mRNA_S-ischiensis_contig1.1164.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A6H5KWQ1_9PHAE (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ1_9PHAE) HSP 1 Score: 452 bits (1163), Expect = 1.610e-146 Identity = 244/530 (46.04%), Postives = 324/530 (61.13%), Query Frame = 1
Query: 145 ELERVLRAMGVYEDASRSNKRKASHTATFNPPRPDHVIRCRVGLA*NIENRVSVVARLPDLCQTVMETMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKD-WNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNPEVGARGPGWRCSSFFIGLAPGDVNQ--------LDLSPAWRDFIMKVQPF---EGRTAAMDVDIHIRRGTELPEFCFPEGQVRRPGNRLQP 1698
EL++ L+AMG+YE+A +R+A V+ ++ LVK+WS ++A ++ GLD+ V +AT++ FGSY LGV TPDADID+L L P HC+RE FF+SF +L ++EL PV EA+ PV+KF GV +D+LFCSL Y KLP NV HL LD+ A +LNG+RV+E+IL ++PNHE FR TLRA+KEWARRRGIYSNVLGCLGGVN+AI+V FV + +P+ P L+ K F + +WKWPN + LN ++ +L N T L WNP + +D LMPI+TPAYP MNSSYNVGEPQ+R+IR+E RG IT + W LF R+DFFWRF YVQVD+ A +A D+R+WFGW+ESRMR +V +D +EA PF N L NP + G +SFFIGL ++ + +DL+PAWRDF+M+V + R M+VD+ G LP+FCFPE QVRR R++P
Sbjct: 30 ELKKFLKAMGLYENAEGRTRRQA-----------------------------------------VLRMLLNLVKEWSGKIAAEE--GLDKEEVSTATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRQCNVHVEEHLRYLDD-AGVRSLNGVRVAELILSLVPNHEAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLN---ELQSLQE-TNATEGHPFPLHTVWNPVSNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEFARGWRITKGISLGVANWANLFERSDFFWRFELYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGAVGNSFFIGLGFPEIAKGRSPAGVPVDLTPAWRDFMMRVDSWGDRRRRREGMEVDVKAVHGVHLPDFCFPEDQVRR---RMRP 508
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: D7FQE0_ECTSI (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE0_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 7.990e-141 Identity = 232/502 (46.22%), Postives = 306/502 (60.96%), Query Frame = 1
Query: 145 ELERVLRAMGVYEDASRSNKRKASHTATFNPPRPDHVIRCRVGLA*NIENRVSVVARLPDLCQTVMETMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNPEVGARGPGWRCSSFFIGLAPGDVNQ--------LDLSPAWRDFIMKVQPF---EGRTAAMDVDI 1617
ELE+ L+AMG+YE+A S +RKA V+ ++ LVK+WS ++A ++ GLD+ V AT++ FGSY LGV TPDADID+L L P HC+RE FF+SF +L ++EL PV EA+ PV+KF GV +D+LFCSL Y KLP NV HL LD+ A +LNG+RV+E+IL ++PNH+ FR TLRA+KEWARRRGIYSNVLGCLGGVN+AI+V FV + +P+ P L+ K F + +WKWPN + LN ++ +L N WNP + +D LMPI+TPAYP MNSSYNVGEPQ+R+IR+EI RG IT + W LF R+DFFWRF YVQVD+ A +A D+R+WFGW+ESRMR +V +D +EA PF N L NP + G +SFFIGL +V +DL+PAWRDF+M+V+ + R M+VD+
Sbjct: 30 ELEKFLKAMGLYENAEGSKRRKA-----------------------------------------VLLMLLKLVKEWSGKIAAEE--GLDKEEVSPATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDD-AGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLN---ELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERSDFFWRFELYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGAVGNSFFIGLGFPEVANGRSPSGVPVDLTPAWRDFMMRVELWGDRRRRREGMEVDV 484
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A836C8Y5_9STRA (Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y5_9STRA) HSP 1 Score: 405 bits (1040), Expect = 9.370e-133 Identity = 218/463 (47.08%), Postives = 294/463 (63.50%), Query Frame = 1
Query: 133 QSAAELERVLRAMGVYEDASRSNKRKASHTATFNPPRPDHVIRCRVGLA*NIENRVSVVARLPDLCQTVMETMMILVKKWSAELATKKRLGLDEASVRS-ATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIA-MLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNPEVGARGPGWRCSSFFIGLA 1515
+S A+LE+VL+A G +E A + +R+ SV+A L + Q +WS +L + G++E +V+S AT+R FGSY LGV TPDADID L+L P HC REDFF+SF LA V E+ PV EA+ PV+KF + V VD+LFCSL++ +LP PL+V ++ HL DLD + S LNG+RV+E+IL ++PN FR LRAIKEWARRRGIYSNVLGCLGGVN+AI+V FVC+ +P+ P L+ ++F+ + KW WP PI++ T + A T V WNP+ +D LMPI+TPAYP MNSSYNVGEPQLR++++EI RGL +T ++Q+ W ELF +DFF+RF +YVQVDV+A N D+R WFGW+ESR+R L + ++ PP+L A P+AN + A GP C+SFFIGL+
Sbjct: 37 ESTAQLEQVLQACGCFETAEQKARRE------------------------------SVIADLEAMAQ-----------QWSKDLGRSR--GIEEQAVQSVATLRTFGSYRLGVNTPDADIDCLLLCPRHCAREDFFNSFCRDYLATRDDVSEVFPVPEAYTPVMKFKMRDVPVDMLFCSLQHAQLPRPLDVQEDRHLRDLDAEGVRS-LNGVRVAELILQLVPNQTTFRTALRAIKEWARRRGIYSNVLGCLGGVNWAILVAFVCQKYPNAAPSTLLHRLFRLYFKWSWPMPILITPTREEPA----EGCTPHAV-----WNPKVDLRDRAHLMPIVTPAYPAMNSSYNVGEPQLRLLKEEIARGLELTEKIQEERSHWAELFEPSDFFYRFQHYVQVDVLADNPEDHRRWFGWIESRLRHLTLALERPPQLLAHPYANTIFQRVAAASGPPQLCTSFFIGLS 446
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A1V9YEI6_9STRA (Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEI6_9STRA) HSP 1 Score: 343 bits (879), Expect = 1.360e-107 Identity = 193/450 (42.89%), Postives = 272/450 (60.44%), Query Frame = 1
Query: 325 LCQTVMETMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNP--EVGARGPGWRCSSFFIGL---APGDVNQ--LDLSPAWRDFIMKVQPFEGRTAAMDVDIHIRRGTELPEFC 1653
L + + T+ LV++W+ + A K + L+ + R + VR FGSY LGV +P+ADID L L P HC R +FF +F + L P V + V +A+VPV+KF + G+ +DLLF +L + +P L+VLD+ HL ++DEQ S LNG RV+EMIL ++PN E FR TL A+K WAR RGIYSNVLG LGGVN+AI+V VC+ +P L L+ K ++ + +W WPNPI+LN D L + WNP+ + +D LMPI+TPAYP MNSSYNV E L +++ E A + ++ + W ELF FF R+ +++Q+DV A+ A+ + VWFGWVESR+R L ++ P L+ PFA D P + GA G SS FIGL P + +DL+ A +DF + + GRT+ MDV +H +R ELP +
Sbjct: 60 LREKALGTVKSLVEEWAVDEAAKAGVTLEAPATRFSQVRTFGSYRLGVHSPEADIDTLCLMPRHCLRINFFQAFPSRLQAHPAVTGVQSVPDAYVPVIKFKVHGISIDLLFVTLALSAVPSDLDVLDSKHLVEVDEQGVRS-LNGCRVAEMILQLVPNLEQFRTTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGPLLTKFYRVYHQWTWPNPILLN-RLDAPQ----------PELAIASWNPKLNPRDRGHLMPIITPAYPAMNSSYNVLECTLHMMKAEFRTAAATCVDIEMQSAPWEELFDDATFFDRWDHFLQLDVSAAPAQ-FAVWFGWVESRLRQLFSRLEQVPDLQVFPFARVFDLPPCDDGASG-----SSLFIGLNFTVPRGATRFSVDLTAAIQDFAALLDTWLGRTSDMDVTVHYKRRAELPPWA 491
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A067CCL2_SAPPC (Poly(A) polymerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCL2_SAPPC) HSP 1 Score: 335 bits (858), Expect = 1.480e-104 Identity = 189/454 (41.63%), Postives = 271/454 (59.69%), Query Frame = 1
Query: 331 QTVMETMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLD-NPEVGARGPGWRCS--SFFIGL---APGDVNQ--LDLSPAWRDFIMKVQPFEGRTAAMDVDIHIRRGTELPEFCFPEGQ 1668
+ ++ + LV++W+ A K + L+E + + +R FGSY LGV +P+ADID L L P HC R FF +F + L P V + V +A+VPV+KF L G+ +DLLF +L +P ++VLD +L D+DE S LNG RV+EMIL ++PN E FR TL A+K WAR RGIYSNVLG LGGVN+AI+V VC+ +P L L+ K F+ + +W WPNPI+LN + ++ D L + WNP+ + +D LMPI+TPAYP MNSSYNV E L +++ E A + ++ + V W +LF + FF R+ +++Q+DV+A+ A + WFGWVESR+R L ++ P ++ PFA D PEV G CS S FI L P + +DL+ A +DF V + GRT+ MDV +H +R + LP + + Q
Sbjct: 49 EKALDVVRGLVEEWATAEAAKLGVTLEEPATCFSQIRTFGSYRLGVHSPEADIDTLCLMPRHCLRTSFFQTFPSRLQEHPEVASVQSVPDAYVPVIKFKLSGISIDLLFATLNVAAVPVDIDVLDVKYLVDVDEPGVRS-LNGCRVAEMILQLVPNIEQFRTTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWTWPNPILLNRI----------DESLGD-LSIPTWNPKLNPRDRSHLMPIITPAYPAMNSSYNVLESTLAMMKSEFRSAAATCVDIEIQSVPWEDLFEDSTFFKRWDHFLQLDVLAATA-SFPAWFGWVESRLRQLFSRLEQVPDVQIFPFARVFDLPPEVLDEG----CSGGSLFIALNFTVPRGATRFSVDLTAAVQDFAALVDTWLGRTSDMDVTVHYKRRSALPSWVLTQTQ 485
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A7S2GC92_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC92_9STRA) HSP 1 Score: 334 bits (856), Expect = 5.750e-103 Identity = 181/439 (41.23%), Postives = 263/439 (59.91%), Query Frame = 1
Query: 403 GLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFS----SFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLF-CSLRYTKLPHPLN-VLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLD------------NPEVGA--RGPGWRCSSFFIGL--APGDVNQLDLSPAWRDFIMKVQPFEGRTAAMDVDIHIRRGTELPEFC 1653
G D AS SA + FGSYAL +PDADID+L + P HCTR DFF S A L +P V EL V EA+ PV+KF + GV +D+LF C + LP P +L + HL LD+ + +LNG RV+ +L ++P+ + FR LRA K WAR RG+YSNVLG LGG+N+AI+V F+C+ +P +P L+ + F+ + +W+WP PI+L ++ + + WNP+ + +D LMPI+TP+YP MNSSYNVGEPQLR +R+EI RG+ +T ++ W+ELF+ +FF ++ +Y+QVDV A +A +R WFGW ESR+R L++ +D PP ++A P A + V A G G +SF++ L APG V Q DL+ + D++ ++ ++ R MD+ I+ R LP +C
Sbjct: 28 GDDGASTLSAHLISFGSYALNCHSPDADIDVLCIAPQHCTRADFFGTGPGSLHARLVADPSVAELLAVPEAYTPVLKFRMRGVSIDMLFACMPAHKVLPSPPEAILRDQHLKGLDD-CTIRSLNGARVTRTLLTLVPDPDRFRTALRATKAWARARGVYSNVLGYLGGINWAILVAFICQRYPSAVPSTLLSRFFRVYHQWQWPAPILLKSIHEEHPEGMF----------CQVWNPKVYPRDRAHLMPIITPSYPEMNSSYNVGEPQLRSLREEIARGVELTFAIEQGKAVWSELFIGHNFFAQYQHYIQVDVSAHDAAAHRAWFGWCESRLRQLVLCLDQPPSVQAHPHAEFFEWTATRGSKERRPRSAVAATPEGGGVIGTSFYVALSFAPG-VRQADLTASISDWVYRMNMWDRRQPGMDLSINHVRAKNLPAYC 454
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A024TBD6_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBD6_9STRA) HSP 1 Score: 327 bits (837), Expect = 2.950e-101 Identity = 177/452 (39.16%), Postives = 272/452 (60.18%), Query Frame = 1
Query: 331 QTVMETMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNPE-------VGARGPGWRCSSFFIGLA---PGDVNQ--LDLSPAWRDFIMKVQPFEGRTAAMDVDIHIRRGTELPEF 1650
+ +E + V++W+ ATK+ L +D S+ +R FGSY LGV +P+ADID L L P HC+R FF+SF +L + V + + +A+VPV+KF ++GV +DLLF +L +P +++LD L D+DE S LNG RV+EMIL ++PN + FR+TL A+K WAR RGIYSNVLG LGGVN+AI+V VC+ +P L L+ K F+ + +W WPNPI+LN D +++ L+ WNP+ + +D LMPI+TPA+P MNSSYNV + LR+++ E + + + ++ + + W ELFL + FF R+ +++++DV +S+ + WFGWVESR+R L ++ ++ PFA D P + G SS F+GLA P + + +D + A ++F + + RT+ MD+ +H R T+LP +
Sbjct: 50 ENALELVGAWVEQWAQNEATKRGLVVDATSLTQ--IRTFGSYRLGVHSPEADIDTLCLAPRHCSRLGFFTSFPLLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVPEDIDLLDPKTLRDVDEPGVRS-LNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNIMDDDGKH-------AELHHLQSWNPKLYPRDRLHLMPIITPAFPAMNSSYNVLDCTLRLMQAEFRQAATVCVDIELQSLPWEELFLESSFFNRWEHFLRIDV-SSDPAHFTSWFGWVESRLRSLFGRLEQMEDVDIAPFARFYDIPTDDQTDTATSSTSTGVTSSSCFVGLAFHLPDNAQRFSVDFTAAVQEFAAVLDLWPQRTSDMDLQVHYVRRTQLPRW 490
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: W4GGY7_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGY7_9STRA) HSP 1 Score: 325 bits (833), Expect = 1.230e-100 Identity = 178/462 (38.53%), Postives = 267/462 (57.79%), Query Frame = 1
Query: 331 QTVMETMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELC-PVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNP--------EVGARGPGWRCSSFFIGLA---PGDVNQ--LDLSPAWRDFIMKVQPFEGRTAAMDVDIHIRRGTELPEFCFPEGQVR 1674
+ +E + V+ W+ ATK+ L +D A+ R +R FGSY LGV +P+ADID L L P HC+R FFSSF + L + V + +A+VPV+K ++GV +DLLF +L +P +NVLD L D+DE S LNG RV+EMIL ++PN + FR+TL A+K WAR RGIYSNVLG LGGVN+AI+V VC+ +P L L+ K F+ + +W WPNPI+LN D A +LGL WNP+ + +D LMPI+TPAYP MNSSYNV + LR+++ E + + + ++ + + W ELF+ ++FF R+ +++++D+ +S+A + WFGWVE R+R ++ ++ PFA D P F+GLA P + + +D + A ++F + + RT+ MD+ +H R +LP + V+
Sbjct: 50 ENALELVGDWVEHWAQAEATKRGLLIDGATTRLTQLRTFGSYRLGVHSPEADIDTLCLAPRHCSRLGFFSSFPSFLKQQSQVTAAVHAIPDAYVPVIKLEVLGVAIDLLFVTLDVASVPEDINVLDTNTLTDVDEPGVRS-LNGCRVAEMILQLVPNIDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPHSLAGTLLTKFFRVYHQWIWPNPILLNNVMDDDA---------DQLLGLTSWNPKVYPRDRLHLMPIITPAYPAMNSSYNVMDSTLRLMQAEFRQAATVCVDIELQSLPWEELFVESNFFDRWEHFLRIDI-SSHASQFTAWFGWVECRLRSFFGRLEQMEDVDIAPFARFYDIPGDSDSTXXXXXXXXXXXXXXXXFVGLAFHLPDNAQRFSVDFTMAVQEFAAVLDMWPQRTSDMDLQVHYVRRNQLPSWIVRPSTVQ 500
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: W2RDI5_PHYPN (Poly(A) polymerase n=14 Tax=Phytophthora TaxID=4783 RepID=W2RDI5_PHYPN) HSP 1 Score: 324 bits (830), Expect = 3.620e-100 Identity = 187/445 (42.02%), Postives = 261/445 (58.65%), Query Frame = 1
Query: 379 ELATKKRLGL---DEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNPEVGARGP--GWRC----SSFFIGL-------AP--GDVNQLDLSPAWRDFIMKVQPFEGRTAAMDVDI-HIRRGTELPEFCF 1656
E A + LGL EA+V+ +R FGS LGVQ+ +ADID L + P HCTR FF +L V L + +AFVPV+K + G+ VDLLF SL +P L++LD+ L +DE AS + NG+RV+E IL ++PN E FR TL A+K WAR RGIYSNVLG LGGVN+AI+V +C+ +P+ LP L+ + F+ + W WPNPIML+ R +N LG WNP+ + +D LMPI+TPAYP +NSSYNV LRI++ E+ RG T+ ++ + WT+LF+ FF R ++++V + A+NA D+ WFGWVESR+R L + ++ P + PFA D E P +C S FIGL AP G + +DL+ RDF + +EGR MD+ I H+ R +++PE+
Sbjct: 59 EYALHEGLGLYSEAEAAVKRVQLRTFGSCRLGVQSCEADIDTLCVAPRHCTRTSFFEKAPILLEAASSVTGLRVISDAFVPVIKMQVDGIPVDLLFVSLDLDSVPEDLDMLDDQILRGMDE-ASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGGVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLD---------RVDNPL---NLGFSGWNPKINVRDRLHLMPIITPAYPALNSSYNVMASTLRILKAELGRGFDRTLEIETKKASWTKLFVAPVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLEALPDIRIHPFARFFDFVETKDESPESSSKCEVHTSWLFIGLKFPAPTAAPVTGATHNVDLTGVIRDFALYTDQWEGRHGGMDMQIDHVTR-SQIPEWVL 489
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Match: A0A6A3E1X3_9STRA (Poly(A) polymerase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E1X3_9STRA) HSP 1 Score: 323 bits (827), Expect = 9.820e-100 Identity = 179/436 (41.06%), Postives = 254/436 (58.26%), Query Frame = 1
Query: 397 RLGLDEASVRSATVRPFGSYALGVQTPDADIDLLVLTPCHCTREDFFSSFIAMLAMEPGVEELCPVKEAFVPVVKFTLIGVHVDLLFCSLRYTKLPHPLNVLDNIHLHDLDEQASTSNLNGLRVSEMILDIMPNHENFRVTLRAIKEWARRRGIYSNVLGCLGGVNFAIMVGFVCRSFPDELPPFLVLKVFQWFMKWKWPNPIMLNVTYDVSALSRYNNRTISDVLGLKDWNPRHHEQDAKDLMPILTPAYPRMNSSYNVGEPQLRIIRQEITRGLAITMRVQDRGVEWTELFLRTDFFWRFSYYVQVDVMASNARDYRVWFGWVESRMRGLMVNIDDPPRLEATPFANHLDNPEVGARGP--GWRC----SSFFIGL---APGDVN------QLDLSPAWRDFIMKVQPFEGRTAAMDVDI-HIRRGTELPEFCF 1656
R G EA+ R +R FGSY LGVQ+ +ADID L + P HCTR FF +L P V L + +AFVPV+K + G+ VDLLF +L +P ++VLD+ +L LDE +S + NG+RV+E IL ++PN E+FR TL A+K WAR RGIYSNVLG LGGVN+AI+V +C+ +P+ LP L+ + F+ + W WPNPIML+ R +N LG WNP+ + +D LMPI+TPAYP +NSSYNV L I++ E +G T+ ++ + W +LF+ FF R ++++V + A+NA D+ WFGWVESR+R L + ++ P L PFA D E P C S ++GL AP ++ +DL+ RDF +E R MD+ I H+ R +++PE+
Sbjct: 62 RFGESEAATRRVQLRTFGSYRLGVQSQEADIDTLCIAPRHCTRASFFEKAPILLEATPSVTGLQVISDAFVPVIKMKMDGIPVDLLFVALDLDSIPEDIDVLDDRYLRGLDE-SSVRSCNGVRVTERILQLVPNQEHFRTTLIAVKHWARVRGIYSNVLGFLGGVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLD---------RVDNPL---NLGFSRWNPKINVRDRLHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIAPVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLEALPELRIHPFARFFDFVETKGVTPEGSTECEVHTSWLYVGLGFPAPDPISATDGTHDVDLTSVIRDFAYYTDQWEARHGGMDMQIDHVTR-SQIPEWVL 483 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1164.1 >prot_S-ischiensis_contig1.1164.1 ID=prot_S-ischiensis_contig1.1164.1|Name=mRNA_S-ischiensis_contig1.1164.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=493bp METMMILVKKWSAELATKKRLGLDEASVRSATVRPFGSYALGVQTPDADIback to top mRNA from alignment at S-ischiensis_contig1:7878308..7886549+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1164.1 ID=mRNA_S-ischiensis_contig1.1164.1|Name=mRNA_S-ischiensis_contig1.1164.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8242bp|location=Sequence derived from alignment at S-ischiensis_contig1:7878308..7886549+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7878308..7886549+ >mRNA_S-ischiensis_contig1.1164.1 ID=mRNA_S-ischiensis_contig1.1164.1|Name=mRNA_S-ischiensis_contig1.1164.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2958bp|location=Sequence derived from alignment at S-ischiensis_contig1:7878308..7886549+ (Schizocladia ischiensis KU_0333)back to top |