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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1158 |
| Cds size | 714 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815360.4464-CDS-S-ischiensis_contig1:7698686..7699042 | 1622815360.4464-CDS-S-ischiensis_contig1:7698686..7699042 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7698687..7699042 - |
| 1695739659.5659418-CDS-S-ischiensis_contig1:7698686..7699042 | 1695739659.5659418-CDS-S-ischiensis_contig1:7698686..7699042 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7698687..7699042 - |
| 1622815360.4937844-CDS-S-ischiensis_contig1:7699553..7699632 | 1622815360.4937844-CDS-S-ischiensis_contig1:7699553..7699632 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7699554..7699632 - |
| 1695739659.5746033-CDS-S-ischiensis_contig1:7699553..7699632 | 1695739659.5746033-CDS-S-ischiensis_contig1:7699553..7699632 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7699554..7699632 - |
| 1622815360.5104728-CDS-S-ischiensis_contig1:7700314..7700593 | 1622815360.5104728-CDS-S-ischiensis_contig1:7700314..7700593 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7700315..7700593 - |
| 1695739659.5870261-CDS-S-ischiensis_contig1:7700314..7700593 | 1695739659.5870261-CDS-S-ischiensis_contig1:7700314..7700593 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7700315..7700593 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815360.524034-UTR-S-ischiensis_contig1:7700593..7701037 | 1622815360.524034-UTR-S-ischiensis_contig1:7700593..7701037 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7700594..7701037 - |
| 1695739659.597717-UTR-S-ischiensis_contig1:7700593..7701037 | 1695739659.597717-UTR-S-ischiensis_contig1:7700593..7701037 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7700594..7701037 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1130.1 >prot_S-ischiensis_contig1.1130.1 ID=prot_S-ischiensis_contig1.1130.1|Name=mRNA_S-ischiensis_contig1.1130.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=238bp
MTATASRTCGSVSPVGRGAGSPPFGLLPPSPVESSPAVRAPLSYHGGPEQ
KKRLSGGSTGGGSQGHEGDGGGGNSNGQARTPWRRSRRRTMGEVASQLRR
DSSLERTRAAQASASETSDASARSAPGSGGSAWQVRLESALASTVARLPR
RVGRRERSSSFGGSGGNSPRGQPDSPRSCPGDGHGGGGGSGEPRSPTGAG
APAPGGRSSPRMPRRQRGTGDWFGLGNFIGGGSGGGEV back to topmRNA from alignment at S-ischiensis_contig1:7698687..7701037- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1130.1 ID=mRNA_S-ischiensis_contig1.1130.1|Name=mRNA_S-ischiensis_contig1.1130.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2351bp|location=Sequence derived from alignment at S-ischiensis_contig1:7698687..7701037- (Schizocladia ischiensis KU_0333)
TCCCTCTTGTCAGCCCCCCCCCGAGCCCAAAGCCCCTCCCCATCAACTCC
GCTGCTCACATACTTCAAAATACTCGCAAGTACTTCCTTCTAAGTACTCA
TGAAGCCACTCAATGCACTAGTAACACTTCCTCGGAAGATGTGAGTGGCC
AATGGTCTCTTGGCTAAGGCAAGCCCTGTACTCGTACAGTATGTACTTCG
AAGTATGTGCGTCAAGTACAAAGTACTGCGTTGTGCTTGCCGTAGTCCAC
GCGAATACTTGAGTGCTCAAACACATGTCCCACCTAGAGTACAATACAGT
AGTACTTCGAAGTGGTGGCAAACATGTACTTCAAAGTCCTCCTCCTCCTT
CTCCTCCTCCTCCTCCTCCTCCAAGTAGCTCAATGCGAAATGCCATTCTT
TGCACGCGGCAGGCACATGGGCGGGGCGGGGCAGTAAGTCTCCGATGACC
GCAACAGCAAGCCGGACCTGCGGCAGCGTGTCCCCTGTGGGGAGGGGGGC
AGGGTCGCCACCTTTTGGCCTCCTCCCACCGAGCCCAGTAGAGAGCTCCC
CTGCTGTGCGAGCACCCCTGTCCTACCATGGCGGCCCTGAGCAGAAGAAG
CGCCTAAGCGGCGGCAGCACTGGAGGTGGTAGCCAAGGCCACGAAGGCGA
CGGCGGTGGTGGCAACAGCAACGGTCAGGCACGAACGCCTTGGCGGCGGT
CGAGACGGCGAACCATGGGCGAGGTGAGTGAGTGGGCAATTCAGCACGAG
AGACGGTGAGCTCTGTGTGTGTGTGTGTGTGTGTGTGCACGTGCCTGCGT
GCGTGCGTGCGCACACCATGGTTGCTGTGGCCCAGAGAAAATTGTACACG
CTCCTAGACCGAGACGGACCAGGCCCCCTCCCGCCCTTGACAGGGCCTTA
TTAAGATATCTTAGTCGTATATATATATATGTGCGTGTGTATGTGTGTGT
GCTCACGTTGTGCTTGTCGTAATCCGGAGACAATTGACCACGCACCTCGA
CCTTGTTCCGGTGTTGACTGTGCAGCACAGTGGTGGAGCCTCTGCTCTCT
TCGGCATGTAGCGGGGGCCCGCCGAGATTTGCCGAACCCCACTGATTCAT
GCTCCGTACTACTGGTTGTCCTCCCCTGGCGAGCTCAGGAAGGTGTTTAC
CACTGTTGAGGAAGGTGGTTACCACTGTTGAGGTCTTTAGCGACATGGCC
TGCACCTTGCCGTGTTGTTCCTTTCACCCTTGTTCTTGATACTCTACAAT
GCAGGACTGACTCTTCAAAGTATTTGGTGTAGGGTGTGTGTGGAGCAAGT
CACGGGAGGTTGACCCCGGGAAGGCGTGCGCACCTCCACTGTACCTCAAA
AGCTCAACAGACCCCCCCGGCCCGCGACATCTCACACGGGAACCGAACGC
GCAAGGTGGCCTCCCAGCTGAGGCGCGATTCGAGTCTGGAGAGGACGCGG
GCGGCCCAGGCCTCCGCATCCGAGACCTCAGATGGTGAGGGAGGGCACAG
CGCAAGTGCGCATGCACCTGAAGCACCTGCCACTACGTGCTTTGGAAGTA
CTCAATTGTGTTCGAGTACAGTAGTAGTGCTTGTACTCGTGCTTCAAGAG
TACTTTGCAGTATGTGTTCGGGAGTGCAGCAGTGGACTCTCTCTTCAAGC
CTTGCCCCTGCCAGCAGATGATGAGGATGCTGTGGCGACAAAGCACGGCA
GCTGGTCGGGCCTGGGCCCCCTTCTGTGCTCCTCCCGCGGCCAGTTGCGC
CCGCCTACAAAGGCAGTTTGGCACGTCAGTGGGCTGGCTGGTCTGCGCCC
TTAGGGGCGATGGCAAGGGACAGCACACTTCCACCAAACACATCGCACAA
CATACACACACATACTACATGTAGCCCAACAGCGTGCCGGCTAATGAGTG
CTGCCTGTTCCTTCCCTGCGTGCACCCCTCCCTCACTTCATCCCTCCCCT
CGCCCCCCCCCGTGCGACTGCTGCGCAATGCAAAACCAACACCAGCCTCC
GCCAGGAGTGCCCCCGGGAGTGGGGGCAGCGCCTGGCAAGTCCGCTTGGA
GAGCGCCTTGGCCAGCACAGTCGCCCGCCTACCCCGGCGCGTGGGCCGCC
GAGAGCGGAGCAGCAGTTTCGGGGGCAGTGGCGGCAATTCTCCCCGGGGC
CAGCCTGACTCTCCGCGTTCCTGCCCCGGCGATGGCCATGGCGGTGGCGG
CGGAAGCGGCGAGCCTCGCAGCCCGACGGGCGCAGGTGCGCCCGCGCCTG
GTGGGCGCTCGTCCCCTCGGATGCCGCGGCGGCAGCGGGGGACCGGGGAC
TGGTTCGGGCTGGGCAATTTTATCGGCGGCGGCAGCGGTGGCGGAGAGGT
C back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7698687..7701037- >mRNA_S-ischiensis_contig1.1130.1 ID=mRNA_S-ischiensis_contig1.1130.1|Name=mRNA_S-ischiensis_contig1.1130.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1428bp|location=Sequence derived from alignment at S-ischiensis_contig1:7698687..7701037- (Schizocladia ischiensis KU_0333)
ATGACCGCAACAGCAAGCCGGACCTGCGGCAGCGTGTCCCCTGTGGGGAG
GGGGGCAGGGTCGCCACCTTTTGGCCTCCTCCCACCGAGCCCAGTAGAGA
GCTCCCCTGCTGTGCGAGCACCCCTGTCCTACCATGGCGGCCCTGAGCAG
AAGAAGCGCCTAAGCGGCGGCAGCACTGGAGGTGGTAGCCAAGGCCACGA
AGGCGACGGCGGTGGTGGCAACAGCAACGGTCAGGCACGAACGCCTTGGC
GGCGGTCGAGACGGCGAACCATGGGCGAGATGACCGCAACAGCAAGCCGG
ACCTGCGGCAGCGTGTCCCCTGTGGGGAGGGGGGCAGGGTCGCCACCTTT
TGGCCTCCTCCCACCGAGCCCAGTAGAGAGCTCCCCTGCTGTGCGAGCAC
CCCTGTCCTACCATGGCGGCCCTGAGCAGAAGAAGCGCCTAAGCGGCGGC
AGCACTGGAGGTGGTAGCCAAGGCCACGAAGGCGACGGCGGTGGTGGCAA
CAGCAACGGTCAGGCACGAACGCCTTGGCGGCGGTCGAGACGGCGAACCA
TGGGCGAGGTGGCCTCCCAGCTGAGGCGCGATTCGAGTCTGGAGAGGACG
CGGGCGGCCCAGGCCTCCGCATCCGAGACCTCAGATGGTGGCCTCCCAGC
TGAGGCGCGATTCGAGTCTGGAGAGGACGCGGGCGGCCCAGGCCTCCGCA
TCCGAGACCTCAGATGCCTCCGCCAGGAGTGCCCCCGGGAGTGGGGGCAG
CGCCTGGCAAGTCCGCTTGGAGAGCGCCTTGGCCAGCACAGTCGCCCGCC
TACCCCGGCGCGTGGGCCGCCGAGAGCGGAGCAGCAGTTTCGGGGGCAGT
GGCGGCAATTCTCCCCGGGGCCAGCCTGACTCTCCGCGTTCCTGCCCCGG
CGATGGCCATGGCGGTGGCGGCGGAAGCGGCGAGCCTCGCAGCCCGACGG
GCGCAGGTGCGCCCGCGCCTGGTGGGCGCTCGTCCCCTCGGATGCCGCGG
CGGCAGCGGGGGACCGGGGACTGGTTCGGGCTGGGCAATTTTATCGGCGG
CGGCAGCGGTGGCGGAGAGGTCCCTCCGCCAGGAGTGCCCCCGGGAGTGG
GGGCAGCGCCTGGCAAGTCCGCTTGGAGAGCGCCTTGGCCAGCACAGTCG
CCCGCCTACCCCGGCGCGTGGGCCGCCGAGAGCGGAGCAGCAGTTTCGGG
GGCAGTGGCGGCAATTCTCCCCGGGGCCAGCCTGACTCTCCGCGTTCCTG
CCCCGGCGATGGCCATGGCGGTGGCGGCGGAAGCGGCGAGCCTCGCAGCC
CGACGGGCGCAGGTGCGCCCGCGCCTGGTGGGCGCTCGTCCCCTCGGATG
CCGCGGCGGCAGCGGGGGACCGGGGACTGGTTCGGGCTGGGCAATTTTAT
CGGCGGCGGCAGCGGTGGCGGAGAGGTC back to top
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