-AWPPRFCKIELKLEDGTQVAFCDSRRFAKVRFLEDPEGRPPISELGWDPLLNMPALEAFQAALAGQRRAIKALLLDQS-FSAGIGNWVADEVLYQSRVHPEQPANTIPADQVAALHAAIRDVCRLASEVEADADRFPLDWLFHYRWGKG--NGQKS-----KMPSGQAIEHLTVGGRTSAVVPAV 277          
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Match: A0A6H5JAV5_9PHAE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV5_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 4.300e-83
Identity = 142/234 (60.68%), Postives = 163/234 (69.66%), Query Frame = 1
Query:  283 DRGPHPLFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAFVDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIKAVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLRVCREAVDHNADYTRFPKEWLFHYR--------------WGKGKTNGKGNGGGAPRVPGGHTVHFDTVGGRTTAFVPAL 942
             R PHPLFHFGMTG   V+G     +  F +    EWPP+F KL+LQ+ +G  +A  DPRRL RV+LR +PE SPPIS LGPDP+THP+ LE F AAL K +APIKAVLL Q RVVSGVGNW+ADEVC+QA VHPGAACNTL  EQV++LH  LL VCREA +  ADYT FPKEWLFH+R              WGKGK     N  GAPRV  GH + FD VGGRTTA VPA+
Sbjct:  310 SRPPHPLFHFGMTGAFTVKGEKRHKFVKFKVS--EEWPPRFAKLELQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQVAALHSRLLSVCREACEARADYTSFPKEWLFHHRQGMHHPRSPTRTLLWGKGK-----NSEGAPRVSSGHPIVFDVVGGRTTAIVPAV 536          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQF2_ECTSI1.600e-11859.93DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S1N840_9EUGL3.150e-9751.01DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A835YY62_9STRA1.730e-9449.39DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S2UZQ4_9STRA5.380e-9248.89DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A516AG26_LINPO8.850e-8849.34DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S2CVY2_9EUKA1.190e-8451.35DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A7S0NUS3_9EUKA3.250e-8449.50DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A0M0JLU5_9EUKA5.280e-8448.81DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A2P6TC37_CHLSO1.410e-8348.82DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A6H5JAV5_9PHAE4.300e-8360.68DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:1476064..1478529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.1
Seed ortholog evalue2.7e-97
Seed eggNOG ortholog2880.D7FQF2
KEGG koko:K10563
KEGG Pathwayko03410,map03410
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360
EggNOG free text desc.oxidized purine nucleobase lesion DNA N-glycosylase activity
EggNOG OGs2QVDB@2759,COG0266@1
EC3.2.2.23,4.2.99.18
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA glycosylase/AP lyase, catalytic domain
Ec32 orthologEc-01_006350.1
Exons5
Model size946
Cds size942
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.218.1prot_S-ischiensis_contig1.218.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 1476066..1478529 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815396.2340882-CDS-S-ischiensis_contig1:1476065..14762871622815396.2340882-CDS-S-ischiensis_contig1:1476065..1476287Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1476066..1476287 -
1695739679.7239995-CDS-S-ischiensis_contig1:1476065..14762871695739679.7239995-CDS-S-ischiensis_contig1:1476065..1476287Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1476066..1476287 -
1622815396.2815807-CDS-S-ischiensis_contig1:1476793..14770901622815396.2815807-CDS-S-ischiensis_contig1:1476793..1477090Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1476794..1477090 -
1695739679.738146-CDS-S-ischiensis_contig1:1476793..14770901695739679.738146-CDS-S-ischiensis_contig1:1476793..1477090Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1476794..1477090 -
1622815396.2952123-CDS-S-ischiensis_contig1:1477821..14779571622815396.2952123-CDS-S-ischiensis_contig1:1477821..1477957Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1477822..1477957 -
1695739679.7494838-CDS-S-ischiensis_contig1:1477821..14779571695739679.7494838-CDS-S-ischiensis_contig1:1477821..1477957Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1477822..1477957 -
1622815396.3414485-CDS-S-ischiensis_contig1:1478132..14782631622815396.3414485-CDS-S-ischiensis_contig1:1478132..1478263Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1478133..1478263 -
1695739679.7627528-CDS-S-ischiensis_contig1:1478132..14782631695739679.7627528-CDS-S-ischiensis_contig1:1478132..1478263Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1478133..1478263 -
1622815396.3549988-CDS-S-ischiensis_contig1:1478373..14785291622815396.3549988-CDS-S-ischiensis_contig1:1478373..1478529Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1478374..1478529 -
1695739679.7777433-CDS-S-ischiensis_contig1:1478373..14785291695739679.7777433-CDS-S-ischiensis_contig1:1478373..1478529Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 1478374..1478529 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.218.1

>prot_S-ischiensis_contig1.218.1 ID=prot_S-ischiensis_contig1.218.1|Name=mRNA_S-ischiensis_contig1.218.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=314bp
GRAGERANARQLHVLLPMPELPEVEAARRLAEDNIVGRKISTCIAVETGG
GPRDGLFDDKIMDEGATAASISTTLEGRTVRAAKRKGKQLWLEMDRGPHP
LFHFGMTGGLLVRGVDGVNYRNFTIGGGYEWPPKFTKLKLQLDSGLQVAF
VDPRRLGRVRLRLDPEGSPPISNLGPDPMTHPIRLEDFGAALGKISAPIK
AVLLDQGRVVSGVGNWIADEVCYQARVHPGAACNTLASEQVSSLHVCLLR
VCREAVDHNADYTRFPKEWLFHYRWGKGKTNGKGNGGGAPRVPGGHTVHF
DTVGGRTTAFVPAL
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mRNA from alignment at S-ischiensis_contig1:1476064..1478529-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.218.1 ID=mRNA_S-ischiensis_contig1.218.1|Name=mRNA_S-ischiensis_contig1.218.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2466bp|location=Sequence derived from alignment at S-ischiensis_contig1:1476064..1478529- (Schizocladia ischiensis KU_0333)
GGGCGGGCGGGCGAGCGGGCAAATGCGCGCCAACTGCACGTGTTGCTTCC CATGCCTGAGCTGCCGGAGGTGGAAGCTGCGCGGCGGCTGGCGGAAGATA ACATTGTAGGGAGGAAGATCAGCACGTGTATCGCGGTTGAGACCGGCGGA GGCCCGGTGAGCTGACGTTCCATGCGCTCATAGCACAACTGGGTCATCAC TGTTCCGTGTCATCATGCCCGAGCGTTGTCACCCTAATTGTGTTTACTAT GCCTTGCTGGCTGCAGCGGGATGGACTGTTCGACGACAAGATCATGGACG AGGGAGCGACAGCAGCGTCCATCTCTACGACGCTGGAAGGCCGGACGGTG CGGGCGGCCAAGAGGAAAGGGAAGCAGCTTTGGCTGGAAATGGACAGGTA CGAACCTCCAGGGGGAGAGTGCGCGTCCGTGTTCCAGCAGACCTTGCCGT GCTCCCAAGCAAAAGGTGCAGCATGTGTCGGTGACTTTTGCTCCTCAAAC CTCCACCACCTCCAGTTTACTCACGGCCTCCCTTGCCTCTGCCTCGTCGG TTGGTGGTCGATGTTTGCGCAGGGGTCCCCACCCATTGTTTCATTTCGGC ATGACTGGCGGCTTGTTGGTGCGGGGCGTGGACGGCGTGAATTACAGAAA CTTCACTATCGGTGGGGGTTACGAATGGCCGCCGAAGTTCACCAAGCTGA AGCTGCAGGTGCGGTACGTCAGAGCGCTGGCCGGGGTCTCGGGGTCTGGC AGTCGCAACGGAGAGAGTGCAACGTGTCGGTAGAGATATCTTCGAAGAAC TTGTGGTACTTGAGTACTACGATAGTAGCATTTTTTCAAGTACAGTAGTA TTCAAAACCGAAGTGGCGAGTCAGAGTGGGGAGGAAGCGGGGGAGGGAAG GAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGTCGAAGAAGAGGAGGAGAG GAGGGGGAAGAGGAGGAGCGGGAGGAAGGGCTGGGCAGCCGGTGGTGACG CAGTGCAGGCAGACACAACCACAGCACTGCAGTGTGCCTGCTCGTACACT CACAGTTTAGCGCACCATACTGCCGTCCTCACAAGGTTCGAGGCTCAAAG ATACTTCCATGTTTAGCACGCAGTCTGCTCCGTCTCGACCGAGGTGCGCG GTCAATGGTCTTGGGACTACGGCAAGCACAATGCGAGTGGGTACTAGTAA TCACGTCTCTGTGCATGCCCTGGACCCGAATGATCCTCGTCTTTGTTCCT TCTCGTGGATCGCTGGCCAGCTGTAGCTTTCGCCATTGGTGTACGTATAC TTCGCATATACTACGTAGTATATAGTCTGCCGCCCTAGCCGCACGCCACC GCCACCACAGCTAATACGAGAACACTCAATCTCACACATGTGCGATTGTA CCTCGTTACAATATACATTAATCACCACCGCCACCACAGCTGGACTCGGG ACTGCAGGTGGCCTTTGTGGACCCCCGGCGCCTAGGCCGCGTGCGCCTTC GCCTGGACCCGGAGGGCTCCCCCCCTATCAGCAACCTGGGGCCAGACCCG ATGACACACCCCATCCGGCTGGAAGACTTTGGGGCCGCCCTGGGCAAGAT ATCGGCGCCCATCAAGGCCGTTTTGCTGGACCAGGGGCGGGTGGTGAGCG GTGTGGGGAACTGGATAGCGGACGAGGTGTGTTACCAGGCGAGGGTGCAC CCGGGCGCGGCCTGCAACACCCTCGCTTCAGAGCAGGTCAGTGCTTGGCC CCTTGGGAGGGGCGGCAGCAAGTTAAACCTTCTACCCCTGGGGTCCGTAT ATTCATAGGGTTTTAGTGTGCAAGTCCATTTTAGCAGGGGCACAAGGGTT AACCTGGTGCCTGACTCAAAGCCCGTACAGTTCTACTTCCGGAAGTACAG TGGTACGAGTACTTCGAAGTGGTTCAGTTTACTGTGCTGTCGTCCTCTAC AGTGGGGGAGAAGGGGGACGCCTTCAGGGGCCTGCGGTGCGCCGATATGA CCCTGAATTCCTGGTTTGTTCGAACAGTGCACCGCAGGCCTTTAAAGGGT ACGGTACCACACCTGGGCAGCAGAAGCACGCGCAGTAGCACGTTCTACGT GGTGCAACTGCACCGGTGCTTTGTGCCACCGTACTTCAACAACGAATATC TGCATTTACAGCACTTGCAGAGTGCGTTGGGTACCACTCTGTTAGGTACA CCAAGTGATTTTCAATCAATGAGGTCACAATCATTCCCCCAGGTATCCAG CCTGCACGTCTGCCTGCTCCGGGTCTGCCGCGAGGCGGTCGACCACAACG CGGACTACACGCGCTTCCCGAAAGAGTGGCTCTTCCACTACCGGTGGGGC AAGGGCAAGACCAACGGCAAGGGCAACGGCGGAGGGGCGCCACGCGTGCC GGGGGGACACACCGTGCACTTTGACACGGTCGGCGGGCGGACCACCGCGT TCGTGCCCGCCCTGCA
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:1476064..1478529-

>mRNA_S-ischiensis_contig1.218.1 ID=mRNA_S-ischiensis_contig1.218.1|Name=mRNA_S-ischiensis_contig1.218.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1884bp|location=Sequence derived from alignment at S-ischiensis_contig1:1476064..1478529- (Schizocladia ischiensis KU_0333)
GGGCGGGCGGGCGAGCGGGCAAATGCGCGCCAACTGCACGTGTTGCTTCC
CATGCCTGAGCTGCCGGAGGTGGAAGCTGCGCGGCGGCTGGCGGAAGATA
ACATTGTAGGGAGGAAGATCAGCACGTGTATCGCGGTTGAGACCGGCGGA
GGCCCGGGGCGGGCGGGCGAGCGGGCAAATGCGCGCCAACTGCACGTGTT
GCTTCCCATGCCTGAGCTGCCGGAGGTGGAAGCTGCGCGGCGGCTGGCGG
AAGATAACATTGTAGGGAGGAAGATCAGCACGTGTATCGCGGTTGAGACC
GGCGGAGGCCCGCGGGATGGACTGTTCGACGACAAGATCATGGACGAGGG
AGCGACAGCAGCGTCCATCTCTACGACGCTGGAAGGCCGGACGGTGCGGG
CGGCCAAGAGGAAAGGGAAGCAGCTTTGGCTGGAAATGGACAGCGGGATG
GACTGTTCGACGACAAGATCATGGACGAGGGAGCGACAGCAGCGTCCATC
TCTACGACGCTGGAAGGCCGGACGGTGCGGGCGGCCAAGAGGAAAGGGAA
GCAGCTTTGGCTGGAAATGGACAGGGGTCCCCACCCATTGTTTCATTTCG
GCATGACTGGCGGCTTGTTGGTGCGGGGCGTGGACGGCGTGAATTACAGA
AACTTCACTATCGGTGGGGGTTACGAATGGCCGCCGAAGTTCACCAAGCT
GAAGCTGCAGGGGTCCCCACCCATTGTTTCATTTCGGCATGACTGGCGGC
TTGTTGGTGCGGGGCGTGGACGGCGTGAATTACAGAAACTTCACTATCGG
TGGGGGTTACGAATGGCCGCCGAAGTTCACCAAGCTGAAGCTGCAGCTGG
ACTCGGGACTGCAGGTGGCCTTTGTGGACCCCCGGCGCCTAGGCCGCGTG
CGCCTTCGCCTGGACCCGGAGGGCTCCCCCCCTATCAGCAACCTGGGGCC
AGACCCGATGACACACCCCATCCGGCTGGAAGACTTTGGGGCCGCCCTGG
GCAAGATATCGGCGCCCATCAAGGCCGTTTTGCTGGACCAGGGGCGGGTG
GTGAGCGGTGTGGGGAACTGGATAGCGGACGAGGTGTGTTACCAGGCGAG
GGTGCACCCGGGCGCGGCCTGCAACACCCTCGCTTCAGAGCAGCTGGACT
CGGGACTGCAGGTGGCCTTTGTGGACCCCCGGCGCCTAGGCCGCGTGCGC
CTTCGCCTGGACCCGGAGGGCTCCCCCCCTATCAGCAACCTGGGGCCAGA
CCCGATGACACACCCCATCCGGCTGGAAGACTTTGGGGCCGCCCTGGGCA
AGATATCGGCGCCCATCAAGGCCGTTTTGCTGGACCAGGGGCGGGTGGTG
AGCGGTGTGGGGAACTGGATAGCGGACGAGGTGTGTTACCAGGCGAGGGT
GCACCCGGGCGCGGCCTGCAACACCCTCGCTTCAGAGCAGGTATCCAGCC
TGCACGTCTGCCTGCTCCGGGTCTGCCGCGAGGCGGTCGACCACAACGCG
GACTACACGCGCTTCCCGAAAGAGTGGCTCTTCCACTACCGGTGGGGCAA
GGGCAAGACCAACGGCAAGGGCAACGGCGGAGGGGCGCCACGCGTGCCGG
GGGGACACACCGTGCACTTTGACACGGTCGGCGGGCGGACCACCGCGTTC
GTGCCCGCCCTGGTATCCAGCCTGCACGTCTGCCTGCTCCGGGTCTGCCG
CGAGGCGGTCGACCACAACGCGGACTACACGCGCTTCCCGAAAGAGTGGC
TCTTCCACTACCGGTGGGGCAAGGGCAAGACCAACGGCAAGGGCAACGGC
GGAGGGGCGCCACGCGTGCCGGGGGGACACACCGTGCACTTTGACACGGT
CGGCGGGCGGACCACCGCGTTCGTGCCCGCCCTG
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