mRNA_S-ischiensis_contig1.1185.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: D7G6K8_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K8_ECTSI) HSP 1 Score: 370 bits (949), Expect = 5.550e-105 Identity = 244/570 (42.81%), Postives = 313/570 (54.91%), Query Frame = 3
Query: 687 FNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLLEVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNE---LLVWALKVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRGGSEGRVRRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNAL-AWLEEAT----PCAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGN---EEEEVNLMYVAVTRTKRRLWLNPEMRWLMWRYRAWDSVAVRG 2363
FNVSVR+EA+ +FP +V CKGVHQLAF VGR + KL DLRE DV L +L A+ +PP XXXXXXXX P+P E +L WA W M+ G G SL MTHAGYLKL+QLS+P LG+ YDV+MLDEAQDSNP IA IVLR+ RCAR+LVGDSHQ+IYGFIGA DHL+ G G+++ LTQVFRF Q IAHVA +LVG LK ETRPLLG + G+V+ + GG L W ++ P A+LAR+VSTLV A A + G++VAWVGG +AY+L+A+ED+CL+A+GR EV+H LLK+ K I + F+ +GDRQWA RL+ML+ +DP++L+ + ++R AD +LSTVHKAKGLEFDTVV+A DF +DD+ P + E+EEVN++YVAVTR KRRL +N +R + AW+SV++RG
Sbjct: 732 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLNDRLGKD------------------------------GGASTQPPXXXXXXXXXXXA-------------------------------------PSPVEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXXXASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKRVEG--GKIQHLTQVFRFDQSIAHVANSLVGPLKRETRPLLGCAGKQGKVVLS----------GGTGLEVWQDQERTVKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAIEDMCLMAMGRSSEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRKQVHPRE-------------------------------ADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTGPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLRAFLLVTGAWNSVSLRG 1191
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: A0A7S4TAX2_9DINO (DNA helicase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TAX2_9DINO) HSP 1 Score: 261 bits (668), Expect = 2.700e-69 Identity = 237/679 (34.90%), Postives = 310/679 (45.66%), Query Frame = 3
Query: 630 STPTPSMSTLYWICRRRPQFNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLLEVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPN---------ELLVWALKV-WNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLR--GRGG--SEGRV---------RRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGD--PAGWEPGGNALAWLEEATPCAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGNEEEEVNLMYVAVTRTKRRLWLNPEMRWLMWRY-RAWDSVAVRGGALTAAAAAAGPPNDIMTCTQCLGHLPPXXXXXXXXXXXXXXXXXXXXRTAHGPGPMWWEYVGSGSLRRYCPRCV 2588
+T P + LY IC FNVSVR+EA+ +FP+NV C+ HQLAF+A G Y KL DDLR D+ LAS+ L D LL + AA P P P E L A+ V W M+ RE + MTH GYLKLY LS+P L YDVV+LDEAQD NPAIADIV+ Q CAR+LVGD HQ+IYGF+GA+D L GRGG S+G R+LT+ FRFG IA VA ++ LKGETRPL+G G++L + PA +P A P AY+AR+ + ++ +A A AVG +AWVGGV+ Y L L DLCLLALG R+ V ++ F+ + + F DR+ R++++ R P +L+D + L+R V + A + L+TVHKAKGLE+DTVV+ +DFAS +DL A +G G + +E+N +YVA+TR KR L L R L Y R ++VA+ L AAAA+GP C C +PP GP + GS S RR C C
Sbjct: 375 ATLRPHLQFLY-IC-----FNVSVREEAQRTFPSNVTCRNAHQLAFSAFGFKYRSKLKDDLRAEDL-------LASTAL------------DELLLRRREKRGEAGEEAAQR-----------------------LEVAEVCLATLQNFLNSAAPTVSEEHMPSPLPRMIREGLLTEEALCEAVGVLWARMQDL----------------REDVVKMTHGGYLKLYSLSKPKLA--YDVVLLDEAQDCNPAIADIVMSQS-CARLLVGDKHQAIYGFLGAQDALSAGGRGGDCSDGGAPSAKDKVFRRQLTRCFRFGSNIADVANFVLSSLKGETRPLIGCGKHEGRLLPEPEPEESPARPQPIQGC-----PAPPFAYVARTNAAVIDMALRADAVGLDLAWVGGVKGYGLGLLRDLCLLALGERERVESARVRNFRSLEALRAFARRVDDREALARIEIVRRHQPDALLDRLERLQRAAERRERSAGTSAAAAAT-------------VTSFRGTAAISLATVHKAKGLEWDTVVVGEDFASPEDL--AQEGPGGLSLPLVQEINALYVALTRAKRELQLP---RPLAEAYLREAEAVAL----LPPAAAASGP------CPSCGVEVPPPPPRLFGLPP-------------EGPALV---AAGSASFRRLCSACT 937
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: A0A813FWF8_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FWF8_POLGL) HSP 1 Score: 230 bits (587), Expect = 3.540e-61 Identity = 190/580 (32.76%), Postives = 269/580 (46.38%), Query Frame = 3
Query: 642 PSMSTLYWICRRRPQFNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKL-SDDLREGDVSDLLEVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWAL----------KVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRG----GSEGRV--RRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGN----------EEEEVNLMYVAVTRTKRRLWL 2300
P + LY +C FNVSVR+EA+ FP NV CK VHQLA+A+ G + KL SDDLR D +V K+L + LAS+ H + G G + P P L+ ++ ++W M ++ + MTH GYLKLY LS+P L +YD+V+LDEAQD NPAIA +V Q CAR+LVGD HQ+IYGF+GA+D L+ + GS G V R+LT+ FRFG +A +A ++ GE RP+LG S G +L PGG+ + + P A++AR+ ++++ A +G + WVGGV+ Y L L DLCLL++G+RD V +K F +A V +F DR+ R +++ R + L+ + + + + AADV LSTVHKAKGLE+DTVV+A DF L A R G +G+ + +E+N++YVA+TR KRRL L
Sbjct: 46 PHLQILY-LC-----FNVSVREEAQRGFPKNVTCKSVHQLAYASCGYRFGHKLCSDDLRAED-------------MVSKSLFDPLASTA-------AAGAHSGRKGTSRRQEGGGTAMQRLEGVEACLATL------------RGFLNSADGEVSEKHLPSSRPGILVEGSISEDLVCDLAKELWRRMCD----------------PKDSEVRMTHGGYLKLYSLSKPRL--KYDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQAIYGFLGAQDMLKDQRVQAQGSCGAVIRRQLTRSFRFGPHVADLANFVLRSFVGEARPVLGCGSHEGDIL----------PPGGDTGEGVPQ-RPFAFIARTNTSILKQALRCDEMGWSLEWVGGVKGYKLGLLRDLCLLSMGQRDRVESGRIKAFPSLAAVQNFARRVEDRELVARTELVLRSNAADLLQRLERIEAAAERR-------------------------EKACVAQAADVALSTVHKAKGLEWDTVVVADDFLD----LTAEASRVGLSGSGLTESPTWPGDVQELNMLYVALTRCKRRLQL 528
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: A0A813DDB3_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DDB3_POLGL) HSP 1 Score: 233 bits (595), Expect = 1.090e-60 Identity = 191/580 (32.93%), Postives = 270/580 (46.55%), Query Frame = 3
Query: 642 PSMSTLYWICRRRPQFNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKL-SDDLREGDVSDLLEVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWAL----------KVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRG----GSEGRV--RRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGN----------EEEEVNLMYVAVTRTKRRLWL 2300
P + LY +C FNVSVR+EA+ FP NV CK VHQLA+A+ G + KL SDDLR D +V K+L + LAS+ H + G G + P P P L+ ++ ++W M ++ + MTH GYLKLY LS+P L +YD+V+LDEAQD NPAIA +V Q CAR+LVGD HQ+IYGF+GA+D L+ + GS G V R+LT+ FRFG +A +A ++ GE RP+LG S G +L PGG+ + + P A++AR+ ++++ A +G + WVGGV+ Y L L DLCLL++G+RD V +K F +A V +F DR+ R +++ R + L+ + + + + AADV LSTVHKAKGLE+DTVV+A DF L A R G +G+ + +E+N++YVA+TR KRRL L
Sbjct: 225 PHLQILY-LC-----FNVSVREEAQRGFPKNVTCKSVHQLAYASCGYRFGHKLCSDDLRAED-------------MVSKSLFDPLASTA-------AAGAHSGRKGTSRRQEGGGTAMQRLEGVEACLATL------------RGFLNSADGEVSEKHLPSPRPGILVEGSISEDLVCDLAKELWRRMCD----------------PKDSEVRMTHGGYLKLYSLSKPRL--KYDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQAIYGFLGAQDMLKDQRVQAQGSCGAVIRRQLTRSFRFGPHVADLANFVLRSFVGEARPVLGCGSHEGDIL----------PPGGDTGEGVPQ-RPFAFIARTNTSILKQALRCDEMGWSLEWVGGVKGYKLGLLRDLCLLSMGQRDRVESGRIKAFPSLAAVQNFARRVEDRELVARTELVLRSNAADLLQRLERIEAAAERR-------------------------EKACVAQAADVALSTVHKAKGLEWDTVVVADDFLD----LTAEASRVGLSGSGLTESPTWPGDVQELNMLYVALTRCKRRLQL 707
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: A0A813J487_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J487_POLGL) HSP 1 Score: 230 bits (587), Expect = 3.560e-58 Identity = 190/580 (32.76%), Postives = 269/580 (46.38%), Query Frame = 3
Query: 642 PSMSTLYWICRRRPQFNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKL-SDDLREGDVSDLLEVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWAL----------KVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRG----GSEGRV--RRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGN----------EEEEVNLMYVAVTRTKRRLWL 2300
P + LY +C FNVSVR+EA+ FP NV CK VHQLA+A+ G + KL SDDLR D +V K+L + LAS+ H + G G + P P L+ ++ ++W M ++ + MTH GYLKLY LS+P L +YD+V+LDEAQD NPAIA +V Q CAR+LVGD HQ+IYGF+GA+D L+ + GS G V R+LT+ FRFG +A +A ++ GE RP+LG S G +L PGG+ + + P A++AR+ ++++ A +G + WVGGV+ Y L L DLCLL++G+RD V +K F +A V +F DR+ R +++ R + L+ + + + + AADV LSTVHKAKGLE+DTVV+A DF L A R G +G+ + +E+N++YVA+TR KRRL L
Sbjct: 646 PHLQILY-LC-----FNVSVREEAQRGFPKNVTCKSVHQLAYASCGYRFGHKLCSDDLRAED-------------MVSKSLFDPLASTA-------AAGAHSGRKGTSRRQEGGGTAMQRLEGVEACLATL------------RGFLNSADGEVSEKHLPSSRPGILVEGSISEDLVCDLAKELWRRMCD----------------PKDSEVRMTHGGYLKLYSLSKPRL--KYDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQAIYGFLGAQDMLKDQRVQAQGSCGAVIRRQLTRSFRFGPHVADLANFVLRSFVGEARPVLGCGSHEGDIL----------PPGGDTGEGVPQ-RPFAFIARTNTSILKQALRCDEMGWSLEWVGGVKGYKLGLLRDLCLLSMGQRDRVESGRIKAFPSLAAVQNFARRVEDRELVARTELVLRSNAADLLQRLERIEAAAERR-------------------------EKACVAQAADVALSTVHKAKGLEWDTVVVADDFLD----LTAEASRVGLSGSGLTESPTWPGDVQELNMLYVALTRCKRRLQL 1128
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: UPI001E2DDE3F (UvrD-helicase domain-containing protein n=1 Tax=Marinobacter sp. G11 TaxID=2903522 RepID=UPI001E2DDE3F) HSP 1 Score: 189 bits (479), Expect = 8.820e-48 Identity = 167/542 (30.81%), Postives = 235/542 (43.36%), Query Frame = 3
Query: 687 FNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLL-EVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWALKVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRGGSEGRVRRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATP-CAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHP-LLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGNEEEEVNLMYVAVTRTKRRLWLN 2303
FN ++RDEA FP NV+CK HQLA+AA+GR YA KL+++LR D+++ L +R V+ L F+ S++ +L H P + EP G +L A +W M D + P TH YLKLYQLS PDL + Y +++ DEAQDSNP IVL+Q C + VGD HQ IY F GA + ++ + + LT FRFG ++A VA L+ +LK ETRP++G GA+ G L L T LAR+V ++ VA A G+ + WVGG++AY L+ LEDL AL + VR+ LLK ++ AT D + + +LE D M + V L AD+V+ST H+ KGLE+ +VV+ D+ + D A R E+E+NL+YVA TR + L +N
Sbjct: 54 FNRAIRDEAISKFPRNVECKTSHQLAYAAIGRQYAHKLTNNLRLTDIANALPSPNWTMARDVMAVLNAFITSAEQRILDCHF--PQKQN-----EPQGRTRNRVMYQA------------------------------------------RVLDAAQMIWQRMT-----------------DLDDDFPATHDTYLKLYQLSLPDLSRRYSIILFDEAQDSNPVTNHIVLQQN-CKVIFVGDDHQQIYRFRGASNAMKTSMLEKADMLYLTHSFRFGPQVAMVANALL-MLKQETRPVIGK--------GAE----------GQVLRKLPPNTKQFTALARTVMGVIGVAFSAALSGRSIFWVGGIKAYQLNELEDLFWFALRQPQNVRNKKLLKDYQSFEEYEEIAKATKDPEMLRAIALLETYDDIPHMIGMIRQHTVN--------------------------------LEGNADIVVSTAHRCKGLEWQSVVLVDDYPDIFDPDMAHDAR-------EDEINLLYVAATRALQVLIIN 470
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: A0A2R5GSE2_9STRA (DNA helicase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSE2_9STRA) HSP 1 Score: 192 bits (488), Expect = 3.190e-46 Identity = 189/618 (30.58%), Postives = 270/618 (43.69%), Query Frame = 3
Query: 639 TPSMSTLYWICRRRPQ-------FNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLLEVKL------------------ASSRLVIK------------TLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWAL--KVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRGG-SEGRVRR--LTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPG-----QVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVAR-------HAMAVGK-----RVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGNEEEEVNLMYVAVTRTKRRLWLNPEMR 2315
T +TL R RP+ FNVSV +EA+ FP NVKC +H+L++A VGR Y K+S+DL V E + ASSR++++ + F+AS+D EL H E S A E R P T LV L VW AM + +LPM+ G+LKLYQL PDL + YDV+MLDEAQD P D+V++QR CAR+L+GD +Q+IY F+GA+D L + E R+R L++ FRFG +A VA ++ ++ LLG +RP G K AG + A + ++A A AR+ T+ ++R HA+ V R VGG++A L L DL LAL + EV PL+++F+ I V F + +T L L++ +P++++ A L+ K A V+STVHKAKGLEFD+V + DF ++ + Q + + E+NL+YVAVTR KR L+LN +R
Sbjct: 486 TGKTTTLVNYARLRPETRFLYLAFNVSVGEEARTLFPENVKCTNLHKLSYARVGRKY--KISEDLDARAVQQCDETRDLEHFTVFSVGKTNPSASGASSRVLLRLPKERMCKLVKLAVNAFVASADPELCSTHAEC----SVATLDE----------------------------------EDRAKYRVDPDARLAPATTDLTQLVTKLARNVWAAMCSK-------------------TLPMSSNGHLKLYQLQCPDLARSYDVIMLDEAQDCTPCARDLVMQQRGCARILIGDQNQAIYQFMGAQDALNVKKYYPEARIRSFLLSRCFRFGPNVAAVANGILQHCAHTSQILLG--ARPPVDEAEYSCGVKWDCEAGADTALFATRYEQDAQRSAN-ARAKGTVAFISRSNRGLLEHALRVAHDMPKARFGIVGGLQASPLATLADLARLALRKLSEVESPLVRKFQSIDQVRAFAAKAKESDMSTLLGYLDQIEPETVVSLYARLQ-------------------------------KQIQPWKEARYVMSTVHKAKGLEFDSVYLLSDFQNLVHVDELTQQLNIDSSVDPAEINLLYVAVTRAKRELFLNRSLR 1010
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: UPI00190C5270 (UvrD-helicase domain-containing protein n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190C5270) HSP 1 Score: 176 bits (447), Expect = 1.030e-43 Identity = 159/548 (29.01%), Postives = 238/548 (43.43%), Query Frame = 3
Query: 687 FNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLL-EVKLASSRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWALKVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRGGSEGRVRRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVARHAMAVGKRVAWVGGVEAYNLDALEDLCLLALGRRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPK--SLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRR--GPAGNEEEEVNLMYVAVTRTKRRLWLNPEMR 2315
FN ++ EA SFPANV C+ +H LA+AAVG + K+ LR D++ L +V L + ++ +TL NF+ S+ + EH P A + +L A VW M D ++P+ H GYLKLYQLS P L + YD+++LDEAQD+NP ADIV +Q CA+VLVGD HQSIYGF G D + G+E LT RFG +IA AT L+ +KGE + ++G P + VG + +A P A ++R+ + + A M +RV ++G + L L DL L D ++ P ++F V+ + TGD++ + ++ + K LM +AA + ADV+L T H++KGL+FD V++ DF + D +G R P+ E+E+NL YVA+TR ++ L +N + R
Sbjct: 49 FNKAMATEAAASFPANVDCRTIHSLAYAAVGHAFRHKIGA-LRAIDITQLYADVPLIVATMLERTLSNFMYSASPTVGVEHA----PEHLAFSDR------------------------------------------------------QQLGAAAQHVWRDMI-----------------DPATAVPLPHDGYLKLYQLSGPVLSRRYDIILLDEAQDTNPVTADIVFQQA-CAKVLVGDRHQSIYGFRGNVDVMGMLAGAEPHY--LTHSMRFGDDIAAAATNLLRYMKGEDQTIVGKPG-----MAPNVGR-------------VNDAKPFAIISRTNAGVFKQAIRLMR-DRRVHFIGDMHTTLLGKLSDLHGLWAEETDRIQDPFFRQFADFEAVSRYGRETGDKEVLSLAGVVSQYGAKLPELMTEVAA---------------------------------RACPQPEQADVLLLTAHRSKGLQFDQVMLDDDFQDLVDK----KGHRLIDPSPEFEQEINLTYVAMTRARQTLQVNLQYR 461
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: UPI001F0350FE (F-box DNA helicase 1-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0350FE) HSP 1 Score: 183 bits (465), Expect = 2.390e-43 Identity = 164/543 (30.20%), Postives = 254/543 (46.78%), Query Frame = 3
Query: 687 FNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLLEVKLAS---SRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCPPPTPNELLVWALKVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRGGSEGRVRRLTQVFRFGQEIAHVATTLVGILKG-ETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVA-RHAMAVGK-RVAWVGGVEAYNLDALEDLCLLALG-RRDEVRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLEREDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGNEEEEVNLMYVAVTRTKRRL 2294
+N SV+++A FP NV+ + VH LAFAA+GR Y +K++ +R V + L + A+ ++ V+ T+ NF++SSD + EHV ++ A+TA+ D +++ A+ +W M E + +TH GYLKLYQLS+P + K YD +++DEAQD PA++DI+L QR A++LVGD HQ IYGF GA + + ++ V LTQ FRFG EIA VA++++ ILKG ++ ++G+ +R G G VG A + R+ L A R M K R+ + GG+E+Y LD + D+ L G +E++ +KRF+ + + + D + +++++E K + D +A LR+ L A++V ST HK+KGLEFDTV + +DF +L L R P +E NL+YVA+TR K RL
Sbjct: 681 YNKSVQEQALRRFPENVESRTVHSLAFAALGRKYRRKIAPSIRVNTVMNNLSEENANYLHAKRVVDTVSNFVSSSDEIVSCEHVPWHQFTTPASTAK------------------------------------ERKQLEYFNSYDYK----KKVVADAIDIWEKMTDPTNE----------------DVRITHDGYLKLYQLSKPVI-KNYDCILVDEAQDCTPAVSDILLSQR-LAKILVGDPHQQIYGFRGATNVMAQVEATQ--VYYLTQSFRFGAEIASVASSVLDILKGVRSKNIVGI-ARQGGFGGDHVGQ-------------------IAVICRTNFHLFNNAVRECMQNSKTRIGFAGGIESYRLDRILDIYKLYTGGASNEIKDKFIKRFRSLDELKKYAQKAPDVELCGKVKIVETHTYK-IPDYVARLRQQHCSD------------------------------LDQAEIVFSTAHKSKGLEFDTVRLGEDFMQQLELFNDL--RDAPT----DEKNLLYVAITRAKHRL 1106
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Match: UPI00188882E9 (LOW QUALITY PROTEIN: F-box DNA helicase 1-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI00188882E9) HSP 1 Score: 176 bits (446), Expect = 1.100e-41 Identity = 185/595 (31.09%), Postives = 248/595 (41.68%), Query Frame = 3
Query: 639 TPSMSTLYWICRRRPQ-------FNVSVRDEAKVSFPANVKCKGVHQLAFAAVGRHYAKKLSDDLREGDVSDLLEVKLAS-------SRLVIKTLGNFLASSDHELLPEHVETPHPSSAAATAEPPGWGXXXXXXXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXGRDCP--PPTPNELLVWALKVWNAMKKRPAEGAGGDRSRAWGGDRERSLPMTHAGYLKLYQLSQPDLGKEYDVVMLDEAQDSNPAIADIVLRQRRCARVLVGDSHQSIYGFIGARDHLRGRGGSEGRVRRLTQVFRFGQEIAHVATTLVGILKGETRPLLGLPSRPGQVLGAKVGDPAGWEPGGNALAWLEEATPCAYLARSVSTLVMVARHAMA------VGK---RVAWVGGVEAYNLDALEDLCLLALGRRDE---VRHPLLKRFKGIAGVAHFVDATGDRQWATRLQMLE---REDPKSLMDAIAALRRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPALLAAADVVLSTVHKAKGLEFDTVVMAQDFASMDDLLGALQGRRGPAGNEE--EEVNLMYVAVTRTKRRLWLNPEMRWLM 2324
T STL R RP +N SV D AK +FP NV C H LAF AVG Y KLS +R DVS L+ V L++ ++LV+ +L NFLAS D ++ HV P A E GR P P + + A ++W MK R + MTH GYLKLYQL QP LG YD + +DEAQD NPA+ +VLRQ CA++LVGD HQ IY F A D L + LTQ FRFG EI +VA+ + + KG T + G + G G A LARS L +A + +G R A+VGG++ Y + D+ L + V+ P +KRF + + + D +T++ + E P+ + + LR G A+VV STVHKAKGLEFDTV++A DF + D + PA N E EE +L+YVAVTR +R L L+ + +L+
Sbjct: 239 TGKTSTLVEYARLRPAAKFLCIVYNRSVCDIAKRTFPPNVTCTTAHSLAFRAVGFLYKAKLSAKIRVLDVSKLVPVPLSTRMPRLRFAKLVLSSLENFLASVDLQITVAHV----PDHVVALEE--------------------------------------------YGRPVPVHPTDQSAVCEAASQLWARMKDR----------------NDVEARMTHDGYLKLYQLRQPSLGS-YDAIFVDEAQDCNPAMLSLVLRQP-CAKLLVGDPHQQIYSFRHAIDALSTVPATH--TFCLTQSFRFGPEIGYVASCALEVFKGITNKTIVGTEMSGSIHGPLSGQ-------------------VAVLARSNLVLFNMAVDVVCNEGYKKLGLSHVRGAFVGGIDGYGFQQILDIYYLMYWPEEAPSMVQDPFIKRFTSYGSLFKYAHSVEDLDLSTKVSFVNDHNHEVPRYVKTLM--LRCTGDQRL--------------------------------ANVVFSTVHKAKGLEFDTVLLADDFYTEDI-------SQPPARNPENLEEYHLLYVAVTRARRCLRLSRALYFLL 705 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1185.1 >prot_S-ischiensis_contig1.1185.1 ID=prot_S-ischiensis_contig1.1185.1|Name=mRNA_S-ischiensis_contig1.1185.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=729bp MSAAMLAMPRWCRFMVYWGRRVAVDFMWEVLPLRTFDFIWEVSTPTPSMSback to top mRNA from alignment at S-ischiensis_contig1:7994186..8002401+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1185.1 ID=mRNA_S-ischiensis_contig1.1185.1|Name=mRNA_S-ischiensis_contig1.1185.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8216bp|location=Sequence derived from alignment at S-ischiensis_contig1:7994186..8002401+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7994186..8002401+ >mRNA_S-ischiensis_contig1.1185.1 ID=mRNA_S-ischiensis_contig1.1185.1|Name=mRNA_S-ischiensis_contig1.1185.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=4374bp|location=Sequence derived from alignment at S-ischiensis_contig1:7994186..8002401+ (Schizocladia ischiensis KU_0333)back to top |