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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 920 |
| Cds size | 909 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815376.413361-UTR-S-ischiensis_contig1:7520900..7520910 | 1622815376.413361-UTR-S-ischiensis_contig1:7520900..7520910 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7520901..7520910 + |
| 1695739665.6677942-UTR-S-ischiensis_contig1:7520900..7520910 | 1695739665.6677942-UTR-S-ischiensis_contig1:7520900..7520910 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig1 7520901..7520910 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815376.428855-CDS-S-ischiensis_contig1:7520910..7521819 | 1622815376.428855-CDS-S-ischiensis_contig1:7520910..7521819 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7520911..7521819 + |
| 1695739665.67679-CDS-S-ischiensis_contig1:7520910..7521819 | 1695739665.67679-CDS-S-ischiensis_contig1:7520910..7521819 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7520911..7521819 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1099.1 >prot_S-ischiensis_contig1.1099.1 ID=prot_S-ischiensis_contig1.1099.1|Name=mRNA_S-ischiensis_contig1.1099.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=303bp
MWEGPPGALDGLLGCWPLLNTILAGHGPTAKTRGVAVLGPGGGGGGSDRP
QAPAPCPADALVTDCEWVVSAPPFAPLSEHDVAVLTGWTPRLPAPPLPLF
SRGGPPAHENDTLPRPPPPSPPTHRSGLADMPSPPPPPPPPHVAARPVQG
EAHLLLRAPHLFLGDDFGPGETTAAAWSLLRALSLMVGGTARARAAADAK
DRSARAAQAARRVAEAAAIRGTAEAVAAVAVAVRARARVQGEVGKADRGA
LAEDDGGSDALGADGVAGDEGAGDPGELMGESVAEVAAAAARTCAALNAE
EEE back to topmRNA from alignment at S-ischiensis_contig1:7520901..7521819+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1099.1 ID=mRNA_S-ischiensis_contig1.1099.1|Name=mRNA_S-ischiensis_contig1.1099.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=919bp|location=Sequence derived from alignment at S-ischiensis_contig1:7520901..7521819+ (Schizocladia ischiensis KU_0333)
GGGGGGTACCATGTGGGAAGGGCCTCCCGGCGCCCTCGATGGGCTGCTGG
GGTGCTGGCCGCTGCTGAACACCATCCTGGCAGGCCACGGGCCCACTGCG
AAGACTCGGGGGGTCGCAGTTCTTGGGCCTGGTGGCGGCGGCGGCGGCAG
CGACAGGCCTCAGGCCCCTGCCCCGTGCCCTGCTGATGCACTGGTGACCG
ACTGCGAGTGGGTCGTGTCGGCACCCCCCTTTGCGCCCCTTAGTGAGCAC
GACGTGGCCGTGTTGACGGGGTGGACCCCGCGGCTGCCGGCCCCGCCGCT
GCCGCTATTTTCTCGGGGCGGACCCCCGGCCCACGAGAACGACACCCTGC
CTCGGCCTCCTCCTCCCTCCCCTCCTACGCATCGCAGCGGCCTTGCTGAC
ATGCCCTCCCCTCCGCCGCCGCCGCCGCCGCCGCACGTGGCGGCCCGACC
GGTTCAGGGCGAAGCCCACCTGCTCTTGAGGGCCCCGCATCTCTTCTTGG
GGGACGATTTCGGCCCCGGGGAGACGACGGCGGCGGCGTGGTCGCTGCTG
CGGGCCCTGTCGCTAATGGTTGGCGGTACGGCGCGGGCGCGGGCGGCTGC
AGATGCCAAGGACCGGTCGGCGCGCGCGGCACAGGCAGCGAGGAGGGTGG
CCGAGGCTGCCGCCATCCGAGGCACGGCGGAGGCGGTGGCGGCGGTGGCA
GTGGCAGTGAGGGCCCGGGCGAGGGTGCAGGGAGAGGTCGGGAAGGCCGA
CCGGGGAGCGTTGGCAGAAGATGATGGTGGCAGTGATGCCCTGGGCGCCG
ATGGGGTGGCCGGGGACGAGGGTGCAGGGGATCCGGGGGAGCTCATGGGT
GAGTCGGTGGCCGAGGTGGCGGCGGCTGCTGCCAGGACGTGTGCAGCTCT
GAACGCGGAGGAGGAGGAG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7520901..7521819+ >mRNA_S-ischiensis_contig1.1099.1 ID=mRNA_S-ischiensis_contig1.1099.1|Name=mRNA_S-ischiensis_contig1.1099.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1818bp|location=Sequence derived from alignment at S-ischiensis_contig1:7520901..7521819+ (Schizocladia ischiensis KU_0333)
ATGTGGGAAGGGCCTCCCGGCGCCCTCGATGGGCTGCTGGGGTGCTGGCC
GCTGCTGAACACCATCCTGGCAGGCCACGGGCCCACTGCGAAGACTCGGG
GGGTCGCAGTTCTTGGGCCTGGTGGCGGCGGCGGCGGCAGCGACAGGCCT
CAGGCCCCTGCCCCGTGCCCTGCTGATGCACTGGTGACCGACTGCGAGTG
GGTCGTGTCGGCACCCCCCTTTGCGCCCCTTAGTGAGCACGACGTGGCCG
TGTTGACGGGGTGGACCCCGCGGCTGCCGGCCCCGCCGCTGCCGCTATTT
TCTCGGGGCGGACCCCCGGCCCACGAGAACGACACCCTGCCTCGGCCTCC
TCCTCCCTCCCCTCCTACGCATCGCAGCGGCCTTGCTGACATGCCCTCCC
CTCCGCCGCCGCCGCCGCCGCCGCACGTGGCGGCCCGACCGGTTCAGGGC
GAAGCCCACCTGCTCTTGAGGGCCCCGCATCTCTTCTTGGGGGACGATTT
CGGCCCCGGGGAGACGACGGCGGCGGCGTGGTCGCTGCTGCGGGCCCTGT
CGCTAATGGTTGGCGGTACGGCGCGGGCGCGGGCGGCTGCAGATGCCAAG
GACCGGTCGGCGCGCGCGGCACAGGCAGCGAGGAGGGTGGCCGAGGCTGC
CGCCATCCGAGGCACGGCGGAGGCGGTGGCGGCGGTGGCAGTGGCAGTGA
GGGCCCGGGCGAGGGTGCAGGGAGAGGTCGGGAAGGCCGACCGGGGAGCG
TTGGCAGAAGATGATGGTGGCAGTGATGCCCTGGGCGCCGATGGGGTGGC
CGGGGACGAGGGTGCAGGGGATCCGGGGGAGCTCATGGGTGAGTCGGTGG
CCGAGGTGGCGGCGGCTGCTGCCAGGACGTGTGCAGCTCTGAACGCGGAG
GAGGAGGAGATGTGGGAAGGGCCTCCCGGCGCCCTCGATGGGCTGCTGGG
GTGCTGGCCGCTGCTGAACACCATCCTGGCAGGCCACGGGCCCACTGCGA
AGACTCGGGGGGTCGCAGTTCTTGGGCCTGGTGGCGGCGGCGGCGGCAGC
GACAGGCCTCAGGCCCCTGCCCCGTGCCCTGCTGATGCACTGGTGACCGA
CTGCGAGTGGGTCGTGTCGGCACCCCCCTTTGCGCCCCTTAGTGAGCACG
ACGTGGCCGTGTTGACGGGGTGGACCCCGCGGCTGCCGGCCCCGCCGCTG
CCGCTATTTTCTCGGGGCGGACCCCCGGCCCACGAGAACGACACCCTGCC
TCGGCCTCCTCCTCCCTCCCCTCCTACGCATCGCAGCGGCCTTGCTGACA
TGCCCTCCCCTCCGCCGCCGCCGCCGCCGCCGCACGTGGCGGCCCGACCG
GTTCAGGGCGAAGCCCACCTGCTCTTGAGGGCCCCGCATCTCTTCTTGGG
GGACGATTTCGGCCCCGGGGAGACGACGGCGGCGGCGTGGTCGCTGCTGC
GGGCCCTGTCGCTAATGGTTGGCGGTACGGCGCGGGCGCGGGCGGCTGCA
GATGCCAAGGACCGGTCGGCGCGCGCGGCACAGGCAGCGAGGAGGGTGGC
CGAGGCTGCCGCCATCCGAGGCACGGCGGAGGCGGTGGCGGCGGTGGCAG
TGGCAGTGAGGGCCCGGGCGAGGGTGCAGGGAGAGGTCGGGAAGGCCGAC
CGGGGAGCGTTGGCAGAAGATGATGGTGGCAGTGATGCCCTGGGCGCCGA
TGGGGTGGCCGGGGACGAGGGTGCAGGGGATCCGGGGGAGCTCATGGGTG
AGTCGGTGGCCGAGGTGGCGGCGGCTGCTGCCAGGACGTGTGCAGCTCTG
AACGCGGAGGAGGAGGAG back to top
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