|
|
Homology
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: D8LF98_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF98_ECTSI) HSP 1 Score: 362 bits (929), Expect = 6.820e-118 Identity = 239/435 (54.94%), Postives = 290/435 (66.67%), Query Frame = 1
Query: 136 VGGVSDPSR-EGGLKDKFSTGRRRLKETVAQKTGREGADDTEFEERVQRVETLREKVNKVRDSMKRQLDCSRALCLACADLGNACSDADVRDVQFQNTQYQLDESIRKTLDDDVVAALDSLDKKLLPFQELDKLVQTRGRLKLDFDHYVRKVRELKEKPNPDTAKLSNNEAKLDASRQRLHEATNRLYRAFSYYDAIGGRLCLPEVEMFKRAQLNFFRASHDAVKDMSIKDPKVVAAEMESIGKEGMSRP-------------GNVSAFSTEGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSHAQTADTQPXXXXXXXXXXXXXXPFAXXXXXXXXXXAPVQRARALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYVELM 1398
VGG +DP+ +GG+ DKFSTGRRRLKE +AQKTG+E D++EFEER QRV L+EKV KVRD+MKRQLDCSRALCLACADLGNACS+ +RDV FQN Q+QLDE +RK LD V A++SL+ K+ PF ELDK++ +R +LKLD+DHY+RKVR+LKEKP D AKLSNNEAKL A+RQRL EAT +LY+ F YYDA+GG LC PE+EM K+AQ FF ++ VK + +DP+ VA E+ES+GK+GM+ P G +S S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADTQP P A Q+ARAL+SY A D TE+SL EV+TV+++D+SGWWTGEKGG+KGLFPSNYV L+
Sbjct: 33 VGGGADPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTKGPP--------APPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI 459
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A835YV50_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV50_9STRA) HSP 1 Score: 273 bits (697), Expect = 2.830e-83 Identity = 230/420 (54.76%), Postives = 282/420 (67.14%), Query Frame = 1
Query: 169 GLKDKFSTGRRRLKETVAQKTGREGADDTEFEERVQRVETLREKVNKVRDSMKRQLDCSRALCLACADLGNACSDADVRDVQFQNTQYQLDESIRKTLDDDVVAALDSLDKKLLPFQELDKLVQTRGRLKLDFDHYVRKVRELKEKPNPDTAKLSNNEAKLDASRQRLHEATNRLYRAFSYYDAIGGRLCLPEVEMFKRAQLNFFRASHDAVKDMSIKDPKVVAAEMESIGKEGMSRP------GNVSAFST----EGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSHAQTADTQPXXXXXXXXXXXXXXPFAXXXXXXXXXXAPVQ---RARALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYV 1389
G+K K + RRR E + QK G+EG DD +FE+R + + L KV KVRDSMK LD +RA+ DL NAC DAD RD F TQ QLD+++R LDD V ALDSLD+KL PF+ELD+ V+TR LKLD+DHYVRKVRELKEK D +K++NNE KL+A+R +H+AT +Y+AF+YYDA+GGRL PEVE FK AQ F+ A+ + VKD+ ++DP VAAE++ +G++G +RP G+ +A S+ + SG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P P A P Q ARALY Y A D TE+SL +VI V+ K +SGWW GEK G +GLFP+NYV
Sbjct: 37 GIKGKMAVNRRRFNEKLGQKMGKEGTDDADFEDRHRATQDLHFKVCKVRDSMKALLDATRAMSQRAVDLSNACGDADARDQDFITTQLQLDQAMRSMLDDSVGKALDSLDRKLAPFKELDERVKTRNNLKLDYDHYVRKVRELKEKSGADASKIANNEMKLEAARVAVHKATLSVYKAFNYYDAVGGRLVAPEVEAFKAAQRAFYMAALNCVKDVPLRDPVQVAAEVDRLGEDGSNRPVATGYDGSYAAASSAHNRQSSGLAQSQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPNPFGT---------PVAVAVPMGIAPPPPSQGGGSARALYDYTAHDNTELSLTTGDVIRVMEKHESGWWVGEKAGVRGLFPANYV 447
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A058ZG03_FONAL (Myosin I n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZG03_FONAL) HSP 1 Score: 74.3 bits (181), Expect = 2.460e-10 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 1243 RALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYVELM 1398
RALY YAA +A E+SL+ +V+++ AKD GWWTG G+KGLFPSNYVE++
Sbjct: 1062 RALYDYAACEADELSLSVGDVVSITAKDDGGWWTGTCNGRKGLFPSNYVEMI 1113
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A167KG51_CALVF (SH3-domain-containing protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167KG51_CALVF) HSP 1 Score: 60.8 bits (146), Expect = 3.020e-8 Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 1243 RALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYVELM 1398
RALY Y+ATDA ++ +VI +L + +SGWW G G++G FPSNYVE++
Sbjct: 20 RALYDYSATDAACLAFRKGDVIELLERMESGWWDGLLNGERGWFPSNYVEVL 71
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A437CTK7_ORYJA (SH3 domain-containing protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A437CTK7_ORYJA) HSP 1 Score: 64.3 bits (155), Expect = 6.190e-8 Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 1237 RARALYSYAATDATEISLAANEVITVLAKDKSGWWTGE-KGGQKGLFPSNYVELM 1398
RARALY Y A D TEI+ +++IT + K GWW G GG GLFPSNYVEL+
Sbjct: 198 RARALYDYQAADETEITFDPDDIITNIEKIDEGWWRGVGPGGNSGLFPSNYVELL 252
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: UPI001CFE5D1E (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFE5D1E) HSP 1 Score: 65.5 bits (158), Expect = 7.310e-8 Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1237 RARALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYV 1389
+ +ALY+Y AT E++L ++IT+L KD SGWW GE+ G++GLFP NYV
Sbjct: 336 KVKALYNYQATADDELTLREGDIITLLDKDPSGWWEGERAGKRGLFPGNYV 386
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A7S4IKQ9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IKQ9_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 9.960e-8 Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 1237 RARALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYVELM 1398
RARALYSY AT+ +E+S N+++ V +D+SGWW E G+ G PSNY+ L+
Sbjct: 444 RARALYSYEATNDSELSFNGNDILAVTEQDESGWWFAEMNGKSGFIPSNYMSLL 497
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A1Y1XH37_9FUNG (Uncharacterized protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XH37_9FUNG) HSP 1 Score: 65.5 bits (158), Expect = 1.530e-7 Identity = 28/52 (53.85%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1243 RALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQ--KGLFPSNYVE 1392
+A+Y+Y A++A E++ +A ++I V++KD SGWWTG K G+ KGLFPSNYV+
Sbjct: 1092 KAIYAYQASEADELTFSAGDIIYVISKDDSGWWTGVKQGEQKKGLFPSNYVQ 1143
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A6A5BMQ6_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BMQ6_NAEFO) HSP 1 Score: 65.1 bits (157), Expect = 1.970e-7 Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1237 RARALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQKGLFPSNYV 1389
+ +ALY+Y A+ E++L ++IT+L KD SGWW GEK G++GLFP NYV
Sbjct: 989 KVKALYNYQASADDELTLREGDIITLLDKDPSGWWEGEKNGKRGLFPGNYV 1039
BLAST of mRNA_S-ischiensis_contig1.1064.1 vs. uniprot
Match: A0A1Y3NTD8_PIRSE (Uncharacterized protein n=2 Tax=Piromyces TaxID=4821 RepID=A0A1Y3NTD8_PIRSE) HSP 1 Score: 65.1 bits (157), Expect = 2.000e-7 Identity = 28/52 (53.85%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1243 RALYSYAATDATEISLAANEVITVLAKDKSGWWTGEKGGQ--KGLFPSNYVE 1392
+A+Y+Y A++A E++ A ++I V++KD+SGWWTG K G+ KGLFPSNYV+
Sbjct: 1046 KAIYAYQASEADELTFNAGDIIYVISKDESGWWTGVKQGEQKKGLFPSNYVQ 1097
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 370.9 |
| Seed ortholog evalue | 8.6e-100 |
| Seed eggNOG ortholog | 2880.D8LF98 |
| KEGG ko | ko:K10356,ko:K12562,ko:K21421 |
| KEGG TC | 5.B.1.1.1 |
| KEGG Pathway | ko04066,ko04144,ko04145,ko04216,ko04217,ko04621,ko04666,ko04670,ko04933,ko05140,map04066,map04144,map04145,map04216,map04217,map04621,map04666,map04670,map04933,map05140 |
| EggNOG free text desc. | translation initiation factor activity |
| EggNOG OGs | COG5022@1,KOG0162@2759 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01009,ko03036,ko04131,ko04147,ko04812 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | SH3 domain |
| Ec32 ortholog | Ec-01_004150.1 |
| Exons | 6 |
| Model size | 1402 |
| Cds size | 1401 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815480.7138112-CDS-S-ischiensis_contig1:7375086..7375228 | 1622815480.7138112-CDS-S-ischiensis_contig1:7375086..7375228 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7375087..7375228 + |
| 1695739726.108716-CDS-S-ischiensis_contig1:7375086..7375228 | 1695739726.108716-CDS-S-ischiensis_contig1:7375086..7375228 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7375087..7375228 + |
| 1622815480.727268-CDS-S-ischiensis_contig1:7377748..7377955 | 1622815480.727268-CDS-S-ischiensis_contig1:7377748..7377955 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7377749..7377955 + |
| 1695739726.1236968-CDS-S-ischiensis_contig1:7377748..7377955 | 1695739726.1236968-CDS-S-ischiensis_contig1:7377748..7377955 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7377749..7377955 + |
| 1622815480.7388918-CDS-S-ischiensis_contig1:7378411..7378647 | 1622815480.7388918-CDS-S-ischiensis_contig1:7378411..7378647 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7378412..7378647 + |
| 1695739726.1383984-CDS-S-ischiensis_contig1:7378411..7378647 | 1695739726.1383984-CDS-S-ischiensis_contig1:7378411..7378647 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7378412..7378647 + |
| 1622815480.7537954-CDS-S-ischiensis_contig1:7379400..7379646 | 1622815480.7537954-CDS-S-ischiensis_contig1:7379400..7379646 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7379401..7379646 + |
| 1695739726.1483057-CDS-S-ischiensis_contig1:7379400..7379646 | 1695739726.1483057-CDS-S-ischiensis_contig1:7379400..7379646 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7379401..7379646 + |
| 1622815480.7670624-CDS-S-ischiensis_contig1:7379840..7380215 | 1622815480.7670624-CDS-S-ischiensis_contig1:7379840..7380215 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7379841..7380215 + |
| 1695739726.1595666-CDS-S-ischiensis_contig1:7379840..7380215 | 1695739726.1595666-CDS-S-ischiensis_contig1:7379840..7380215 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7379841..7380215 + |
| 1622815480.7799573-CDS-S-ischiensis_contig1:7381641..7381836 | 1622815480.7799573-CDS-S-ischiensis_contig1:7381641..7381836 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7381642..7381836 + |
| 1695739726.1707435-CDS-S-ischiensis_contig1:7381641..7381836 | 1695739726.1707435-CDS-S-ischiensis_contig1:7381641..7381836 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig1 7381642..7381836 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1064.1 >prot_S-ischiensis_contig1.1064.1 ID=prot_S-ischiensis_contig1.1064.1|Name=mRNA_S-ischiensis_contig1.1064.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=467bp
PSNPNGSPGEGHDWRMFGRGKPKKKEDEEPAAETKPDADYGGNPNVGGVS DPSREGGLKDKFSTGRRRLKETVAQKTGREGADDTEFEERVQRVETLREK VNKVRDSMKRQLDCSRALCLACADLGNACSDADVRDVQFQNTQYQLDESI RKTLDDDVVAALDSLDKKLLPFQELDKLVQTRGRLKLDFDHYVRKVRELK EKPNPDTAKLSNNEAKLDASRQRLHEATNRLYRAFSYYDAIGGRLCLPEV EMFKRAQLNFFRASHDAVKDMSIKDPKVVAAEMESIGKEGMSRPGNVSAF STEGSGGGGGGGGGGGGGGGDDSPPGDHAGASHPPYNPAATAPWMSTAGG GGGGGGGGGGEGGGGGGQWWDSHAQTADTQPAAGFGGGGGSFSGNPFASG GAAPPPPPAPVQRARALYSYAATDATEISLAANEVITVLAKDKSGWWTGE KGGQKGLFPSNYVELM* back to topmRNA from alignment at S-ischiensis_contig1:7375087..7381836+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig1.1064.1 ID=mRNA_S-ischiensis_contig1.1064.1|Name=mRNA_S-ischiensis_contig1.1064.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6750bp|location=Sequence derived from alignment at S-ischiensis_contig1:7375087..7381836+ (Schizocladia ischiensis KU_0333) CCCAGCAACCCGAACGGGAGCCCCGGTGAGGGTCACGATTGGAGGATGTT
TGGGAGGGGCAAACCCAAAAAGAAAGAGGATGAGGAGCCAGCTGCGGAGA
CCAAACCCGATGCTGACTACGGCGGGAACCCGAACGTGGGAGGTGAGCTC
GCAGAATGAACAGGGTCGCCGGCCAGCGGTGCAAAAGTTCCACCCTCCAA
TGCCGGTGATCCTGATCTGGGGACAATCCCCCGATGTGACCCACCAGCTC
CCCGTTGTACAGCTCTTTTCTTCGGGCCGACAGCAACGCCAAGCGTTTAC
CTCATTTGTGGTCTTCCACAACGAACGGTGGCCGCGGCCCAGTGCCAGAC
AATGCCTGCGAGCACCGGAATTCGTCGGCATTGGCCAACCGTGCTTGAAA
AGGGTGCCACAAGTCGAGCGGGAGATTTAACACAGCGCCAGAGGCTGCCA
TGTGTCCGTAACCCGCGCGAGCAAACATAGGTACTGGATACAGTACACTT
CGAAGAATAGAGTTCTCGCTCACAGCAGTGTATTTACAGTCAGTGTACTT
GAGTACAGCGTTGTATTTTGGAGATGCGTGTACACACAACAATAGAATTC
ACACACGCCCCCGTGTTGGGGTTCCATTCCATTGTTCCTGTTGTTGCCGT
ATTGCGACAAACGGACCGGACCTCTTGCCCCCGCCCGATCCGGCAGTTCA
GCAGCCATCATTGTACCCCGGCCAGACCCATTTTCCCGATGACGGCTTAC
CTGGCGTTCGGCCTGGCTTGCCCGTAGACGACCAGAAGATTGATCTCCCG
GCTGGGAACACGTAATTCCGCAAAGGTTATCTGGGCATGCCTGGCCAACC
AGTGTTTTCTACCAAGGTGGAATCGCCTACTACTGTAGTAGGATTGGCAC
TAACCATGCTACAAAAGTGCGATCGCTATTTTTGGGTGTCAATTTTCCCG
GGCCGCCCTATCAAGGACGCATCGGATGGCCGTGAAATTTCACACGTGAA
AGAGGTCGATGAGTACGTTCATTTGCGCTATAGTTTTCGTATCACAACGC
CACATGGGCCGAGCAACAGGGCAATCGATATTCGCTATTGGGCAAATCGC
TATTTGGGCAAAAGAAATCGCACTTTTGTAGCATGGTTCATTGGCACCAA
AAGCGTGTCACGATAACTTGGGAACGTTGAGGTGGAATACGCGCGAGCTA
TCGCGCTGTTCGTCTCGGCCTTCTCGATCGGAGCACTTCGCGCTCAAGTC
GATACGAGCAATATTTCGGGCTGTAGCCGCGATTTCCCATGTAATGGTTA
GTTGCCGGCTCTCTCCCCCTACTAAATCCTAGATGTAGGGTGGTTGACCA
AATCGGGCGATTGAGGGCTCTATCCATTCGTCTCGATGAGAGGAATCGAT
TGGCGGCGTGTTTTTTCTACCAACGCTGCTTGGTTTGCGCAAAATCGCCC
GAAAAGCGCCGAATCCGTTAACTACTTGATAAATGAACTGGACGCGGATG
GGCGCCAAACTTGCTTCATTTCGCGGTTTCGGGCCATCGATTCGGACCCC
GGTGTTCCAATACCGATTCGAGCCCATGTCGTCGATTGCGCCATCTCAGA
GGTTGCGCCTCTCAGTGGTTGACGAGATACCCGCATTCTATCGAATCGTC
CCGACATTGACCCGATACGTTGCCCCCCGTAGCTCACCACCCACTGAGAG
GCGCAAGGTCTGCGATGGTGCAATCGAAAGCTTACGAGGTGGCCTTCAAT
CGGTATTAGAACGCCGGGGTCCGAATCGATGGCCGAAACCGCGAAATTAA
GGAAGATCGACATTTGTGCCTATCATAGGCGATTCCACCTTGAAGTATAC
TCGTACGCTCTGTGTGTGTACTCACGTTGGACAGGGCACACCCCGTCCTG
TGCATTCCACTGACCGTCTGCCCAGTATACTACTTGCTGGACCGCCGGCC
AGCCCCCGCGGGGTAGCCTTTCGGCCAGTGGCCACGCGTCCCTATTTCGC
CGATACGGAGTATGCCGGGGTCTCACCGGCCAGGCGATGGGTTGACACCG
ATTCCCCGGCTCGCTATTGGGCCCCCGGGACAACGGCATGTTTGCCATAG
GTTCTTAATGTACTGTAGGCCTACAGGGGTTGACTCTCCTCCACTTCATT
CCAAGTACGACATGTGTGTGCGTGGTACTGTACATGCTGTAGTATCCCTG
TGCATTTAGCATGCGTTCGATACACACCGCTCCGGTAGGTTTCACCAAGT
GAGGTTTAATGACTACTGTAGGTACTGTACAGTGTAGGTACCTGTTAATA
CTGTAGGTACGTACATACAGTTGAGTGCTTGTACTTGCAAGTACTGTAGT
TTGCAAGTTACTTAGCTACTGGCACATAGTGTCCCGCAGCTCACAACCCA
GCGGAAAAAATTATAGGCCAAGCCGGTGTTTGTGCCCATGCCGCCCACCA
CCACAATTGCCGTCGGCAGCACGCAAGGGAAACGCCACCACCACCGCCTA
TCACCAGCACCACCCACATCGACCACCACCAACACCACCACCACCACCAC
CACCGCCACCACCAATGCCACCCACCACCACCGCCGCCACCCACTACAAA
CGCCACCACCGCCGCTGCCACCCCTGTGCCCACCCCGTGCGCCTGTTCTG
CCGCTGCCGCAGGTGTGTCAGACCCCTCTCGGGAGGGCGGCCTAAAGGAC
AAGTTCAGCACGGGCCGAAGGAGGCTCAAGGAGACGGTGGCGCAGAAGAC
GGGAAGGGAGGGCGCCGACGACACCGAGTTTGAGGAGCGCGTCCAGAGGG
TGGAGACGCTGCGCGAGAAGGTCAACAAGGTCCGGGACTCCATGAAGAGG
CAGCTCGACTGCTCCCGAGGTTGGTTGATTGGCTTTCGGTTTGGGATGTG
CATGACGAGGTGTTGTATCCTATTGTGGTGTTAGAAGTACGAGCGCTGCA
GTAGGTACTGGAAGAGATTTGGAGGATTGAGCATGGGCGCTTCCAAGAGA
GTACGAGGACGCCTACATACTCGTACGAGTAGTACCGGTAGCAGTGTAAG
TACAGTAGTGCAGGTTCCAAGTATTAACCGGCAGGCAGAAGTATTACCCT
GCCGGTTGAACATATCGAGACGACGGTCTATACGTCCGTCTATCGCTATA
TACATACCGCGCGGTACATGGACTTGTACAATACAAGCGGAACGCAAAAC
TGTTTCGTTCCCGGTGAGTCCCGCCCTATTGAAGCTGTCGTTGAGACACT
GAATGTGGAGTTCTATTCTAACTCAAGGCATCGATTTCAACCACACATCC
GGCGTGCCCACGCTGCCGCCGCCAGCCCTGTGCCTGGCATGCGCGGACCT
GGGCAACGCCTGCTCGGACGCGGATGTGAGGGACGTGCAGTTCCAGAACA
CCCAGTACCAGCTGGACGAGAGCATCCGGAAGACGCTGGACGACGACGTG
GTGGCCGCCCTTGACTCCCTGGACAAGAAGCTGCTCCCCTTCCAGGAGCT
CGACAAGCTCGTGCAGACGCGTGGGCGGCTCAAGCTGGACTTCGACCACT
ACGTCCGGAAGGCGAGAGCTCTCTTTTTGTGAAGGGGGAGGGTGTACGTA
CCAAAGCTACTATAGAGACTTTGGATCCTTCTGTCCGATAGGCGAGAGGG
GTTTGCAGTAGTTCTAGTTATTTTTTGGGGGGAGGAGGGGGAGGCGAGAG
GGGAGGGCGTGAAGGGCATACTGAGACAATGCCATGCAAGCATGACCATT
GATCACGCGTGCCGTATACGAGAGATCCTGTGGGATGGGGAGCTATTTCC
CCTCGTAGGGGAGAGGGGGCGAGCTGGAGCTGGGTGGGGTTCATGGGAAG
GGCGGGGGGGCCTGGTGCAGGGCCGTGGGTGGGTAGGCGTGGCTGGGAGG
GCCTGGCAGGCGGAGCGGACGCACTGAAACCACCTTGTGCTTCTACTGGA
AGCAGAGACACGCAGTTAGACACGCAGTGCAGTCCATGCCAAAGTAGGAG
TTGTACGAGTAGGAGTAAAGCAGGCATGTATTGGAAGTGCTACCGTGCGC
GAGCACTTGCACGCATTCGGCGCCCAACCCGTTCGCGTGCATTTGTCACG
TTTGCACGTACAGACAGACACGCTGACGTGGGCGCGCGCGCGCACACACA
CACACACACACATGCACGCACGCGTGCGCACACGCACACCTCCATGTACA
GTACACACCCCTCCTTGCCTCCTTCCTCACCTACTTCGAAGTGCCTGCTG
CCCACCTGCCAGCCTGCTCTCCCTGCCCGACCCTCATATCGACCCCCGCC
CCCCCCCTGGCCAGGTCCGAGAGCTTAAGGAGAAGCCCAACCCGGACACG
GCCAAGCTGTCCAACAACGAGGCCAAGCTCGACGCCTCAAGGCAGCGCCT
GCACGAGGCCACCAACCGGCTGTACCGTGCCTTCAGCTACTATGACGCCA
TCGGCGGCCGCCTGTGCCTCCCCGAGGTGGAGATGTTCAAGCGGGCCCAG
CTCAACTTCTTCCGCGCCTCGCACGATGCCGTCAAGGACATGTCCATCAA
GGACCCCAAGGTAGGGGGCGGAGGAGGGGGAGGTGGGGGGGGGCATGAAC
ATGTCCATGGAGGACTACAAGGTGAAATTAGGCGCCGGGGGGGTAAACTT
ATGAATGATTGATGAAACCCGTGCCATTTGCAATGAAGCAACTGGCTTCG
CCCACTCCCGTGCATGGACACGCTGCGCGCTCCCAATGCCCCTCCCCTCT
CCAGGTGGTGGCTGCGGAGATGGAGTCCATCGGCAAGGAGGGTATGTCCC
GTCCGGGCAACGTGTCTGCCTTCAGCACCGAGGGAAGCGGCGGCGGCGGC
GGTGGTGGCGGTGGCGGAGGCGGCGGCGGAGGCGACGACTCTCCCCCCGG
CGACCATGCCGGCGCCTCCCACCCCCCGTACAACCCTGCCGCCACCGCCC
CCTGGATGTCCACTGCCGGGGGTGGGGGCGGGGGCGGCGGCGGGGGCGGG
GGCGAGGGCGGAGGCGGAGGCGGGCAATGGTGGGACTCCCATGCGCAGAC
GGCAGACACGCAGCCAGCCGCGGGCTTTGGCGGCGGCGGCGGGAGCTTCT
CGGGGAACCCATTCGCCAGCGGAGGCGCGGTGAGCCATGTTGCACAATCA
GTCAGGCGTGCAGAACGCCTTACAAAATGTCCAGGATGTCCTCGAGCTCT
TAAGTAGGCAAGCACTGCTGTACTGTAGTACACTAGTGCTTACCTACTGT
AAGCGCTGTGGCTTAGTACGAGTAGGTGGGACGGCGAGATAGGTAATGTG
GGAACTTCACGTACGGTCTGCCAGCCCCGGCAATGAACTTTGCGCGTCTG
AAACAAGATACACAAACCGAAACCGGGGGCAACCGCGGCTGCTGAAACAC
AGCTTCCTGTCACAACTGTGCCGCTGTGCCCAACTGGCCACGCCTGGAGA
ACTGGCCTTCGTTACATGCCCCAAAACCTAGAGCTGTGCCGGCAAGGCCG
GTCGGTTGAAATGGTGCGAGTAACCGGCATCGCAGCTGGTTCGGTTTGGG
CTTTGTTGTTTTCAACTACAAGTTTGTCGCGGGGAGTTTTTGCTCGATAG
CGGCTATGTTTCGGCCGAAAGCGGCGACAACGGTAATGTCGCCGTCCACC
GGCTATATCGAACGTCGAAATAGTCACGATCTCAAAGGAGGAAAAAACGG
AGAAACCGGGCCAGGCTTTGGCCGGCAAACCGGAACCGACCGGCGTGAAC
CGGCTCCGGTTCACAGCTCTGCCAAACCACTACTACAGTAGTACTCAAGT
ACGAGCACTGTACGTGGATTCCTTGCACGCTAGCCACAGCCAGTCCTATT
TAGGTAAGACCCAACCCGGGCAATGGTCTCGGTGGAGGTGCGTGGTCAGT
GGTCTCGAGACTTCGGCAAGCACAACGCGAGTACTGCTTGGTACTACTTC
CAAGTGCTAGAAGTAGTACAGTACGCGTGGCTGGTGAAAACAGCGCATGT
TTGGTCTCGGAATGGTAAGGGACGCGAGGCCGGACCAATGACCGGAAGGC
TACCCTCAGGGAGCTGGCCGGCGGTCCAGCAGTACTTGGTACACTGGCCC
GGTGACCAGCGGCATGCACAGGATGGGGTAGCTCCCTGTCCGGCGTGCAT
ACACTACTCGCAAGTATTTTTTGTGGATGCACACGCTTGCTGGAGGAAGT
GCTTGGAATTACGTCGCGCAGCGATAGTACCTCCTTGCCCTCATCGCTCG
CCACCGCCCTCATCACCGCCGCGAGAGGAACAAACTTCCCTTCCATGGCC
TCTTGGCACGATGCTCCCGGTCTTACTCCATACCTGCCCGCACACACGCC
TCCCTCCCGCCCCGTCCCCACGCCGGTGCATACTACTGTAGTAGTCTGTG
GGGACGATCACTCAACGCAATGTCTGCCACTGCCACCCCCCCCACCCCCG
CCCCCGCCCCCGCCGCCCTCGCCGCCGCCACTACCCCTGGCCCTATCCCC
GCCGCCATCTATGCCACCGCCGCGCCCACCCCGCCCGCTGACCGGCCTCT
GGCAGGCGCCGCCCCCGCCGCCGGCGCCGGTGCAGCGCGCGCGCGCCCTG
TACAGCTACGCGGCGACGGACGCGACGGAGATCTCTCTTGCGGCCAACGA
GGTGATCACCGTGCTAGCCAAGGACAAGAGCGGCTGGTGGACGGGCGAGA
AGGGCGGCCAGAAGGGCCTCTTCCCCTCCAACTACGTCGAGCTCATGTGA
back to topCoding sequence (CDS) from alignment at S-ischiensis_contig1:7375087..7381836+ >mRNA_S-ischiensis_contig1.1064.1 ID=mRNA_S-ischiensis_contig1.1064.1|Name=mRNA_S-ischiensis_contig1.1064.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2802bp|location=Sequence derived from alignment at S-ischiensis_contig1:7375087..7381836+ (Schizocladia ischiensis KU_0333) CCCAGCAACCCGAACGGGAGCCCCGGTGAGGGTCACGATTGGAGGATGTT TGGGAGGGGCAAACCCAAAAAGAAAGAGGATGAGGAGCCAGCTGCGGAGA CCAAACCCGATGCTGACTACGGCGGGAACCCGAACGTGGGAGCCCAGCAA CCCGAACGGGAGCCCCGGTGAGGGTCACGATTGGAGGATGTTTGGGAGGG GCAAACCCAAAAAGAAAGAGGATGAGGAGCCAGCTGCGGAGACCAAACCC GATGCTGACTACGGCGGGAACCCGAACGTGGGAGGTGTGTCAGACCCCTC TCGGGAGGGCGGCCTAAAGGACAAGTTCAGCACGGGCCGAAGGAGGCTCA AGGAGACGGTGGCGCAGAAGACGGGAAGGGAGGGCGCCGACGACACCGAG TTTGAGGAGCGCGTCCAGAGGGTGGAGACGCTGCGCGAGAAGGTCAACAA GGTCCGGGACTCCATGAAGAGGCAGCTCGACTGCTCCCGAGGTGTGTCAG ACCCCTCTCGGGAGGGCGGCCTAAAGGACAAGTTCAGCACGGGCCGAAGG AGGCTCAAGGAGACGGTGGCGCAGAAGACGGGAAGGGAGGGCGCCGACGA CACCGAGTTTGAGGAGCGCGTCCAGAGGGTGGAGACGCTGCGCGAGAAGG TCAACAAGGTCCGGGACTCCATGAAGAGGCAGCTCGACTGCTCCCGAGCC CTGTGCCTGGCATGCGCGGACCTGGGCAACGCCTGCTCGGACGCGGATGT GAGGGACGTGCAGTTCCAGAACACCCAGTACCAGCTGGACGAGAGCATCC GGAAGACGCTGGACGACGACGTGGTGGCCGCCCTTGACTCCCTGGACAAG AAGCTGCTCCCCTTCCAGGAGCTCGACAAGCTCGTGCAGACGCGTGGGCG GCTCAAGCTGGACTTCGACCACTACGTCCGGAAGCCCTGTGCCTGGCATG CGCGGACCTGGGCAACGCCTGCTCGGACGCGGATGTGAGGGACGTGCAGT TCCAGAACACCCAGTACCAGCTGGACGAGAGCATCCGGAAGACGCTGGAC GACGACGTGGTGGCCGCCCTTGACTCCCTGGACAAGAAGCTGCTCCCCTT CCAGGAGCTCGACAAGCTCGTGCAGACGCGTGGGCGGCTCAAGCTGGACT TCGACCACTACGTCCGGAAGGTCCGAGAGCTTAAGGAGAAGCCCAACCCG GACACGGCCAAGCTGTCCAACAACGAGGCCAAGCTCGACGCCTCAAGGCA GCGCCTGCACGAGGCCACCAACCGGCTGTACCGTGCCTTCAGCTACTATG ACGCCATCGGCGGCCGCCTGTGCCTCCCCGAGGTGGAGATGTTCAAGCGG GCCCAGCTCAACTTCTTCCGCGCCTCGCACGATGCCGTCAAGGACATGTC CATCAAGGACCCCAAGGTCCGAGAGCTTAAGGAGAAGCCCAACCCGGACA CGGCCAAGCTGTCCAACAACGAGGCCAAGCTCGACGCCTCAAGGCAGCGC CTGCACGAGGCCACCAACCGGCTGTACCGTGCCTTCAGCTACTATGACGC CATCGGCGGCCGCCTGTGCCTCCCCGAGGTGGAGATGTTCAAGCGGGCCC AGCTCAACTTCTTCCGCGCCTCGCACGATGCCGTCAAGGACATGTCCATC AAGGACCCCAAGGTGGTGGCTGCGGAGATGGAGTCCATCGGCAAGGAGGG TATGTCCCGTCCGGGCAACGTGTCTGCCTTCAGCACCGAGGGAAGCGGCG GCGGCGGCGGTGGTGGCGGTGGCGGAGGCGGCGGCGGAGGCGACGACTCT CCCCCCGGCGACCATGCCGGCGCCTCCCACCCCCCGTACAACCCTGCCGC CACCGCCCCCTGGATGTCCACTGCCGGGGGTGGGGGCGGGGGCGGCGGCG GGGGCGGGGGCGAGGGCGGAGGCGGAGGCGGGCAATGGTGGGACTCCCAT GCGCAGACGGCAGACACGCAGCCAGCCGCGGGCTTTGGCGGCGGCGGCGG GAGCTTCTCGGGGAACCCATTCGCCAGCGGAGGCGCGGTGGTGGCTGCGG AGATGGAGTCCATCGGCAAGGAGGGTATGTCCCGTCCGGGCAACGTGTCT GCCTTCAGCACCGAGGGAAGCGGCGGCGGCGGCGGTGGTGGCGGTGGCGG AGGCGGCGGCGGAGGCGACGACTCTCCCCCCGGCGACCATGCCGGCGCCT CCCACCCCCCGTACAACCCTGCCGCCACCGCCCCCTGGATGTCCACTGCC GGGGGTGGGGGCGGGGGCGGCGGCGGGGGCGGGGGCGAGGGCGGAGGCGG AGGCGGGCAATGGTGGGACTCCCATGCGCAGACGGCAGACACGCAGCCAG CCGCGGGCTTTGGCGGCGGCGGCGGGAGCTTCTCGGGGAACCCATTCGCC AGCGGAGGCGCGGCGCCGCCCCCGCCGCCGGCGCCGGTGCAGCGCGCGCG CGCCCTGTACAGCTACGCGGCGACGGACGCGACGGAGATCTCTCTTGCGG CCAACGAGGTGATCACCGTGCTAGCCAAGGACAAGAGCGGCTGGTGGACG GGCGAGAAGGGCGGCCAGAAGGGCCTCTTCCCCTCCAACTACGTCGAGCT CATGTGAGCGCCGCCCCCGCCGCCGGCGCCGGTGCAGCGCGCGCGCGCCC TGTACAGCTACGCGGCGACGGACGCGACGGAGATCTCTCTTGCGGCCAAC GAGGTGATCACCGTGCTAGCCAAGGACAAGAGCGGCTGGTGGACGGGCGA GAAGGGCGGCCAGAAGGGCCTCTTCCCCTCCAACTACGTCGAGCTCATGT GA back to top
|