mRNA_S-ischiensis_contig1.1046.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A817E4P0_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817E4P0_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 1.960e-7 Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 2
Query: 299 YPSHRPRPPPAQVLD---------SIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
+P+ P PP+ L+ SIQSL+ V EP+FN+P +E RDTA G SLEY+A++R AT++ A+ +
Sbjct: 59 FPNEYPTTPPSIYLETTGNHTVIVSIQSLIFVPEPYFNQPGYERTRDTATGTAQSLEYDANIRQATVRSAMLE 131
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A814XCT8_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814XCT8_9BILA) HSP 1 Score: 64.3 bits (155), Expect = 2.230e-7 Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
QVL SIQSL+ V+EP+FNEP +E MR T GN SLEY+A++R AT++ A+ +
Sbjct: 151 QVLVSIQSLIFVSEPYFNEPGYERMRGTPNGNTQSLEYDANIRQATVRWAMLE 203
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A814SS62_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814SS62_9BILA) HSP 1 Score: 64.3 bits (155), Expect = 3.640e-7 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
QVL SIQSL+ V+EP+FNEP +E MR T+ GN SLEY+A++R AT++ A+ +
Sbjct: 151 QVLVSIQSLIFVSEPYFNEPGYERMRGTSNGNIQSLEYDANIRQATVRWAMLE 203
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A820A150_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820A150_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 4.790e-7 Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 2
Query: 299 YPSHRPRPPPAQVLD---------SIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
+P+ P PP+ L+ SIQSL+ V EP+FN+P +E RDTA G SLEY+A++R AT++ A+ +
Sbjct: 104 FPNEYPTTPPSIYLETTGNHTVIVSIQSLIFVPEPYFNQPGYERTRDTATGTAQSLEYDANIRQATVRSAMLE 176
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: UPI001E1E162A (baculoviral IAP repeat-containing protein 6-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E162A) HSP 1 Score: 63.2 bits (152), Expect = 9.870e-7 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
QVL SIQSL+LV EP+FNEP +E R T GN +S EY+A++R AT++ A+ +
Sbjct: 4745 QVLVSIQSLILVCEPYFNEPGYERSRGTPSGNASSREYDANIRQATVKWAILE 4797
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A6V7L1C5_9HYME (UBC core domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7L1C5_9HYME) HSP 1 Score: 55.8 bits (133), Expect = 1.200e-6 Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 2
Query: 335 VLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAV 484
VL SIQSL+LV EP+FNEP +E R T+ G +S EYNA+V AT++ A+
Sbjct: 1 VLVSIQSLILVPEPYFNEPGYERSRGTSSGAQSSQEYNANVCLATVKWAM 50
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: I0YLH9_COCSC (UBC-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLH9_COCSC) HSP 1 Score: 58.9 bits (141), Expect = 1.260e-6 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAV 484
QVL SIQS++LV +P+FNEP +E R+T G S YNA++R ATL+ AV
Sbjct: 78 QVLVSIQSMILVEDPYFNEPGYESSRNTPSGKQHSNSYNANIRRATLEHAV 128
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A8J5DMB4_9CHEL (Baculoviral IAP repeat-containing protein 6 n=3 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5DMB4_9CHEL) HSP 1 Score: 62.8 bits (151), Expect = 1.300e-6 Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
QVL SIQSL+LVA+P+FNEP +E R T GN +S EY+A++R AT++ A+ +
Sbjct: 4633 QVLVSIQSLILVADPYFNEPGYERSRGTQSGNQSSREYDANIRQATVKWAILE 4685
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: UPI00114292AF (baculoviral IAP repeat-containing protein 6-like n=1 Tax=Formica exsecta TaxID=72781 RepID=UPI00114292AF) HSP 1 Score: 57.4 bits (137), Expect = 1.320e-6 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAV 484
QVL SIQSL+LV+EP+FNEP +E R T+ G +S EYNA++ AT + A+
Sbjct: 50 QVLVSIQSLILVSEPYFNEPGYERSRGTSSGAQSSQEYNANICQATAKWAM 100
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Match: A0A8J1XVH7_OWEFU (Ofus.G091083 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XVH7_OWEFU) HSP 1 Score: 62.4 bits (150), Expect = 1.720e-6 Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 2
Query: 332 QVLDSIQSLVLVAEPFFNEPVFEGMRDTAEGNGTSLEYNAHVRAATLQLAVAQ 490
QVL SIQSL+LV+EP+FNEP +E R T GN +S EY+A++R AT++ A+ +
Sbjct: 4839 QVLVSIQSLILVSEPYFNEPGYERSRGTPTGNASSREYDANIRQATVKWAMLE 4891 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1046.1 >prot_S-ischiensis_contig1.1046.1 ID=prot_S-ischiensis_contig1.1046.1|Name=mRNA_S-ischiensis_contig1.1046.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=261bp MRDTAEGNGTSLEYNAHVRAATLQLAVAQGAGEQKEPLLHGGQETLPPHQback to top mRNA from alignment at S-ischiensis_contig1:7227396..7230457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1046.1 ID=mRNA_S-ischiensis_contig1.1046.1|Name=mRNA_S-ischiensis_contig1.1046.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3062bp|location=Sequence derived from alignment at S-ischiensis_contig1:7227396..7230457+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:7227396..7230457+ >mRNA_S-ischiensis_contig1.1046.1 ID=mRNA_S-ischiensis_contig1.1046.1|Name=mRNA_S-ischiensis_contig1.1046.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1566bp|location=Sequence derived from alignment at S-ischiensis_contig1:7227396..7230457+ (Schizocladia ischiensis KU_0333)back to top |