mRNA_S-ischiensis_contig1.1133.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.1133.1
Unique NamemRNA_S-ischiensis_contig1.1133.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.570e-69
Identity = 150/242 (61.98%), Postives = 194/242 (80.17%), Query Frame = 1
Query:    1 GLSAGSVEDEEEWALKKSEHRITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEELNMIRRMQRQHLGVGRKQKLTPEERAAKRNLDAK 726
            G S  +  +EEE AL++SE +I AEL+DLD+SI LKEALL QI+EG+ASYE+MQ+HYE+KL EMD EV R E E ERLL+ L ++EK++E  VQ+ER+KL +QL++K AAL +A+ +Q ELS LSRDR+ K+ T+  L  EI KMK++K++LQ RLD ++KR RE+L QKS+EI SLKR+A KDQAE+K+L +AK KAEAVSKRHL+EL +IRR+QRQ LGVGRKQKLT +ER  KR LD K
Sbjct:  732 GSSVVTGHEEEERALRQSETKINAELSDLDKSIILKEALLAQIKEGQASYETMQQHYEHKLREMDVEVHRHEQEHERLLSDLAKLEKQTEVAVQSEREKLQKQLKDKTAALAKAKERQSELSVLSRDRRIKQDTMRGLETEILKMKKNKLDLQRRLDSEKKRQREILMQKSKEIMSLKRSAMKDQAEVKRLERAKSKAEAVSKRHLDELALIRRLQRQKLGVGRKQKLTAQERETKRLLDKK 973          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A835YLV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.590e-55
Identity = 135/309 (43.69%), Postives = 197/309 (63.75%), Query Frame = 1
Query:   46 KKSEHRITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEELNMIRRMQRQ----------------------------------------HLGVGRKQKLTPEERAAKRNLDAKIRELTRREEAAERLAAEYEKKLLLLQQKESLELVKTSITSRR 852
            K  E +I  E+ +L+R I +KE LL+ + + +A YE+M++HY  KL EMDEEVRRME++QE L   LH++E++SET + +E  +L   LEEK AAL   + +Q+E+  L+  R + EA +  L +EI +MKR++VELQ RLD ++K+ RE+L  K+ EIT+L+++A +D AE+K+L QAK +AE V+KRHLEEL ++RR+QRQ                                         + +GR + LT EER  KR L+A++RE  RREEAA+RL  EY  KL+LLQQ+E+L+L + S+ SRR
Sbjct:  214 KHREKKIVLEIGELERGIQMKEELLETLRQNQAKYEAMEQHYSRKLAEMDEEVRRMEADQEXLXXXLHDLERRSETALASETQQLRATLEEKAAALEGMKQRQREMGRLAASRTRDEARLKGLDDEISRMKRARVELQKRLDEEKKKQRELLVAKTAEITALRKSARRDAAEIKRLGQAKERAEVVTKRHLEELALLRRLQRQKASTSLTRHVSRPYVVMIDIRFSEDFGSAVNVLSHVTLRAQMAIGRGKPLTAEERGTKRWLEARVREAARREEAADRLQEEYRSKLVLLQQRENLQLARDSLRSRR 522          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A418DWM4_9STRA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DWM4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.060e-12
Identity = 76/263 (28.90%), Postives = 143/263 (54.37%), Query Frame = 1
Query:   70 AELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEELNMI-RRMQRQHLGVGRKQKLTPEERAAKRN---LDAKIRELTRREEAAERLAAEYEKKLLLLQQKESLELVKTSITS 846
            A + DL  +I+LKE +L+ +      YE M+  +E +++EM ++ R   +E+++L A+L +M+ ++         +L  +L+ K   L   R KQ E+      +Q+ +  +  L  EI  MK+ KV+L  ++ GDRK+     +++ REI +LKR   KD+ ++ KL   K   E V KR +EE+    RR+++  L +    K  P +R   ++   L  +I++L+ +++ +E L  E +K+  ++QQ E L  +++ + S
Sbjct:  483 ATVQDLSNNISLKEQMLQTLRRNAEGYERMRGVFEARVIEMADKERSYMAERDQLTAELDKMQHQTSD---PRYQRLSSELQNKDGELGALRKKQAEMKRFETIKQKSDVQLRVLTNEITAMKKQKVDLLKKMQGDRKKYELEASERKREILTLKRAHLKDKQQILKLGSEKNAQERVLKRRVEEVAAANRRLKQXQLLLSANAKKKPLKRFKSKDEEWLADQIQKLSDKQKKSELLEKELDKREKIVQQMERLHGMRSKLQS 742          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A7S1YJV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YJV2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.130e-12
Identity = 62/172 (36.05%), Postives = 101/172 (58.72%), Query Frame = 1
Query:   55 EHRITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRK-------RLREVLNQKSREITSLKRTAAK 549
            + +I A L+DL RSI  KE L+ Q++  +  Y SM+  YENKL EM+ +VR  E E+E L+A+L ++E+ +     ++  ++ ++L +K+  +   R +Q+EL++L+R   + E  +  L EEI  MK+ KV+LQ  +  DRK       RL++   QK RE    KR + K
Sbjct:   15 QQQIEANLSDLSRSIDEKELLINQLQTSQERYASMKEFYENKLAEMEAQVRVQEEEREALVAELAKLEQSN-----SDTKEMNEKLAKKETQIAGLRKRQKELASLTRVSSRNEQQMNRLREEIIAMKQKKVDLQRMVTQDRKLHLKEIQRLKKEAIQKDRETAKWKRVSDK 181          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A397ESB8_9STRA (Kinesin motor domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ESB8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.220e-12
Identity = 76/263 (28.90%), Postives = 143/263 (54.37%), Query Frame = 1
Query:   70 AELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEELNMI-RRMQRQHLGVGRKQKLTPEERAAKRN---LDAKIRELTRREEAAERLAAEYEKKLLLLQQKESLELVKTSITS 846
            A + DL  +I+LKE +L+ +      YE M+  +E +++EM ++ R   +E+++L A+L +M+ ++         +L  +L+ K   L   R KQ E+      +Q+ +  +  L  EI  MK+ KV+L  ++ GDRK+     +++ REI +LKR   KD+ ++ KL   K   E V KR +EE+    RR+++  L +    K  P +R   ++   L  +I++L+ +++ +E L  E +K+  ++QQ E L  +++ + S
Sbjct:  484 ATVQDLSNNISLKEQMLQTLRRNAEGYERMRGVFEARVIEMADKERSYMAERDQLTAELDKMQHQTSD---PRYQRLSSELQNKDGELGALRKKQAEMKRFETIKQKSDVQLRVLTNEITAMKKQKVDLLKKMQGDRKKYELEASERKREILTLKRAHLKDKQQILKLGSEKNAQERVLKRRVEEVAAANRRLKQXQLLLSANAKKKPLKRFKSKDEEWLADQIQKLSDKQKKSELLEKELDKREKIVQQMERLHGMRSKLQS 743          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: W4G6L1_9STRA (Kinesin motor domain-containing protein n=16 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6L1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.240e-12
Identity = 76/263 (28.90%), Postives = 143/263 (54.37%), Query Frame = 1
Query:   70 AELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEELNMI-RRMQRQHLGVGRKQKLTPEERAAKRN---LDAKIRELTRREEAAERLAAEYEKKLLLLQQKESLELVKTSITS 846
            A + DL  +I+LKE +L+ +      YE M+  +E +++EM ++ R   +E+++L A+L +M+ ++         +L  +L+ K   L   R KQ E+      +Q+ +  +  L  EI  MK+ KV+L  ++ GDRK+     +++ REI +LKR   KD+ ++ KL   K   E V KR +EE+    RR+++  L +    K  P +R   ++   L  +I++L+ +++ +E L  E +K+  ++QQ E L  +++ + S
Sbjct:  635 ATVQDLSNNISLKEQMLQTLRRNAEGYERMRGVFEARVIEMADKERSYMAERDQLTAELDKMQHQTSD---PRYQRLSSELQNKDGELGALRKKQAEMKRFETIKQKSDVQLRVLTNEITAMKKQKVDLLKKMQGDRKKYELEASERKREILTLKRAHLKDKQQILKLGSEKNAQERVLKRRVEEVAAANRRLKQXQLLLSANAKKKPLKRFKSKDEEWLADQIQKLSDKQKKSELLEKELDKREKIVQQMERLHGMRSKLQS 894          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A7K4JNI3_GEOCA (KIF4 protein (Fragment) n=2 Tax=Cuculiformes TaxID=8940 RepID=A0A7K4JNI3_GEOCA)

HSP 1 Score: 67.8 bits (164), Expect = 1.000e-8
Identity = 56/188 (29.79%), Postives = 107/188 (56.91%), Query Frame = 1
Query:   61 RITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEE 624
            +++ EL +L++++TLKEAL K++ +  +  E +Q  Y+  + +++ EV  ++ E+E L A LH  +K +     +ER +  ++L+E +A ++  + K  E S L + ++  E TV  L ++I +MK  +V+L  ++  D ++ R+   QK +E+  LK    K Q E+ K+ +   K   V +R  EE
Sbjct:  483 QLSKELLELNKALTLKEALAKKMTQNDSQLEPIQSQYQTSIKDLELEVSNLQKEKEELEAALHMAKKDANQAKLSERRR--KRLQELEAQISELKKKLTEQSKLLKLKESTERTVCKLNQDIREMKNQRVQLMRQMKEDAEKFRQWKQQKDKEVIQLKERDRKRQYELIKIERDFQKQANVLRRKTEE 668          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A6J1J2S0_CUCMA (kinesin-like protein KIN-4C isoform X1 n=5 Tax=Cucurbita TaxID=3660 RepID=A0A6J1J2S0_CUCMA)

HSP 1 Score: 66.2 bits (160), Expect = 3.230e-8
Identity = 55/207 (26.57%), Postives = 109/207 (52.66%), Query Frame = 1
Query:    4 LSAGSVEDEEEWALKKSEHRITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEE 624
            +S G  + E+E      + R+  EL +LD+ +  KEA +K+      S   +++HYE K+ E+++E R ++ E E L   L  +   S+   Q  + + +Q+L   +  ++  + KQ   + + R +Q+ +     L++EIH++K  KV+LQH++  + ++ R     + +E+  LK+   +++ EM KL     + + V +R  EE
Sbjct:  542 ISDGIEDHEKEIEHSTMQERLDRELKELDKKLEQKEAEMKRFSGADTSV--LKQHYERKVHELEQEKRALQKEIEVLKCNLSSISSTSDDGAQKLKQEYLQKLNFLETQVSELKKKQDAQAQILRQKQKSDEAAKRLLDEIHRIKSHKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEE 746          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A8C3JNW6_9CHAR (Kinesin family member 4A n=1 Tax=Calidris pygmaea TaxID=425635 RepID=A0A8C3JNW6_9CHAR)

HSP 1 Score: 63.9 bits (154), Expect = 1.790e-7
Identity = 56/188 (29.79%), Postives = 102/188 (54.26%), Query Frame = 1
Query:   61 RITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEE 624
            +++ EL +L++++TLKEAL K++ +  +  E +Q  Y+  + E++ EV  ++ E+E L   LH  +K       +ER +  ++L+E +  +   + K  E S L + ++  E TV  L +EI +MK  +V+L  ++  D ++ R+   QK +E+  L     K Q E+ KL +   K   V +R  EE
Sbjct:  513 QMSKELLELNKALTLKEALAKKMTQNDSQLEPIQSQYQANIKELELEVSNLQKEKEELTLALHMAKKDVNQAKLSERRR--KRLQELEGQINELKKKLNEQSKLLKLKESTEHTVIKLNQEIREMKNQRVQLMRQMKDDAEKFRQWKQQKDKEVIQLXERDRKRQYELLKLERDFQKQANVLRRKTEE 698          
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Match: A0A8C5IF20_JUNHY (Kinesin family member 4A n=4 Tax=Junco hyemalis TaxID=40217 RepID=A0A8C5IF20_JUNHY)

HSP 1 Score: 63.5 bits (153), Expect = 2.380e-7
Identity = 56/188 (29.79%), Postives = 104/188 (55.32%), Query Frame = 1
Query:   61 RITAELTDLDRSITLKEALLKQIEEGKASYESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKLVQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKVELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEAVSKRHLEE 624
            +++ EL +L++++TLKEAL K++ +       +Q  Y+  + +++ EV  ++ E+E L+  L   +K       +ER +  ++L+E +A +T    K  E S L + ++  E TV+ L +EI +MK+ +V+L  ++  D ++ R+   QK +E+  LK    K Q E+ KL +   K   V +R  EE
Sbjct:  501 QLSRELLELNKALTLKEALAKKMSQNDTQLGPIQSQYQTNIRDLELEVSNLQKEKEELILALQMAKKDINQAKLSERRR--KRLQELEAQITEXXXKLNEQSKLLKLKESTEHTVSKLNQEIREMKQQRVQLMRQMKEDTEKFRQWKLQKDKEVIQLKEKDRKRQYELLKLERDFQKQANVLRRKTEE 686          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KW93_9PHAE1.570e-6961.98Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A835YLV6_9STRA1.590e-5543.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A418DWM4_9STRA1.060e-1228.90Kinesin motor domain-containing protein (Fragment)... [more]
A0A7S1YJV2_9STRA1.130e-1236.05Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A397ESB8_9STRA1.220e-1228.90Kinesin motor domain-containing protein (Fragment)... [more]
W4G6L1_9STRA1.240e-1228.90Kinesin motor domain-containing protein n=16 Tax=A... [more]
A0A7K4JNI3_GEOCA1.000e-829.79KIF4 protein (Fragment) n=2 Tax=Cuculiformes TaxID... [more]
A0A6J1J2S0_CUCMA3.230e-826.57kinesin-like protein KIN-4C isoform X1 n=5 Tax=Cuc... [more]
A0A8C3JNW6_9CHAR1.790e-729.79Kinesin family member 4A n=1 Tax=Calidris pygmaea ... [more]
A0A8C5IF20_JUNHY2.380e-729.79Kinesin family member 4A n=4 Tax=Junco hyemalis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7734082..7737834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.2
Seed ortholog evalue2.4e-16
Seed eggNOG ortholog65071.PYU1_T014623
KEGG koko:K10395
EggNOG free text desc.kinesin. Source PGD
EggNOG OGs1MF6D@121069,COG5059@1,KOG0244@2759
COG Functional cat.Z
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-01_000540.1
Exons5
Model size1000
Cds size996
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1133.1prot_S-ischiensis_contig1.1133.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 7734082..7737832 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815485.353142-CDS-S-ischiensis_contig1:7734081..77342461622815485.353142-CDS-S-ischiensis_contig1:7734081..7734246Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7734082..7734246 +
1695739728.6354063-CDS-S-ischiensis_contig1:7734081..77342461695739728.6354063-CDS-S-ischiensis_contig1:7734081..7734246Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7734082..7734246 +
1622815485.3630006-CDS-S-ischiensis_contig1:7734830..77349471622815485.3630006-CDS-S-ischiensis_contig1:7734830..7734947Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7734831..7734947 +
1695739728.646376-CDS-S-ischiensis_contig1:7734830..77349471695739728.646376-CDS-S-ischiensis_contig1:7734830..7734947Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7734831..7734947 +
1622815485.3742666-CDS-S-ischiensis_contig1:7736399..77365641622815485.3742666-CDS-S-ischiensis_contig1:7736399..7736564Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7736400..7736564 +
1695739728.656448-CDS-S-ischiensis_contig1:7736399..77365641695739728.656448-CDS-S-ischiensis_contig1:7736399..7736564Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7736400..7736564 +
1622815485.3846226-CDS-S-ischiensis_contig1:7737074..77371751622815485.3846226-CDS-S-ischiensis_contig1:7737074..7737175Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7737075..7737175 +
1695739728.666792-CDS-S-ischiensis_contig1:7737074..77371751695739728.666792-CDS-S-ischiensis_contig1:7737074..7737175Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7737075..7737175 +
1622815485.3947315-CDS-S-ischiensis_contig1:7737384..77378321622815485.3947315-CDS-S-ischiensis_contig1:7737384..7737832Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7737385..7737832 +
1695739728.6858683-CDS-S-ischiensis_contig1:7737384..77378321695739728.6858683-CDS-S-ischiensis_contig1:7737384..7737832Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7737385..7737832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.1133.1

>prot_S-ischiensis_contig1.1133.1 ID=prot_S-ischiensis_contig1.1133.1|Name=mRNA_S-ischiensis_contig1.1133.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=332bp
GLSAGSVEDEEEWALKKSEHRITAELTDLDRSITLKEALLKQIEEGKASY
ESMQRHYENKLVEMDEEVRRMESEQERLLAQLHEMEKKSETIVQAERDKL
VQQLEEKKAALTRARGKQQELSALSRDRQQKEATVTALMEEIHKMKRSKV
ELQHRLDGDRKRLREVLNQKSREITSLKRTAAKDQAEMKKLAQAKGKAEA
VSKRHLEELNMIRRMQRQHLGVGRKQKLTPEERAAKRNLDAKIRELTRRE
EAAERLAAEYEKKLLLLQQKESLELVKTSITSRRDKCQVGDASSSPPPAA
APAQRGAAAAASRTRTAAATSAGGGARGGAGA
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mRNA from alignment at S-ischiensis_contig1:7734082..7737834+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.1133.1 ID=mRNA_S-ischiensis_contig1.1133.1|Name=mRNA_S-ischiensis_contig1.1133.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3753bp|location=Sequence derived from alignment at S-ischiensis_contig1:7734082..7737834+ (Schizocladia ischiensis KU_0333)
GGCCTGTCAGCGGGGTCGGTGGAGGATGAGGAGGAGTGGGCACTCAAGAA GAGCGAGCACCGCATTACGGCGGAGCTGACGGACCTGGACCGCAGCATCA CGCTCAAGGAGGCCCTGCTGAAGCAGATCGAGGAGGGGAAGGCGTCCTAC GAGTCCATGCAGCGGGTGAGTGACAGAGGTGCCGGGCTCGGGAGAGGGGC ATCTCGAGTTTTGTTGGGGTGCAAACTGGGTCATGCCGGTTCACTGGCAC AGCTCGTTGACAGCCAGTGTTGGGTTGGCAGCCCCCAGGAAACATTCACC ATATGGAACTTGTGCAGCTTTGCTAGAAAAACTGTAAACGCTGGCCTCCC CCTGCTCAACCGAGGCCGGGCATGGGCATCAAAGACCTGTCTGCGTGCAT GCACGCCAACAGGACCGCAAACATGCAACGCAGCAGTCCTCCTCATCGGC GTCATGCTTCTTCTCATCTGCCTCCTCCTCCTCCTTCCGCTCCCCACCCG CCCCCCGCTCCACCGCCGCCACTCCTCCCCTGTCCATCCCGCCCTTCTCC CCCCCAACCTTCCCCTACCTCCCCCTCCTCCTGCCCGCCCTCTTCCCGGC CCCTCCCCCCCCTTTCCCTCGTCCCCCGTTGCAACGACTTTGTTTGTGTC CCCCCCCCCCTGCCGTGGACTGCCCTGCCCGCTTGGGGCGTGGGCCGGGG GCTGGGCTGATGGCGGTGGGGTGGGGTGGGGTGGGGTGTATCTGAGCAGC ACTACGAGAACAAGCTGGTGGAAATGGACGAGGAGGTGCGGCGGATGGAG TCAGAGCAGGAGCGCCTGCTGGCCCAGCTCCACGAAATGGAGAAGAAGAG CGAGACCATCGTTCAGGTGAGGGTCGGAACTGTTGCTGCCGCACTCGACT TCCAGCATACGTATTGGCCTTGTCATTCCTGCAGCACTGTTTTTGGTGCG TTGCTGCGTGGTCGAAATGGTCTGGCGACTATGGCATGCGCAAGGCGAGG ACATGCAGCTGGGGGCTGGCCAGCGGTCCAGCAAGTAGTAGTGGGCCGAC GGTCGGTGGCATGCACAGACAGGGTGTCCCCTGTCCAACGTGAGTAGCTC TACACACACACACACACACACACATACGAAGCTATGCTGTCCGAGGGGGT ATCAGGTTGGAAACCCTGCAATTCCCTAGGGATTCTAAGAAACTGCTGTG GGAGTATGATCTATCCCATAAGGTGGAACCTATCACTTCCGGGATGGGCG TTGATTGGGCGATACTTTCGAACGAAAGCGAATTGCGCGGCGTGCGACGG CTCGTTGTACTCGAGTAGAGCCCTACGTTATTGCTTAGTAACATTTTTCC ATTCGGGCATCATGTGGCAAGATATCGGCCGGGTTGGCCTGGACTGGCCG TTGACGGCTAATTTCAGTACTGAAACCAAGTATGTAGTCTAAAATTTTTG AGATTGTTTTTTTGAAAAGCGCAATCGACTCGTCTCATCGAGAGGAATCA CACGGTGGTTTCGATTTTCGCCAATTCGTCGTCGTTCGCTCCCAAATGAG CGTAGCCTATGTCGCCTGATTTAGCCAATGAAATGGTCTACCCGAAGAGT AGGTCGGCTTATTGATTGCGAATCTCGGGACGACCAACGAATCAGACTTC ACCGAATGGCGCGATGGAAAATCCGGGTCGACAGCTCCACATTGGGCCAA TCGGAAGCTTCCCTCTCAGTGATGGTTCCGAGATATTGGCCGACAAGCCC GATGGAGTGAAAATCAGCCAGTTGCCCCGACGGCTTCCCAGATGCGTTTC GCAACGCAACGCAACCGGGGAAGGATTTTTGTACACCAATCGGCAGCTCT CGATCACAGAGCTTTCGATCGCGCTATCGCGCGAGGTCTGAAACAGTGGT CGTCCCAAGATATTAATCGATACGTGCTGTGGTCCCGTAAGTGATAGGTT CCACCTTATGGGAAACGCGAGGCTGCCAGCCCAGGTGGAGAGGGCTGTAT GGCCATCGGCATAACTGCAGAAACTTGTTCGAGTACAAGTACTCAGATTG TGGCCGAGGCCGGGCGTGCCCGTCCATCTCATCCGCCTCTGCCAGCAGCC CAGCCTGGCCAGGCCCCTGCCAGTGCTGCGCCGCCGTCCGTGGTTGCAAG CGCAAGCCCGCGGTGCAGCCTTGGGGCTCCTTCCTCGCGCACACACACGC ACACACGCACATGCTCGCCCGCCTGTCTGTCTGTGGCGTCCGCTTGCTCA CCCACTTCGCCTTCGCCTGTCCATGTGTCCGTCCGTCTGTCCCAACCCCC CCGCCCTGCCTGGGGCAGGCGGAGCGCGACAAGCTGGTTCAGCAATTGGA GGAGAAGAAGGCGGCGCTCACCCGGGCTCGGGGGAAGCAGCAGGAGCTCT CGGCCCTATCACGGGACCGGCAGCAGAAGGAGGCCACCGTGACCGCCCTC ATGGAGGAGATCCACAAGATGAAACGAAGCAAGGTAAGGGATGCGTGGGA GGGGCAGGGGGGGCAGGAGGGCAGGAGGAGATCGGGGCAAGGGGGGCTGG GAGGGGGGTACGTGGAGGGGACCGGGTCGGGGGGGTTGGGTGGGGGTGGG GGTAGGGGCATGGGGGGGGGAAAGGCTTGAGAGCCAGGAGGGCAGGTGGA GGAGGGCAGAGGGGGCGGCCAGAGGTGTGCATGCATTCCGGGCAGCTTGT TTTTCTGTACGCGGGTACAGAAGAAGAACAAAAAGAAGAAGAGAGCCTGC CGGGCCAGATGTCTGACTGTGTTGTCTCACGAGCCCCTGGAAGCCCCCAC GCCCCCACCACCACGGCCGGGACCCGGTGGCATGGTCATGTCTCCATTGC ATACGGTAGCCTTCATCACCCCGGCCGGTAGCCCCACTACTGACTAATTT TCTGATTGTGTTTCATAGTACTTGTGTTTTGTGGATAACTGGGTGTAAAG GCGTGCTTCGTCCCCCGTCTGGCCCCTCCTCCACCGCCACCAGGTGGAGC TGCAGCATCGCTTGGACGGGGACCGCAAGCGCCTTCGGGAAGTGCTCAAC CAGAAGTCCCGGGAGATCACCAGCCTCAAGCGCACCGCCGCCAAGTGGGT GTCCTGTCCTGTTCTTTGCGGGTGCTGAGCTGAGACCCTCCTCACGCCCC CAAACGCCTGTGCAAAGTGTAGTCAACGACTTGGGATCAAAGAAAAAGCC ACGTACGTCTAGCAGCTACTCTGTGTGAACATGGGTGCTCTCCCGCCCCT CCCTCCTCCCCCCGGTCCTTGCCCCTCCCGCAACATCCGCGAAACACCTT CAGGGACCAAGCGGAGATGAAGAAGCTAGCCCAGGCAAAGGGCAAGGCCG AGGCTGTCTCCAAGCGCCACCTGGAGGAGCTCAACATGATCCGACGGATG CAGCGCCAGCACCTGGGCGTGGGGCGCAAGCAGAAGCTCACCCCCGAGGA GCGCGCCGCCAAGCGAAACCTGGACGCCAAGATCCGCGAGCTCACCCGCC GCGAGGAGGCCGCCGAACGCCTGGCCGCCGAGTACGAGAAGAAGCTCCTC CTCCTGCAGCAGAAGGAGAGCCTCGAGCTGGTCAAGACCTCCATCACCAG CCGCCGTGACAAGTGCCAGGTTGGGGATGCCTCCTCCTCCCCGCCGCCCG CGGCGGCGCCGGCACAGCGCGGCGCCGCCGCTGCAGCCTCACGGACCAGG ACAGCTGCAGCCACATCCGCTGGGGGAGGAGCCCGTGGTGGGGCCGGGGC CGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig1:7734082..7737834+

>mRNA_S-ischiensis_contig1.1133.1 ID=mRNA_S-ischiensis_contig1.1133.1|Name=mRNA_S-ischiensis_contig1.1133.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1992bp|location=Sequence derived from alignment at S-ischiensis_contig1:7734082..7737834+ (Schizocladia ischiensis KU_0333)
GGCCTGTCAGCGGGGTCGGTGGAGGATGAGGAGGAGTGGGCACTCAAGAA
GAGCGAGCACCGCATTACGGCGGAGCTGACGGACCTGGACCGCAGCATCA
CGCTCAAGGAGGCCCTGCTGAAGCAGATCGAGGAGGGGAAGGCGTCCTAC
GAGTCCATGCAGCGGGGCCTGTCAGCGGGGTCGGTGGAGGATGAGGAGGA
GTGGGCACTCAAGAAGAGCGAGCACCGCATTACGGCGGAGCTGACGGACC
TGGACCGCAGCATCACGCTCAAGGAGGCCCTGCTGAAGCAGATCGAGGAG
GGGAAGGCGTCCTACGAGTCCATGCAGCGGCACTACGAGAACAAGCTGGT
GGAAATGGACGAGGAGGTGCGGCGGATGGAGTCAGAGCAGGAGCGCCTGC
TGGCCCAGCTCCACGAAATGGAGAAGAAGAGCGAGACCATCGTTCAGCAC
TACGAGAACAAGCTGGTGGAAATGGACGAGGAGGTGCGGCGGATGGAGTC
AGAGCAGGAGCGCCTGCTGGCCCAGCTCCACGAAATGGAGAAGAAGAGCG
AGACCATCGTTCAGGCGGAGCGCGACAAGCTGGTTCAGCAATTGGAGGAG
AAGAAGGCGGCGCTCACCCGGGCTCGGGGGAAGCAGCAGGAGCTCTCGGC
CCTATCACGGGACCGGCAGCAGAAGGAGGCCACCGTGACCGCCCTCATGG
AGGAGATCCACAAGATGAAACGAAGCAAGGCGGAGCGCGACAAGCTGGTT
CAGCAATTGGAGGAGAAGAAGGCGGCGCTCACCCGGGCTCGGGGGAAGCA
GCAGGAGCTCTCGGCCCTATCACGGGACCGGCAGCAGAAGGAGGCCACCG
TGACCGCCCTCATGGAGGAGATCCACAAGATGAAACGAAGCAAGGTGGAG
CTGCAGCATCGCTTGGACGGGGACCGCAAGCGCCTTCGGGAAGTGCTCAA
CCAGAAGTCCCGGGAGATCACCAGCCTCAAGCGCACCGCCGCCAAGTGGA
GCTGCAGCATCGCTTGGACGGGGACCGCAAGCGCCTTCGGGAAGTGCTCA
ACCAGAAGTCCCGGGAGATCACCAGCCTCAAGCGCACCGCCGCCAAGGAC
CAAGCGGAGATGAAGAAGCTAGCCCAGGCAAAGGGCAAGGCCGAGGCTGT
CTCCAAGCGCCACCTGGAGGAGCTCAACATGATCCGACGGATGCAGCGCC
AGCACCTGGGCGTGGGGCGCAAGCAGAAGCTCACCCCCGAGGAGCGCGCC
GCCAAGCGAAACCTGGACGCCAAGATCCGCGAGCTCACCCGCCGCGAGGA
GGCCGCCGAACGCCTGGCCGCCGAGTACGAGAAGAAGCTCCTCCTCCTGC
AGCAGAAGGAGAGCCTCGAGCTGGTCAAGACCTCCATCACCAGCCGCCGT
GACAAGTGCCAGGTTGGGGATGCCTCCTCCTCCCCGCCGCCCGCGGCGGC
GCCGGCACAGCGCGGCGCCGCCGCTGCAGCCTCACGGACCAGGACAGCTG
CAGCCACATCCGCTGGGGGAGGAGCCCGTGGTGGGGCCGGGGCCGGACCA
AGCGGAGATGAAGAAGCTAGCCCAGGCAAAGGGCAAGGCCGAGGCTGTCT
CCAAGCGCCACCTGGAGGAGCTCAACATGATCCGACGGATGCAGCGCCAG
CACCTGGGCGTGGGGCGCAAGCAGAAGCTCACCCCCGAGGAGCGCGCCGC
CAAGCGAAACCTGGACGCCAAGATCCGCGAGCTCACCCGCCGCGAGGAGG
CCGCCGAACGCCTGGCCGCCGAGTACGAGAAGAAGCTCCTCCTCCTGCAG
CAGAAGGAGAGCCTCGAGCTGGTCAAGACCTCCATCACCAGCCGCCGTGA
CAAGTGCCAGGTTGGGGATGCCTCCTCCTCCCCGCCGCCCGCGGCGGCGC
CGGCACAGCGCGGCGCCGCCGCTGCAGCCTCACGGACCAGGACAGCTGCA
GCCACATCCGCTGGGGGAGGAGCCCGTGGTGGGGCCGGGGCC
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