mRNA_S-dermatodea_contig10714.493.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: D8LQ31_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ31_ECTSI) HSP 1 Score: 206 bits (523), Expect = 9.650e-63 Identity = 101/126 (80.16%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 1 MSTRADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
MS+RADWVSY YYVG+LKISEDKYK+AEVDLE AL+HCH A+ NKRRILN LVPLRLRLG YP +LL KY L HF DF+ AIRTGDVRSFN LM++WERVFI+KGTYLLMEKCLMLVYRNLVKK
Sbjct: 217 MSSRADWVSYRYYVGVLKISEDKYKDAEVDLEAALRHCHNKARGNKRRILNKLVPLRLRLGLYPTLDLLVKYDLAHFHDFAVAIRTGDVRSFNELMTQWERVFISKGTYLLMEKCLMLVYRNLVKK 342
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A7S2UR90_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR90_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.000e-32 Identity = 63/124 (50.81%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 7 TRADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
T D V++ YYVG L + EDKY AE +L+ AL HCHR+A +NK+RIL LVP++L+ G+ P LL KY L F+ IRTGD+R+FN ++K++ +FI +GTYLL+EKC + YRNL K+
Sbjct: 212 TMGDMVTFRYYVGRLNMFEDKYDVAEENLDYALLHCHRNAVANKKRILKYLVPVKLKRGRLPTKLLLTKYSLYEFIPLVEGIRTGDLRTFNDGLAKYQDMFIRRGTYLLLEKCKAICYRNLFKR 335
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A7S4VAP4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAP4_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.590e-32 Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 10 RADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
+ D V+Y YYVG L + ED+Y AE L+ ALKHC+R A+ NK+RILN L+P++L G+ P LL KY L F+ IRTGD+R+FN + K++ +FI +GTYLL+EKC + YRNL K+
Sbjct: 76 KGDKVTYRYYVGRLAMFEDQYDVAEEHLDYALKHCYRGARGNKKRILNYLLPVKLLRGRLPTQYLLQKYSLHEFIPLVHGIRTGDLRTFNDGLQKYQDLFIRRGTYLLLEKCKTVCYRNLFKR 198
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A6U3NR12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NR12_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.300e-31 Identity = 62/123 (50.41%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 10 RADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
+ D V+Y YYVG L + ED+Y AE L+ ALKHC+R A+ NK+RILN L+P++L G+ P LL KY L F+ IRTGD+R+FN + K++ +FI +GTYLL+EKC + YRNL K+
Sbjct: 219 KGDKVTYRYYVGRLAMFEDQYDVAEEHLDYALKHCYRGARGNKKRILNYLLPVKLLRGRLPTQYLLQKYSLHEFIPLVHGIRTGDLRTFNDGLQKYQDLFIRRGTYLLLEKCKTVCYRNLFKR 341
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A7S4HIK1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HIK1_9STRA) HSP 1 Score: 122 bits (307), Expect = 5.330e-31 Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 16 DWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
+ V+Y YYVG L + ED Y+ AE++L+ AL+HCH +A+ NKRRILN L+P++L G+ P LL K+ L F IRTGD+R+FN + K++ +FI +GTYLL+EKC + YRNL K+
Sbjct: 189 EMVTYRYYVGRLSMFEDNYEGAEMNLDYALRHCHVNARRNKRRILNYLLPVKLLRGRLPTQRLLTKHNLKEFEPLVEGIRTGDLRTFNDGLRKYQDLFIRRGTYLLLEKCKTVCYRNLFKR 309
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A7S2SLH5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SLH5_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.630e-30 Identity = 59/124 (47.58%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 7 TRADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
T + V+Y YYVG L + ED+Y+ AE +L+ AL HCH+ A NKR+ILN L+P++L G+ P LL KY L F+ IR GD+R+F+ + K++ +FI +GTYLL+EKC + YRNL K+
Sbjct: 39 TMGEMVTYRYYVGRLNMFEDQYETAEANLDYALCHCHKAAIGNKRKILNYLLPVKLLRGRLPTKLLLEKYSLYEFIPLVEGIRKGDLRTFSDGLLKYQDLFIRRGTYLLLEKCKTVCYRNLFKR 162
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A1E7FX04_9STRA (PCI domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX04_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.420e-30 Identity = 58/124 (46.77%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 7 TRADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
T A+ ++Y YY+G L + ED+++ AE L+ AL+HCH+DA NKRRIL LVP++L G+ P LL KY L F IR GD+R+F + +++ FI +GTYLL+EKC + YRNL K+
Sbjct: 28 TMAEMITYRYYIGRLNMFEDQHESAETHLDYALQHCHKDAIKNKRRILKYLVPIKLYRGRLPTTLLLDKYGLEEFKPIVEGIRKGDLRTFQDGLVRYQDTFIRQGTYLLLEKCKTVCYRNLFKR 151
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: B8BTT3_THAPS (PCI domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTT3_THAPS) HSP 1 Score: 117 bits (293), Expect = 3.950e-30 Identity = 57/126 (45.24%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 1 MSTRADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
M T + V+Y++Y G L + ED+Y+ AE + + AL HCHR+A NK+RILN LVP+++ G+ P +LL KY L FL +RTG++ F+ +++ + +FI +GTYLL+EKC M+ YRNL K+
Sbjct: 45 MGTMGEMVTYNFYCGRLNMFEDQYELAEENFDYALLHCHRNAVGNKKRILNYLVPVKMLRGRLPTAKLLQKYSLDEFLPLLNGMRTGNLMEFSNGLTQNQDLFIRRGTYLLLEKCKMICYRNLFKR 170
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A448ZKJ1_9STRA (PCI domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKJ1_9STRA) HSP 1 Score: 120 bits (300), Expect = 8.640e-30 Identity = 62/122 (50.82%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 13 ADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
A+ V+Y YYVG L + ED + AE +LE AL HCHRDA +NK+RIL LVP++L GK+P LL KY L F +R GD+R+F + K++ FI +GTYLL+EKC +VYRNL K+
Sbjct: 218 AEMVTYTYYVGRLSMFEDDHARAETNLEYALAHCHRDATNNKKRILKYLVPVKLYRGKFPTTRLLDKYGLEEFKPLVEGMRKGDLRTFQDGLVKYQDRFIGQGTYLLLEKCKTVVYRNLFKR 339
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Match: A0A7S2AAW0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAW0_TRICV) HSP 1 Score: 116 bits (291), Expect = 1.340e-29 Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 16 DWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILNNLVPLRLRLGKYPRPELLAKYKLTHFLDFSTAIRTGDVRSFNTLMSKWERVFITKGTYLLMEKCLMLVYRNLVKK 378
+ V+Y YYVG L + ED+Y+ AE +L+ AL+HCH +A N+RRILN L+P++L G+ P LL KY L F IRTGD+R+FN + + + +FI +GTYLL+EKC + YRNL K+
Sbjct: 91 EMVTYRYYVGRLGMFEDQYEAAEKNLDYALRHCHVNAPRNRRRILNYLLPVKLLRGRLPTDLLLRKYDLREFEPLVRGIRTGDLRTFNEGLRRHQDLFIRRGTYLLLEKCKTVCYRNLFKR 211 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10714.493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10714.493.1 >prot_S-dermatodea_contig10714.493.1 ID=prot_S-dermatodea_contig10714.493.1|Name=mRNA_S-dermatodea_contig10714.493.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=128bp MSTRADWVSYHYYVGLLKISEDKYKEAEVDLEMALKHCHRDAKSNKRRILback to top mRNA from alignment at S-dermatodea_contig10714:935..2566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10714.493.1 ID=mRNA_S-dermatodea_contig10714.493.1|Name=mRNA_S-dermatodea_contig10714.493.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1632bp|location=Sequence derived from alignment at S-dermatodea_contig10714:935..2566- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10714:935..2566- >mRNA_S-dermatodea_contig10714.493.1 ID=mRNA_S-dermatodea_contig10714.493.1|Name=mRNA_S-dermatodea_contig10714.493.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at S-dermatodea_contig10714:935..2566- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |