|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1554 |
| Cds size | 1554 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815376.3738706-CDS-S-ischiensis_contig1:7519326..7520880 | 1622815376.3738706-CDS-S-ischiensis_contig1:7519326..7520880 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7519327..7520880 + |
| 1695739665.6589713-CDS-S-ischiensis_contig1:7519326..7520880 | 1695739665.6589713-CDS-S-ischiensis_contig1:7519326..7520880 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7519327..7520880 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1098.1 >prot_S-ischiensis_contig1.1098.1 ID=prot_S-ischiensis_contig1.1098.1|Name=mRNA_S-ischiensis_contig1.1098.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=518bp
ARAGAGGTGGATSAVRSSNTGSYGGGGADGEDLGRHSQGRGSAAGQDKEE
EEDGPDAALAHLVMWCFCVDFSPADAEFLAESGLVGILHEAISVERRQAA
AARSLSGPVAVPAAQEEEAGGGSSGNGDGPWLVAQHGPLLRGQTATSAWQ
PRAQHTHSSLGWAPWPATAVAVALRRGRLSKRAVLQHLCHGPGSLVRGMW
RAGGHGSDLTPTGALLSAAARSCSVEEVIDAFQAASLGRGPQPGVGGGFG
HAGVAVWAGRDTGSRSAGPRAAGARPRRRQLCLHLKGNKSSCVRLLLPPV
PPPSDTGRVGAALEMWLRPQGVGVFHLLSADNVSSTGGDDGGSGGGSSAG
SPAGGGGLRLLLCGGRPEASLWGHRHRFHDEVPPGAWVHLALVLSWEGPA
GGGGGGAGEQGSPCGGSLKLYLNGEHKETALFPTGAGPLLVREVVLGKPP
PDLEETCGGACGRLSHLRLWCQPLSGREIRARFRGPVPCADFRSRAGTGS
RAGGAGMAGAPPPATSDL back to topmRNA from alignment at S-ischiensis_contig1:7519327..7520880+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1098.1 ID=mRNA_S-ischiensis_contig1.1098.1|Name=mRNA_S-ischiensis_contig1.1098.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1554bp|location=Sequence derived from alignment at S-ischiensis_contig1:7519327..7520880+ (Schizocladia ischiensis KU_0333)
GCCAGGGCCGGCGCTGGGGGGACGGGCGGGGCCACATCTGCTGTACGGTC
CAGCAACACCGGCAGCTACGGCGGCGGTGGTGCGGACGGTGAAGACTTGG
GGCGACATAGCCAGGGGAGGGGCAGTGCGGCAGGGCAGGACAAGGAGGAA
GAGGAGGATGGGCCTGATGCCGCCCTGGCCCACCTGGTGATGTGGTGTTT
CTGCGTGGACTTCTCCCCTGCTGACGCCGAATTCCTGGCAGAGAGCGGCC
TGGTCGGCATCCTCCACGAGGCAATCTCCGTGGAGAGACGGCAGGCTGCC
GCCGCGCGCTCCCTGTCCGGCCCGGTTGCAGTGCCAGCAGCGCAGGAGGA
GGAGGCGGGCGGCGGCAGCAGTGGCAACGGCGACGGGCCGTGGCTGGTTG
CCCAGCACGGGCCACTTTTACGGGGACAGACGGCCACCTCTGCGTGGCAG
CCGAGAGCGCAGCATACGCACAGCTCCCTGGGGTGGGCACCATGGCCAGC
AACAGCGGTGGCGGTGGCGCTGCGTCGGGGCCGTCTCTCCAAGCGCGCGG
TCCTGCAGCACCTCTGCCACGGCCCGGGCAGCCTGGTCCGCGGCATGTGG
CGGGCTGGGGGCCACGGGTCCGACCTTACCCCCACAGGAGCCTTGCTGTC
CGCGGCGGCGCGTTCGTGCAGCGTGGAGGAGGTCATCGACGCCTTTCAGG
CGGCCTCTCTCGGCAGGGGGCCGCAGCCCGGGGTCGGGGGTGGATTTGGA
CACGCGGGGGTGGCCGTCTGGGCTGGGCGTGACACAGGCAGCCGCTCGGC
CGGACCACGTGCAGCCGGCGCTCGACCGCGGCGGAGGCAACTGTGTCTGC
ACCTCAAGGGCAACAAGTCGAGCTGCGTCCGACTGCTGCTGCCGCCGGTG
CCACCGCCGAGTGACACGGGCAGGGTGGGAGCCGCCTTGGAGATGTGGCT
GCGGCCGCAGGGGGTGGGCGTGTTCCACCTGCTTTCCGCAGACAATGTCT
CTTCCACCGGCGGGGACGACGGCGGCAGCGGCGGTGGCAGCAGTGCCGGT
AGCCCCGCTGGTGGCGGGGGGCTGCGCCTACTCCTGTGCGGCGGGAGGCC
TGAAGCTTCGCTGTGGGGCCACCGACACCGCTTCCACGACGAGGTGCCCC
CCGGCGCGTGGGTCCACCTGGCCCTCGTGCTCTCCTGGGAAGGCCCGGCT
GGCGGCGGCGGCGGCGGCGCCGGCGAACAAGGGAGTCCGTGCGGGGGCAG
CCTGAAGCTATATCTGAACGGGGAGCACAAGGAGACGGCCCTTTTCCCCA
CAGGGGCGGGGCCCCTACTGGTGCGAGAGGTCGTCCTGGGAAAGCCGCCG
CCGGATCTCGAGGAAACCTGCGGAGGTGCCTGCGGCCGCTTGTCCCACCT
GCGCCTCTGGTGCCAGCCCCTCTCCGGGCGTGAGATACGCGCCCGCTTCC
GGGGGCCCGTTCCGTGCGCCGACTTCAGGAGCAGGGCCGGAACAGGCAGC
CGTGCCGGCGGCGCAGGCATGGCCGGCGCTCCACCACCAGCCACGTCTGA
TCTG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7519327..7520880+ >mRNA_S-ischiensis_contig1.1098.1 ID=mRNA_S-ischiensis_contig1.1098.1|Name=mRNA_S-ischiensis_contig1.1098.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3108bp|location=Sequence derived from alignment at S-ischiensis_contig1:7519327..7520880+ (Schizocladia ischiensis KU_0333)
GCCAGGGCCGGCGCTGGGGGGACGGGCGGGGCCACATCTGCTGTACGGTC
CAGCAACACCGGCAGCTACGGCGGCGGTGGTGCGGACGGTGAAGACTTGG
GGCGACATAGCCAGGGGAGGGGCAGTGCGGCAGGGCAGGACAAGGAGGAA
GAGGAGGATGGGCCTGATGCCGCCCTGGCCCACCTGGTGATGTGGTGTTT
CTGCGTGGACTTCTCCCCTGCTGACGCCGAATTCCTGGCAGAGAGCGGCC
TGGTCGGCATCCTCCACGAGGCAATCTCCGTGGAGAGACGGCAGGCTGCC
GCCGCGCGCTCCCTGTCCGGCCCGGTTGCAGTGCCAGCAGCGCAGGAGGA
GGAGGCGGGCGGCGGCAGCAGTGGCAACGGCGACGGGCCGTGGCTGGTTG
CCCAGCACGGGCCACTTTTACGGGGACAGACGGCCACCTCTGCGTGGCAG
CCGAGAGCGCAGCATACGCACAGCTCCCTGGGGTGGGCACCATGGCCAGC
AACAGCGGTGGCGGTGGCGCTGCGTCGGGGCCGTCTCTCCAAGCGCGCGG
TCCTGCAGCACCTCTGCCACGGCCCGGGCAGCCTGGTCCGCGGCATGTGG
CGGGCTGGGGGCCACGGGTCCGACCTTACCCCCACAGGAGCCTTGCTGTC
CGCGGCGGCGCGTTCGTGCAGCGTGGAGGAGGTCATCGACGCCTTTCAGG
CGGCCTCTCTCGGCAGGGGGCCGCAGCCCGGGGTCGGGGGTGGATTTGGA
CACGCGGGGGTGGCCGTCTGGGCTGGGCGTGACACAGGCAGCCGCTCGGC
CGGACCACGTGCAGCCGGCGCTCGACCGCGGCGGAGGCAACTGTGTCTGC
ACCTCAAGGGCAACAAGTCGAGCTGCGTCCGACTGCTGCTGCCGCCGGTG
CCACCGCCGAGTGACACGGGCAGGGTGGGAGCCGCCTTGGAGATGTGGCT
GCGGCCGCAGGGGGTGGGCGTGTTCCACCTGCTTTCCGCAGACAATGTCT
CTTCCACCGGCGGGGACGACGGCGGCAGCGGCGGTGGCAGCAGTGCCGGT
AGCCCCGCTGGTGGCGGGGGGCTGCGCCTACTCCTGTGCGGCGGGAGGCC
TGAAGCTTCGCTGTGGGGCCACCGACACCGCTTCCACGACGAGGTGCCCC
CCGGCGCGTGGGTCCACCTGGCCCTCGTGCTCTCCTGGGAAGGCCCGGCT
GGCGGCGGCGGCGGCGGCGCCGGCGAACAAGGGAGTCCGTGCGGGGGCAG
CCTGAAGCTATATCTGAACGGGGAGCACAAGGAGACGGCCCTTTTCCCCA
CAGGGGCGGGGCCCCTACTGGTGCGAGAGGTCGTCCTGGGAAAGCCGCCG
CCGGATCTCGAGGAAACCTGCGGAGGTGCCTGCGGCCGCTTGTCCCACCT
GCGCCTCTGGTGCCAGCCCCTCTCCGGGCGTGAGATACGCGCCCGCTTCC
GGGGGCCCGTTCCGTGCGCCGACTTCAGGAGCAGGGCCGGAACAGGCAGC
CGTGCCGGCGGCGCAGGCATGGCCGGCGCTCCACCACCAGCCACGTCTGA
TCTGGCCAGGGCCGGCGCTGGGGGGACGGGCGGGGCCACATCTGCTGTAC
GGTCCAGCAACACCGGCAGCTACGGCGGCGGTGGTGCGGACGGTGAAGAC
TTGGGGCGACATAGCCAGGGGAGGGGCAGTGCGGCAGGGCAGGACAAGGA
GGAAGAGGAGGATGGGCCTGATGCCGCCCTGGCCCACCTGGTGATGTGGT
GTTTCTGCGTGGACTTCTCCCCTGCTGACGCCGAATTCCTGGCAGAGAGC
GGCCTGGTCGGCATCCTCCACGAGGCAATCTCCGTGGAGAGACGGCAGGC
TGCCGCCGCGCGCTCCCTGTCCGGCCCGGTTGCAGTGCCAGCAGCGCAGG
AGGAGGAGGCGGGCGGCGGCAGCAGTGGCAACGGCGACGGGCCGTGGCTG
GTTGCCCAGCACGGGCCACTTTTACGGGGACAGACGGCCACCTCTGCGTG
GCAGCCGAGAGCGCAGCATACGCACAGCTCCCTGGGGTGGGCACCATGGC
CAGCAACAGCGGTGGCGGTGGCGCTGCGTCGGGGCCGTCTCTCCAAGCGC
GCGGTCCTGCAGCACCTCTGCCACGGCCCGGGCAGCCTGGTCCGCGGCAT
GTGGCGGGCTGGGGGCCACGGGTCCGACCTTACCCCCACAGGAGCCTTGC
TGTCCGCGGCGGCGCGTTCGTGCAGCGTGGAGGAGGTCATCGACGCCTTT
CAGGCGGCCTCTCTCGGCAGGGGGCCGCAGCCCGGGGTCGGGGGTGGATT
TGGACACGCGGGGGTGGCCGTCTGGGCTGGGCGTGACACAGGCAGCCGCT
CGGCCGGACCACGTGCAGCCGGCGCTCGACCGCGGCGGAGGCAACTGTGT
CTGCACCTCAAGGGCAACAAGTCGAGCTGCGTCCGACTGCTGCTGCCGCC
GGTGCCACCGCCGAGTGACACGGGCAGGGTGGGAGCCGCCTTGGAGATGT
GGCTGCGGCCGCAGGGGGTGGGCGTGTTCCACCTGCTTTCCGCAGACAAT
GTCTCTTCCACCGGCGGGGACGACGGCGGCAGCGGCGGTGGCAGCAGTGC
CGGTAGCCCCGCTGGTGGCGGGGGGCTGCGCCTACTCCTGTGCGGCGGGA
GGCCTGAAGCTTCGCTGTGGGGCCACCGACACCGCTTCCACGACGAGGTG
CCCCCCGGCGCGTGGGTCCACCTGGCCCTCGTGCTCTCCTGGGAAGGCCC
GGCTGGCGGCGGCGGCGGCGGCGCCGGCGAACAAGGGAGTCCGTGCGGGG
GCAGCCTGAAGCTATATCTGAACGGGGAGCACAAGGAGACGGCCCTTTTC
CCCACAGGGGCGGGGCCCCTACTGGTGCGAGAGGTCGTCCTGGGAAAGCC
GCCGCCGGATCTCGAGGAAACCTGCGGAGGTGCCTGCGGCCGCTTGTCCC
ACCTGCGCCTCTGGTGCCAGCCCCTCTCCGGGCGTGAGATACGCGCCCGC
TTCCGGGGGCCCGTTCCGTGCGCCGACTTCAGGAGCAGGGCCGGAACAGG
CAGCCGTGCCGGCGGCGCAGGCATGGCCGGCGCTCCACCACCAGCCACGT
CTGATCTG back to top
|