mRNA_S-ischiensis_contig1.1124.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI) HSP 1 Score: 187 bits (476), Expect = 7.440e-50 Identity = 125/332 (37.65%), Postives = 157/332 (47.29%), Query Frame = 2
Query: 353 SSFSWLQRPSPRFVERFLARLSAEAPPTNHPYAGITDIATCRGWDPAPVRKRSSFTLRTIRWARPKRERKPVCSTWVHSPTTVA*NQ*STQAAHAHCRVCLGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAG-QPVRQEARHLATFARACGGLAWCVNPCQIMYERVDRPL--IRSPAPDQQ-----------------------AEWPTWDPVFEPIPA-FWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRAIV 1267
++F++ + PS V R+L R E P NH +AG +DIA F RT+R AH LG G+ Y GR+ALL W+MHEGS WA I L Q +P Q R+L T A+AC GL WC+NPCQ++YER D L I P D A W P P A F PG G+QSAVAYAT GHLI+GEERMRV+ F GG+DS VWFEVYS+SRG+G +G L+FP ++ MQ RFFREQA+T++ +V
Sbjct: 22 TTFTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVR---------------------------------AH----LGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQ--RNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPVENTKRVMGGGGGALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDS-----------------------VWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVV 291
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: W7TBY2_9STRA (DUF1990 domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBY2_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.190e-23 Identity = 82/210 (39.05%), Postives = 106/210 (50.48%), Query Frame = 2
Query: 647 VCLGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAGQPVRQEARH---LATFARACGGLAWCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRAIV 1267
VCLG G+ Y R+AL W+MH SP GIV + G + T AR GG AW +NPC + YE D+ R+ + P W SAVAY T+ HLI GEERMRV+W+ +G XXXXXXXXX VWFE+ S++RG+G +GRLLFP + MQ FF+EQ ++ +V
Sbjct: 146 VCLGRGQKTYAKAREALRGWKMHARSPTTGIVRGREGXXXXXXXXXXVGVVTLARVYGGGAWVMNPCCVAYESFDK-QDRNGEGEGGRXXXXXXXXXXGGPRVW---------SAVAYTTVGRHLIAGEERMRVIWYPRG--------------RXXXXXXXXXGEDEVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQEQLRGMQFMV 331
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: A0A7S4NRR5_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NRR5_GUITH) HSP 1 Score: 99.0 bits (245), Expect = 5.640e-20 Identity = 68/188 (36.17%), Postives = 92/188 (48.94%), Query Frame = 2
Query: 650 CLGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAGQPVRQEARHLATFARACGGLAWCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMR 1213
C+G GR AYE R L WR+ + WAG+ L A + +E+ + T+A+ GGL W NPC+ +YE VD PL + A D D F + + S + S VAY+TL+GHLI GEER+ V+W D V+F + S+S GSG +G LLFP MR
Sbjct: 38 CVGRGREAYERARALLTRWRVMDNVAWAGV-LSPAKKNEEKESP-VVTYAKCYGGLMWVRNPCRQVYEDVDVPL-KHRARDA-------DCFFNQL-------SPSARLSQVAYSTLQGHLIRGEERLAVLWDGYEPSKDPSSSELGR----------------VYFAIRSVSAGSGLVGSLLFPFMR 192
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: R1E3Q5_EMIHU (DUF1990 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E3Q5_EMIHU) HSP 1 Score: 96.7 bits (239), Expect = 1.070e-18 Identity = 64/205 (31.22%), Postives = 88/205 (42.93%), Query Frame = 2
Query: 644 RVCLGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAGQPVRQEARHLATFARACGGLAWCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLR 1258
RV LG GR + R LL+W MHEGS W+ ++++ P + LA L W NPC+ + RV R ++ +V Y+TL GHL+EGEE+M V+W ++ V FEV S SRG+GPLG+LLFP + Q RFFREQ ++
Sbjct: 65 RVPLGHGRACWRRARRRLLSWEMHEGSTWSAVLVED---PPGRSLVTLAALPSPRLPLLWVSNPCRAVRRRVGR-----------------------------------RRCSVGYSTLSGHLLEGEEKMDVVWSRE--------------------------TDEVAFEVVSHSRGAGPLGKLLFPALSSTQRRFFREQCRCMQ 205
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: A0A4D9CTF5_9STRA (DUF1990 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTF5_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 9.800e-16 Identity = 67/187 (35.83%), Postives = 90/187 (48.13%), Query Frame = 2
Query: 716 EGSPWAGIVLDQAGQPVRQEARH---LATFARACGGLAWCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRAIV 1267
+G+P GIV + G + T AR GG AW +NPC + YE DR R ++ + W SAVAY T+ HLI GEERMRV+W+ +G G XXXXX VWFE+ S++RG+G +GRLLFP + MQ FF+EQ ++ +V
Sbjct: 243 QGAPTTGIVRGREGXXXXXXXXXXVGVVTLARVYGGGAWVMNPCCVAYESFDR-QDRDGEGEEGRKGXXXXXXXXXRARVW---------SAVAYTTVGRHLIAGEERMRVIWYPRGRGXXX--------------XXXXXGEDEVWFEIVSVARGNGWVGRLLFPSTQRMQRHFFQEQLRGMQYMV 405
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: A0A7S3WZF0_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WZF0_9SPIT) HSP 1 Score: 84.3 bits (207), Expect = 1.250e-14 Identity = 66/207 (31.88%), Postives = 88/207 (42.51%), Query Frame = 2
Query: 647 VCLGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAGQPVRQEARHLATFARACGGLAWCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRAIV 1267
V LG G ++++ R ALL WRMH+GS W+ I D++G V LA L W +NPC+ VD L ++G V YATL+GHLI GEE M V +++ G V FEV S SRG+ GRL+F + Q RFFREQ ++A+V
Sbjct: 75 VNLGRGNRSWDVARAALLEWRMHDGSSWSAIHRDRSGSVVT-----LAALPHPRIPLLWVLNPCR----EVDYSL------------------------------NAGDHCCVGYATLKGHLIAGEESMSV--YRKASGE-------------------------VCFEVLSRSRGANLFGRLIFLGLAKTQDRFFREQCRCMQALV 215
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: W7TFL2_9STRA (DUF1990 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFL2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.210e-12 Identity = 63/210 (30.00%), Postives = 89/210 (42.38%), Query Frame = 2
Query: 644 RVCLGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAGQPVRQEARHLATFARACGGLAWCVNPCQ--IMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRAIV 1267
RV LG+G Y L +D ++ W E W + G V + R T+ GL W +NP + + +E+ P G G +AVA +TLRGHL+EGEER V WF+ G D VWF+V S S+G+ PLGRLL P++RP+Q RF + ++ +V
Sbjct: 230 RVLLGKGPETYALAKDKIVNWSWGEEVKWVRFSEGEHGINVVSQIR---TY-----GLLWTMNPLRKVLCHEK-------------------------------PWGKRGGAVAAVAVSTLRGHLLEGEERFCV-WFEGGRQGD------------------------VWFDVLSFSKGAFPLGRLLMPVVRPLQNRFLVDVGRAMQKLV 375
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: L1JWA7_GUITC (DUF1990 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JWA7_GUITC) HSP 1 Score: 64.3 bits (155), Expect = 9.630e-9 Identity = 50/149 (33.56%), Postives = 66/149 (44.30%), Query Frame = 2
Query: 821 WCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRAIV 1267
W NPC+ +YE VD PL + A D D F + + S + S +GHLI GEER+ V+W D V+F + S+S GSG +G LLFP MRPMQ RFF Q D+++ V
Sbjct: 2 WVRNPCRQVYEDVDVPL-KHRARDA-------DCFFNQL-------SPSARLS-------QGHLIRGEERLAVLWDGYEPSKDPSSSELGR----------------VYFAIRSVSAGSGLVGSLLFPFMRPMQDRFFASQLDSMQTSV 112
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: A0A7S1XVY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVY1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.150e-6 Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 2
Query: 977 SAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGP--LGRLLFPLMRPMQARFFREQADTLRAIVQRGAVA 1285
SAVA++T +GHL++GEER V W G G VWF++ SISRGSGP + L ++P+Q FF +QA T+ + + A A
Sbjct: 52 SAVAFSTQKGHLLQGEERFAVEWHNAGNGPGE-----------------------VWFDLRSISRGSGPFPIRSALMLAVKPLQRGFFTDQARTMLRLSEEKAEA 133
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Match: A0A8J6CD17_DIALT (DUF1990 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CD17_DIALT) HSP 1 Score: 60.1 bits (144), Expect = 2.070e-6 Identity = 59/220 (26.82%), Postives = 82/220 (37.27%), Query Frame = 2
Query: 617 STQAAHAHCRVC-----LGEGRIAYELGRDALLAWRMHEGSPWAGIVLDQAGQPVRQEARHLATFARACGGLAWCVNPCQIMYERVDRPLIRSPAPDQQAEWPTWDPVFEPIPAFWPGGASSGKQSAVAYATLRGHLIEGEERMRVMWFQQGGGNDSGXXXXXXXXXXXXXXXXXXXXXAVWFEVYSISRGSGPLGRLLFPLMRPMQARFFREQADTLRA 1261
S Q H H ++C +G G+ AY+ R AL + G WA + QP AR LAT + C W +NPC++ + A +S +AYATL GHL+EGEE V + G AV V S+S+GSG LG+L P + P++ F D+ A
Sbjct: 51 SGQRPH-HLQLCERAAVIGRGQEAYDRARRALAKGELLVGVDWAAVHF--LAQPA--VARDLATVVK-CYRCVWSLNPCRVTHV-----------------------------------ALGTTRSTLAYATLDGHLLEGEEAFDVRLERDG---------------------------AVHVRVTSLSKGSGVLGKLAVPFIIPIRRAFLAAAVDSFAA 202 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1124.1 >prot_S-ischiensis_contig1.1124.1 ID=prot_S-ischiensis_contig1.1124.1|Name=mRNA_S-ischiensis_contig1.1124.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=197bp MHEGSPWAGIVLDQAGQPVRQEARHLATFARACGGLAWCVNPCQIMYERVback to top mRNA from alignment at S-ischiensis_contig1:7650528..7653687+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1124.1 ID=mRNA_S-ischiensis_contig1.1124.1|Name=mRNA_S-ischiensis_contig1.1124.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3160bp|location=Sequence derived from alignment at S-ischiensis_contig1:7650528..7653687+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7650528..7653687+ >mRNA_S-ischiensis_contig1.1124.1 ID=mRNA_S-ischiensis_contig1.1124.1|Name=mRNA_S-ischiensis_contig1.1124.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1182bp|location=Sequence derived from alignment at S-ischiensis_contig1:7650528..7653687+ (Schizocladia ischiensis KU_0333)back to top |