mRNA_S-dermatodea_contig10734.500.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: D7FTT1_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTT1_ECTSI) HSP 1 Score: 261 bits (666), Expect = 4.980e-79 Identity = 131/148 (88.51%), Postives = 142/148 (95.95%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKV 444
TGKTLIAKACAGEAGVPFLYACGS+FNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEID+LGR+R G+RDA ATQDREATLNQLLSEMDGFEGKDGIVVMASTNRK++LD+ALLRSGRFDMQVDV+RPDR GR+QLFSKY+ PLK+
Sbjct: 470 TGKTLIAKACAGEAGVPFLYACGSEFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDHLGRARG-GSRDAGSATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKDMLDDALLRSGRFDMQVDVDRPDRKGREQLFSKYLAPLKL 616
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A0A2K3MBW5_TRIPR (ATP-dependent zinc metalloprotease ftsh mitochondrial-like (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MBW5_TRIPR) HSP 1 Score: 161 bits (407), Expect = 1.660e-47 Identity = 84/143 (58.74%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYI 429
TGKTL+AKA AGEAGVPFL GSDF +YVG+G + V+ LF +A+K SI++IDEID +GR+R G D+S A +RE+TLNQLL EMDGF G+VV+A TNR +ILD+ALLR GRFD Q+ V++PD GR Q+F Y+
Sbjct: 48 TGKTLLAKAAAGEAGVPFLSLSGSDFLELYVGVGCSRVRNLFYEAKKCAPSIVFIDEIDAIGRARGHG--DSSAAQNERESTLNQLLVEMDGFGTTAGVVVLACTNRPDILDKALLRPGRFDRQITVDKPDIKGRDQIFQIYL 188
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A0A830C642_9LAMI (ATP-dependent zinc metalloprotease ftsh 8 mitochondrial n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A830C642_9LAMI) HSP 1 Score: 162 bits (409), Expect = 4.300e-47 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKV 444
TGKTL+AKA AGE+GVPFL GSDF ++VG+G + V+ LF +AR+ K SII+IDEID +GR+R G SG+ +RE+TLNQLL EMDGF G+VV+A TNR +ILD+ALLR GRFD Q +++PD GR Q+F Y+ +K+
Sbjct: 32 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQSKPSIIFIDEIDAIGRARGRGG--FSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQXXIDKPDIKGRDQIFQVYLKKIKL 177
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A9U326_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U326_PHYPA) HSP 1 Score: 167 bits (424), Expect = 9.880e-46 Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKVKQN 453
TGKTL+AKA AGEAGVPFL GSDF ++VG+G + V+ LFA+AR+ SII+IDEID +GR+R G +GA +RE+TLNQLL EMDGF G+VV+A TNR +ILD+ALLR GRFD Q+ ++RPD GR+Q+F Y+ LK+ Q+
Sbjct: 236 TGKTLLAKATAGEAGVPFLSISGSDFMEMFVGVGPSRVRDLFAQARQSSPSIIFIDEIDAIGRARGRGG--FAGANDERESTLNQLLVEMDGFGTTTGVVVLAGTNRPDILDKALLRPGRFDRQISIDRPDINGREQIFRIYLEKLKLDQD 384
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A0A7S2Z3U7_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z3U7_9CHLO) HSP 1 Score: 164 bits (414), Expect = 9.950e-46 Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKVKQ 450
TGKTL+AKA AGE+GVPFL GSDF ++VG+G A V+ LFAKAR SII+IDEID +GR R G G +RE TLNQLL EMDGF G+V++A TNR +ILD+ALLR GRFD Q+ ++RPD GR+Q+F+ ++ +K+++
Sbjct: 2 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPARVRDLFAKARSQSPSIIFIDEIDAIGRQRGRGGM---GGNDERENTLNQLLVEMDGFATTSGVVILAGTNRPDILDKALLRPGRFDRQISLDRPDINGREQIFNVHLAKIKIEK 148
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: UPI001E69745C (LOW QUALITY PROTEIN: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69745C) HSP 1 Score: 164 bits (416), Expect = 1.030e-45 Identity = 84/148 (56.76%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKV 444
TGKTL+AKA AGEAGV FL GSDF +YVG+G + V+ LF +A+K SI++IDEI+ +GR+R G D+SGA +RE+TLNQLL EMDGF G+VV+A TNR +ILD+ALLR GRFD Q+ V++PD GR Q+F Y+ +K+
Sbjct: 71 TGKTLLAKAAAGEAGVSFLSLSGSDFLELYVGVGCSRVRNLFYEAKKCAPSIVFIDEIEAIGRARGHGHGDSSGAQNERESTLNQLLVEMDGFGTTAGVVVLACTNRPDILDKALLRPGRFDRQITVDKPDIKGRDQIFQIYLKKIKL 218
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A0A5B6ZQS0_DAVIN (Putative FTSH protease 10 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZQS0_DAVIN) HSP 1 Score: 159 bits (401), Expect = 1.050e-45 Identity = 82/148 (55.41%), Postives = 108/148 (72.97%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKV 444
TGKTL+AKA AGE+ VPFL GSDF ++VG+G + V+ LF +AR+ SII+IDEID +GR+R G SG +RE+TLNQLL EMDGF GIVV+A TNR +ILD+ALLR GRFD Q+ +++PD GR+Q+F Y+ +K+
Sbjct: 91 TGKTLLAKATAGESSVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGG--FSGGNDERESTLNQLLVEMDGFGTTSGIVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGREQIFQIYLKKIKL 236
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A0A446J500_TRITD (AAA domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446J500_TRITD) HSP 1 Score: 160 bits (406), Expect = 1.150e-45 Identity = 82/148 (55.41%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKV 444
TGKTL+AKA AGE+GVPF+ GSDF ++VG+G + V+ LF +AR+ SI++IDEID +GR+R G SG+ +RE+TLNQLL EMDGF G+VV+A TNR +ILD+ALLR GRFD Q+ +++PD GR Q+F Y+T LK+
Sbjct: 32 TGKTLLAKATAGESGVPFMSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIVFIDEIDAIGRARGRGG--FSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLTKLKL 177
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A4SB10_OSTLU (AAA domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SB10_OSTLU) HSP 1 Score: 163 bits (413), Expect = 2.290e-45 Identity = 84/146 (57.53%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPL 438
TGKTL+AKA AGEAGVPFL GSDF ++VG+G + V+ LFA+AR+ K SII+IDEID +GR R G +G +RE TLNQLL EMDGF K+G++V+A TNR +ILD ALLR GRFD Q+ V+RPD GR+Q+F ++ +
Sbjct: 32 TGKTLLAKATAGEAGVPFLSISGSDFMEMFVGVGPSRVRDLFAQARQQKPSIIFIDEIDAIGRQRGRGG--FAGGNDERENTLNQLLVEMDGFGTKEGVIVLAGTNRPDILDRALLRPGRFDRQITVDRPDIQGREQIFRVHLAKI 175
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Match: A0A446NWA9_TRITD (AAA domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446NWA9_TRITD) HSP 1 Score: 159 bits (403), Expect = 2.350e-45 Identity = 83/148 (56.08%), Postives = 108/148 (72.97%), Query Frame = 1
Query: 1 TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKSIIYIDEIDYLGRSRNSGARDASGATQDREATLNQLLSEMDGFEGKDGIVVMASTNRKEILDEALLRSGRFDMQVDVERPDRTGRQQLFSKYITPLKV 444
TGKTL+AKA AGE+GVPFL GSDF ++VG+G + V+ LF +AR+ SI++IDEID +GR+R G SG +RE TLNQLL EMDGF G+VV+A TNR +ILD+ALLR GRFD Q+ ++RPD GR+Q+F Y+ LK+
Sbjct: 32 TGKTLLAKATAGESGVPFLSISGSDFLEMFVGVGPSRVRGLFQEARECAPSIVFIDEIDAIGRARGRGGY--SGGNSERENTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQISIDRPDINGREQIFRIYLAKLKL 177 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10734.500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10734.500.1 >prot_S-dermatodea_contig10734.500.1 ID=prot_S-dermatodea_contig10734.500.1|Name=mRNA_S-dermatodea_contig10734.500.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=155bp TGKTLIAKACAGEAGVPFLYACGSDFNGVYVGMGVAAVKRLFAKARKHKKback to top mRNA from alignment at S-dermatodea_contig10734:2138..7918+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10734.500.1 ID=mRNA_S-dermatodea_contig10734.500.1|Name=mRNA_S-dermatodea_contig10734.500.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5781bp|location=Sequence derived from alignment at S-dermatodea_contig10734:2138..7918+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10734:2138..7918+ >mRNA_S-dermatodea_contig10734.500.1 ID=mRNA_S-dermatodea_contig10734.500.1|Name=mRNA_S-dermatodea_contig10734.500.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at S-dermatodea_contig10734:2138..7918+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |