mRNA_S-ischiensis_contig1.1156.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A835Z0R4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R4_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.200e-96 Identity = 161/244 (65.98%), Postives = 187/244 (76.64%), Query Frame = 2
Query: 365 MMMATGLRGDVTDKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFRLNRRYRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSFFPLETYGAYDSDEG-GGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIEE 1093
MM ATG+RGD+ DKLGLNGRRDIDR+A IL LV+ SFLSST+LI+ +PGPDIVRF+ASW++AF PY FL+LG+AKPALLQ LV+ F +N YRERL RHEAGHFL GYLCGMP+ESY+ADSVTNAV+FFP Y SD I E +LLRL VSLGG+VAE + FG SEGGYADLMQL LL +++LS REQ+DR RFAAVMAH+YL TH AL L A R SV CIR IE+
Sbjct: 1 MMAATGIRGDIIDKLGLNGRRDIDRIAFILFGLVVGSFLSSTSLIEFLPGPDIVRFTASWVIAFIPYGFLTLGIAKPALLQKSLVKAFSVNPEYRERLARHEAGHFLVGYLCGMPIESYQADSVTNAVAFFPA----FYSSDAMLRRIPEPELLRLAAVSLGGIVAECLRFGTSEGGYADLMQLNALLRCGEERLSDREQQDRVRFAAVMAHSYLKTHGDALDRLTAAVQRSASVTDCIRAIED 240
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A7S4D6I6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6I6_HETAK) HSP 1 Score: 246 bits (629), Expect = 1.430e-72 Identity = 148/348 (42.53%), Postives = 209/348 (60.06%), Query Frame = 2
Query: 224 GWSALESAMDSSNGTH--VRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLRG--DVTDKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFR-LNRRYRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSFFPL-------------------------------------ETYGAYDSD----------EG------GGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIEE 1093
GWS LE AM SS V ++ M+ GD+ L+NST ++Y+R VG + M T +RG D+ LGL+G+ DID++A+IL A+++ S LSS T++Q +PGP+IVR+S +WL+AF PY +L+LGL+ PA+LQ L+Q+FR ++ YRERL+ HEAGHFL GYL GMPV+SY AD+ NAV F+PL + + + D EG G ++ D L RL V SL GV+AE ++ G EGGYADL+QLQ+ L +++L+ ++Q++ R+ AV A T L RA L AL++AF R SV +C+RVIEE
Sbjct: 22 GWSTLEQAMSSSECQREDVVAIMEIMKSNGDINLWNSTFLYYQRYGVGDVRMLTRIRGEKDLIQTLGLDGKSDIDKIASILFAVIVGSILSSLTVLQNLPGPEIVRWSVTWLLAFAPYGYLALGLSFPAVLQRLLIQIFRAVDPAYRERLLYHEAGHFLVGYLVGMPVQSYSADAPINAVQFYPLAGLPQEIKQRSRNTEIPPESVKRNAKEEEEMSIEKLRQLWTKINQDPNGPTRRAVEEGAAIGRRGALSLDQLQRLTVTSLAGVMAEVVQLGEGEGGYADLVQLQNFLYFCEQRLTDQQQQEYVRWGAVQAFTLLEVRRAELAALVEAFRRGASVPECLRVIEE 369
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A7S0XV52_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XV52_HEMAN) HSP 1 Score: 165 bits (417), Expect = 7.010e-43 Identity = 107/283 (37.81%), Postives = 163/283 (57.60%), Query Frame = 2
Query: 272 VRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLRGDVT-DKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDI-------VRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFRL-NRRYRERLVRHEAGHFLTGYLCGMPVESYRAD-SVTNAVSFFPLETYGAYDSDEGGGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIE 1090
V + L + G+ ++N+T +RR+ G++ M T RG + D + G D++ ++ A + S L ST AIP D+ RF + + TP+AFL +GL+ P LLQA L+Q RL + +R+RL+RHEAGHFL GY G+P+ Y+AD ++ NA FF ++D+ ++ D + L VS+ GVVAE++ + GGYADL QLQ LS + L+ +EQ++R R+ +V+A+T L TH A AL++ R ESV C++VIE
Sbjct: 15 VMKALNDAKGAGEAAVWNNTQPMFRRVRQGEVRMLT--RGVIKEDTIDTRGDDDMEVLSTSFYATLATSMLLSTWASIAIPNMDLPFLRGSDTRFFVTIAIGSTPFAFLGMGLSLPGLLQAILIQARRLVSGEFRDRLIRHEAGHFLVGYCLGVPIAEYKADDAILNACQFFE----DSFDTGPARRLSHDQVDTLCAVSMAGVVAESITYEKGLGGYADLSQLQGFLSRATPILNDKEQQERVRWGSVLAYTVLRTHGEAFEALVECMGRGESVESCVKVIE 291
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A7S4KRX3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KRX3_GUITH) HSP 1 Score: 165 bits (417), Expect = 6.030e-42 Identity = 111/284 (39.08%), Postives = 164/284 (57.75%), Query Frame = 2
Query: 272 VRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLRGDVT-DKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPG--------PDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFRL-NRRYRERLVRHEAGHFLTGYLCGMPVESYRADS-VTNAVSFFPLETYGAYDSDEGGGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIE 1090
V + L S++E L +++S YRR+ VG++ + T RG V D L+G D++ + A +++S L ST IP D++R+ ++ + P+AFL +GL+ P LLQ L+Q+ R ++ YRERL+ HEAGHFL GY G+P+ +Y AD + NAV FF DS+E I+ + L L VS GVVAE + FG++ GGYAD QLQ L S+ +L+ REQ++R R+ V A T L +L+AL++A R+ S+ QCI IE
Sbjct: 92 VVDALNSLKERSQLSMWDSVPSLYRRVSVGEVRLLT--RGLVKEDTFDLSGNNDMEVLNVSFYATLLSSMLLSTLAACFIPEYPNLPFLQGDLLRYVVTFGLGSLPFAFLGMGLSVPGLLQLVLIQIRRAASQEYRERLLWHEAGHFLVGYCLGLPIAAYSADDPILNAVQFF--------DSEEDS-ISHEFLDVLCAVSTAGVVAEAIRFGDAIGGYADFSQLQSFLYRSRPRLNDREQQERVRWGCVAAFTILKNREESLKALIEAMSRKSSISQCILAIE 364
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A7S0V097_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V097_9CRYP) HSP 1 Score: 157 bits (397), Expect = 4.010e-40 Identity = 110/281 (39.15%), Postives = 159/281 (56.58%), Query Frame = 2
Query: 251 DSSNGTHVRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLRGDVT-DKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDI-------VRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFR-LNRRYRERLVRHEAGHFLTGYLCGMPVESYRA-DSVTNAVSFFPLETYGAYDSDEGGGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRES 1063
D G VR+ L ++ G+ ++NST +RR+ G++ M T RG + D + G D++ ++ A + S ST AIP DI VRF + + +P+AFL LGL+ P LLQA L+Q R ++ +R+RLVRHEAGHFL GY G+P+ Y A D++ NA FF A+D+ +T + + L VS+ GVVAE++ + GGYADL QLQ LS + L REQ+D+ R+ +V+A+T L TH AL AL++A R S
Sbjct: 12 DGWTGQLVRKALNDAKQAGEATVWNSTQPMFRRVRQGEVRMLT--RGVIKEDTIDTRGDDDMEVLSTSFYATLATSMALSTWASIAIPNMDIPFLRGSDVRFFVTIAIGSSPFAFLGLGLSLPGLLQAILIQARRAVSGEFRDRLVRHEAGHFLVGYCLGVPIAEYAAGDAILNACQFFE----DAFDTPARR-LTHNQVDTLCAVSMAGVVAESLAYDKGLGGYADLSQLQGFLSRATPILDDREQQDKVRWGSVLAYTVLRTHGGALEALVEAMGRGAS 285
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: W7TKF4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF4_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.000e-39 Identity = 108/298 (36.24%), Postives = 157/298 (52.68%), Query Frame = 2
Query: 305 GDLRLFNSTVMFYRRMDVGQMMMATGLRGDVTDKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQ-LFRLNRRYRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSF-----FPLETYGA----YDSDEGGG-----------------------ITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIEEAG 1099
G LR +NS + + + + + +R V LG ++RV + + ++ S S+ T + +PGPDIVR+ A+ + P+A++SLGL+ P +L Q LF LNR Y+ERL+RHEAGHFL GYLCG+PV SY NAV F F E A DS E G + +++L RL VVSL GVV+E + +G +EGG DL QL L +L+ +S REQ + + ++ + + AL ALM AF R ESVV C++++E+ G
Sbjct: 172 GFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEG 469
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A7S3AC95_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC95_9RHOD) HSP 1 Score: 155 bits (392), Expect = 7.270e-39 Identity = 103/279 (36.92%), Postives = 161/279 (57.71%), Query Frame = 2
Query: 272 VRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLRGDVTDKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFRLNRR--YRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSFFPLETYGAYDSDE--GGGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIEEA 1096
RELL + E+GDL+ +N + R + + ++ M L D LGL + ID A + +S L+ L QA+ D+ FS S+L+ AFL++G P LL A L+ N R ++ERL+ HEAGHFL GYLCG+PV+ Y + +T V+ F G + +++ G ++ DD+ L VV+L G AE +++G +EGG ADL LQ+LL ++ + +EQ+++TR+ A+MA+T L + A AL++A ++SV CI+ IE+A
Sbjct: 69 ARELLDGLSEQGDLKKWNRQKLSVRPVSIAELKMNARLDAD---SLGLTQKNTIDLKLASFAVIGGSSLLA--VLCQAVFSGDLAYFS-SYLIGGLSIAFLAIGSTAPGLLTA-LITTISANLRPDFKERLLLHEAGHFLAGYLCGVPVKKYDVNPITTGVTIFG----GKFLTEDVAQGRVSRDDVNALSVVALAGPAAEVIKYGQAEGGMADLNLLQNLLVRTKPPMLSKEQQEQTRWGALMAYTVLKKYSAEYEALVEAMKAKKSVADCIKAIEQA 336
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A7S2SMI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMI0_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.110e-37 Identity = 84/172 (48.84%), Postives = 115/172 (66.86%), Query Frame = 2
Query: 260 NGTHVRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLR---GDVTDKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFRLNR-RYRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSFFPL 763
+G R +L+++RE+G RL+NST + R V + + T R GD+ KL ++G RD+DR+AA L A SF ++ + +PGP+ +RF+ WL+ FTPY FLSLGLA P LQ GL+Q+ RL YR+RL+RHEAGHFL GYL G+PV SY A++V NAV F+PL
Sbjct: 14 SGETARSMLKALREDGQARLWNSTALVGSRR-VSEAELRTLARIPGGDLISKLNIDGGRDVDRIAAGLLATTGISFTLASQAVS-LPGPESLRFALVWLLTFTPYIFLSLGLALPGSLQTGLIQVQRLALPTYRDRLLRHEAGHFLVGYLIGLPVRSYSANAVANAVQFWPL 183
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A5J4YTJ7_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTJ7_PORPP) HSP 1 Score: 153 bits (387), Expect = 5.950e-37 Identity = 102/286 (35.66%), Postives = 153/286 (53.50%), Query Frame = 2
Query: 245 AMDSSNGTHVRELLRSMREEGDLRLFNSTVMFYRRMDVGQMMMATGLRGDVTDK-LGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQLFR-LNRRYRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSFFPLETYGAYDSDEGGGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQRDRTRFAAVMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIEEA 1096
A+D ++ +V L M+E+G L+ + S R + +M + T R VT K L G D + A++ S S+ + Q +PGPD+VR++A++ V PY FL G++ P LLQ L+ R ++ +R RL HEAGHFL GYL G+PV Y+AD+V NAV F+ + A + T + + L ++SL GVV+E + F + GGYAD MQLQ + + S L R + + R+ V A+T L + AAL L + +CI IE+A
Sbjct: 185 AIDWTDRENVVSKLEEMKEQGLLKKYGSAQTLARPISFQEMQLLT--RRKVTPKTLDFKGEGDKSAITVSFFAVLALSISSALAIEQYLPGPDVVRYAAAFSVGGLPYVFLLFGISVPDLLQFALILARRTFSKEFRTRLAAHEAGHFLVGYLLGVPVREYKADAVMNAVQFY-FDFEEAQQDSKPLRFTHEQVDELAIISLAGVVSEILLFKQASGGYADFMQLQRVANRSVPPLEPRAVQAKVRWGCVRAYTLLQQNAAALEQLTAKMAVGRPLDECIAAIEDA 467
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Match: A0A4D9DAM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAM4_9STRA) HSP 1 Score: 147 bits (370), Expect = 9.430e-35 Identity = 106/323 (32.82%), Postives = 160/323 (49.54%), Query Frame = 2
Query: 305 GDLRLFNSTVMFYRRMDVGQMMMATGLRGDVTDKLGLNGRRDIDRVAAILGALVIASFLSSTTLIQAIPGPDIVRFSASWLVAFTPYAFLSLGLAKPALLQAGLVQ-LFRLNRRYRERLVRHEAGHFLTGYLCGMPVESYRADSVTNAVSFFPLETY--------------------------GAYDSDEG------GGITEDDLLRLGVVSLGGVVAETMEFGNSEGGYADLMQLQDLLSLSQKKLSGREQR----------------------DRTRFAA---VMAHTYLTTHRAALRALMDAFLRRESVVQCIRVIEEAG 1099
G LR +NS + + + + + +R V LG N ++RV + + ++ S S+ T + +PGPDIVR+ A+ + P+A++SLGL+ P +L Q LF LNR Y+ERL+RHEAGHFL GYLCG+PV SY NAV F + ++ G +E G + +++L RL VVSL GVV+E + +G +EGG DL QL L +L+ +S REQ F++ + ++ + + AL ALM AF R ESVV C++++E+ G
Sbjct: 130 GFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFNASPAVERVESGVAIVMALSIASALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQFLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSTEIGPPMLPSLPGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNCKEGREGGIXXXXXXXXXXXFHFSSGGVLQSYNMIRQNEKALVALMAAFERGESVVACMQIVEQEG 452 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1156.1 >prot_S-ischiensis_contig1.1156.1 ID=prot_S-ischiensis_contig1.1156.1|Name=mRNA_S-ischiensis_contig1.1156.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=360bp MVRTRAGWGVAAALAVLPLCRGFVPCGLTGTARSRRPSPLVTECTVCADAback to top mRNA from alignment at S-ischiensis_contig1:7834493..7837029- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1156.1 ID=mRNA_S-ischiensis_contig1.1156.1|Name=mRNA_S-ischiensis_contig1.1156.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2537bp|location=Sequence derived from alignment at S-ischiensis_contig1:7834493..7837029- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7834493..7837029- >mRNA_S-ischiensis_contig1.1156.1 ID=mRNA_S-ischiensis_contig1.1156.1|Name=mRNA_S-ischiensis_contig1.1156.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2160bp|location=Sequence derived from alignment at S-ischiensis_contig1:7834493..7837029- (Schizocladia ischiensis KU_0333)back to top |