mRNA_S-dermatodea_contig107.480.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: D7FSS7_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS7_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.100e-95 Identity = 219/528 (41.48%), Postives = 267/528 (50.57%), Query Frame = 1
Query: 1 QDQLNEATEICGAILLKAPGNARAHYLLGGIAQRSGRGRDAADHALTAARLRPDLPSLQLAAGALLYRAKAYGEALALYEAAIEKDPETARYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AAFWLPATRKLSGGDYVGAASQGNTEGSKHGLSR-EGVDGIGPPPPTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRRLCRESRSETVAS-----------REWDAPISKEEDGGAV----------------------------NPSRDTDLDPPTEGAAR----DRPVSTANAVLGAVRNEQ----DLVLSCDVFVYIGDLRACFDAVRELM--------------RSVSGDEDGAIFAFSAEASPPIPPTAAERESAEEDNEGGSSPSCSGLGLTGYELAGTGR 1374
+D+L+EA E+C A+L AP NAR YL +QR+GR ++ A+ A AARLRPDLPS+QL AG+LL R K +G ALA+YE A++ P +YH AAFWLPATRKL+ G G G + + P +APREYVVGLYNSYAETFDSHLQGAL YRTPTVIVE L LFPGRR W RCLDLGCGTGLSG+AAS++C RLVGVDLSPAMV AREKRVY RLLVG+VT+TVRRL SRSE+ + W+ P EE+GGA + + +L PPTE A P+ T + G ++ DL+LSCDVFVYIGDLRACF+AVREL+ R ++ A+FAFSAEA PP A + + + ++PS GYEL GTGR
Sbjct: 17 EDKLDEAAELCSAVLRSAPRNARGLYLRAVASQRAGRPKEGAEDACQAARLRPDLPSVQLMAGSLLCRNKCFGRALAVYEKALDVSPGNVQYHLGAASALRQLGRGDQATAAFLTAASAAASADVGTQAQVQYKLGQHLRSMGDAVYFAQAAQAYARCLELDRGHVLAAFWLPATRKLAASTLREPHDGGYVAGPGEGSAAVDNAMETPASPASAPREYVVGLYNSYAETFDSHLQGALEYRTPTVIVENLRRLFPGRR--WDRCLDLGCGTGLSGRAASSVCRRLVGVDLSPAMVLRAREKRVYHRLLVGEVTETVRRLS--SRSESASEPGAGLSARHPRARWEVPAMAEEEGGAAVAAVAVGGCGDGGGTGQMLPGTTVAGEASVEDEGELVPPTEVATLATLPSAPIVTGSGSCGGSSSDGIGGGDLILSCDVFVYIGDLRACFEAVRELVAGDQASAESETDAGRDPRREKPAAVFAFSAEAPPPEAADAGDSGAEKRTTADAANPSH-----RGYELQGTGR 535
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: A0A6H5L3S1_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S1_9PHAE) HSP 1 Score: 303 bits (776), Expect = 2.230e-93 Identity = 223/536 (41.60%), Postives = 266/536 (49.63%), Query Frame = 1
Query: 1 QDQLNEATEICGAILLKAPGNARAHYLLGGIAQRSGRGRDAADHALTAARLRPDLPSLQLAAGALLYRAKAYGEALALYEAAIEKDPETARYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AAFWLPATRKLSGGDYVGAASQGNTEGSKHGLSREGVDGIGPPPPT---APREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRRLCR--ESRSETVASRE-------WDAPISKEEDGGAV-------------------------NPSRDTDLDPPTEGAARD---------------RPVSTANAVLGAVRNEQ----DLVLSCDVFVYIGDLRACFDAVRELM--------------RSVSGDEDGAIFAFSAEASPPIPPTAAERESAEEDNEGGSSPSCSGLGLTGYELAGTGR 1374
+D+L+EA E+C A+L AP NAR YL +QR+GR ++AA+ A AARLRPDLPS+QL AG+LL R K +G ALA+YE A++ P +YH AAFWLPATRKL+ A GS G + VD P T APREYVVGLYNSYAETFDSHLQGAL YRTPTVIVE L LFP RR W RCLDLGCGTGLSG+AAS++C RLVGVDLSPAMVR AREKRVY RLLVG+VT+TVRRL R ES SE A W+ P EE+GGA + D++ P G+ R+ P+ T++ G + DL+LSCDVFVYIGDLRACF+AVR L+ R +E A+FAFSAEA P A + + + PS GYEL GTGR
Sbjct: 17 EDKLDEAAELCSAVLRSAPRNARGLYLRAVASQRAGRPKEAAEDACQAARLRPDLPSVQLMAGSLLCRNKCFGRALAVYEKALDASPGNVQYHLGAASALRQLGRGDHATAAFLAAASAAASADVGTQAQVQYKLGQHLRSMGDAASLAQAAQAYARCLELDPGHVLAAFWLPATRKLAASTLREAHDGVYVAGS--GEASVAVDNAMETPATPASAPREYVVGLYNSYAETFDSHLQGALEYRTPTVIVENLRRLFPERR--WDRCLDLGCGTGLSGRAASSVCRRLVGVDLSPAMVRRAREKRVYHRLLVGEVTETVRRLSRRSESPSEPGAGSSPRRRRARWEVPAMVEEEGGAAVAAMAVGGCGDGNGIDQMLPGTTVAEEASVEDVESPAAGSKRELAQPTEVTTLATLQSAPIETSSGTCGGTSSGGIDGGDLILSCDVFVYIGDLRACFEAVRGLVAGYQASAESETEAGRDPRREEPAAVFAFSAEAPPSEATDAGDSGGEKRTTADAADPSH-----RGYELQGTGR 543
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: A0A835Z4Q9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q9_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.000e-23 Identity = 83/213 (38.97%), Postives = 99/213 (46.48%), Query Frame = 1
Query: 610 PTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREK--RVYQRLLVGDVTDTVRRLCRESRSETVASREWDAPISKEEDGGAVNPSRDTDLDPPTEGAARDRPVSTANAVLGAVRNEQDLVLSCDVFVYIGDLRACFDAVRELMRSVSGDEDGAIFAFS 1242
P PREY+ LY+ YA F+ HL L Y+T ++VE L PGR W RC+DLGCGTGLSG A + L GVDLS M+ AR K VY RL+VG+ + + L TDL TEG GA R DL LSCDVFVYIGDL+ CF A+ GA+ AFS
Sbjct: 89 PAPPREYIEKLYDGYAAKFEEHLTKGLQYKTHELLVEALVKALPGR--LWARCVDLGCGTGLSGVTARPHVEHLTGVDLSKNMIAQARAKGTAVYNRLIVGECAEALMDL-------------------------------GTDLG--TEGGK------------GAERF--DLFLSCDVFVYIGDLQPCFTAMAATAAP------GAVIAFS 246
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: UPI001994DC82 (Methyltransferase domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI001994DC82) HSP 1 Score: 104 bits (259), Expect = 6.080e-21 Identity = 77/220 (35.00%), Postives = 96/220 (43.64%), Query Frame = 1
Query: 592 GIGPPPPT-APREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRRLCRESRSETVASREWDAPISKEEDGGAVNPSRDTDLDPPTEGAARDRPVSTANAVLGAVRNEQDLVLSCDVFVYIGDLRACFDAVRELMRSVSGDEDGAIFAFSAE 1248
G P PT APR YV L++ YA F+ H+ L YR V+ ++LA L PGR + LDLGCGTGL G +CDRL GVDLS M+ A+ VY L+ DVT+ LC TD DLVL+ DVF+Y+GDL A F+AV LM + G +F FS E
Sbjct: 155 GAAPQSPTGAPRAYVEALFDGYAGQFEQHVVQVLGYRAHEVLTQSLAALHPGR---FSSALDLGCGTGLCGPLLKPLCDRLAGVDLSAQMLARAQALGVYDSLMHADVTE---HLCH------------------------------TD-------------------------ERHDLVLAADVFIYVGDLSAVFEAVSALM------DPGGLFCFSVE 307
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: A0A5M8P741_9HYPH (S-adenosylmethionine-dependent methyltransferase n=1 Tax=Candidatus Tokpelaia sp. TaxID=2233777 RepID=A0A5M8P741_9HYPH) HSP 1 Score: 102 bits (253), Expect = 9.760e-21 Identity = 70/231 (30.30%), Postives = 102/231 (44.16%), Query Frame = 1
Query: 592 GIGPPPPTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRRLCRESRSETVASREWDAPISKEEDGGAVNPSRDTDLDPPTEGAARDRPVSTANAVLGAVRNEQDLVLSCDVFVYIGDLRACFDAVRELMRSVSGDEDGAIFAFSAEASPPIPPTAAER 1284
G+G P TAP Y+ L++ YA+ FD L +L Y P ++ E ++ +PGR +K LDLGCGTGL G+A A+ D+ GVDLS MV +A E+ +Y RL GD++ +R R+ ++W DL+++ DV YIGDL F V + +FAFS+E I P A ++
Sbjct: 54 GLGAVPKTAPPAYIGALFDQYADVFDMILVDSLGYNVPNLLCERISAHYPGRY--FKNLLDLGCGTGLVGEAFIALADKKTGVDLSQNMVEIAHEREIYHRLFTGDISRFLREKSRQ--------QQW------------------------------------------------DLIIAADVLPYIGDLHEFFSLVSRALAK------NGVFAFSSENMEKIKPHAGQQ 220
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: A0A538Q747_9DELT (Tetratricopeptide repeat protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538Q747_9DELT) HSP 1 Score: 100 bits (248), Expect = 1.980e-19 Identity = 75/226 (33.19%), Postives = 96/226 (42.48%), Query Frame = 1
Query: 571 LSREGVDGIGPPPPTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRRLCRESRSETVASREWDAPISKEEDGGAVNPSRDTDLDPPTEGAARDRPVSTANAVLGAVRNEQDLVLSCDVFVYIGDLRACFDAVRELMRSVSGDEDGAIFAFSAE 1248
LS E VD TAP +YV L++SYA F+ HL ALAY+ P + +A + P RR W LDLGCG+GL G A L+G DLSP M+ +AR + VY +L V D+ T+ R R + DL L+ DVFVY+G L A FDA +R G +FAFS E
Sbjct: 158 LSGEHVD-------TAPADYVTELFDSYAPRFEDHLVNALAYQAPERLAALVAAIHPPRRD-W-HILDLGCGSGLGGVAFRDFARHLIGSDLSPRMIDIARRRGVYDQLFVEDLLATLHR----------------------------------------------------------ARGDVDLALAADVFVYVGALDAAFDAACHALRP------GGLFAFSTE 310
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: A0A525IM44_BRASZ (Methyltransferase domain-containing protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525IM44_BRASZ) HSP 1 Score: 97.1 bits (240), Expect = 4.470e-19 Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 532 AASQGNTEGSKHGLSREGVDGIGPPPPTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRR 930
AA G+ +G+ L+ G D P+A YV L++ YA F+ HL LAYR P +I+ET+ PGRR A R LDLGCGTGL+G+A + D L GVDLS AM+ AR + +Y L G++ D +RR
Sbjct: 41 AADPGDAQGAAARLALLGEDDAARGLPSA---YVARLFDDYAPRFERHLTQDLAYRGPALILETIEAAAPGRRFA--RSLDLGCGTGLAGEALRSRVDWLEGVDLSSAMLAKARRRALYDALGEGEIVDRLRR 168
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: UPI001BC1556F (Tetratricopeptide repeat protein n=1 Tax=Hydrogenophaga sp. TaxID=1904254 RepID=UPI001BC1556F) HSP 1 Score: 99.0 bits (245), Expect = 5.460e-19 Identity = 73/216 (33.80%), Postives = 89/216 (41.20%), Query Frame = 1
Query: 607 PPTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQ--AWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVRRLCRESRSETVASREWDAPISKEEDGGAVNPSRDTDLDPPTEGAARDRPVSTANAVLGAVRNEQDLVLSCDVFVYIGDLRACFDAVRELMRSVSGDEDGAIFAFSAE 1248
P AP YV GL++ YA+ FD HL G L Y TLA P R+ ++ LDLGCGTGL G DRL GVDL+P M+ AR + VY L+ GDV + +R P R DLVLS DVF+YIGDL F+ V +M G +F FSAE
Sbjct: 179 PAAAPGHYVQGLFDDYADDFDQHLVGVLNYSAH----RTLAAPLPALREDGRYRSALDLGCGTGLCGPQVRPFTDRLTGVDLAPRMLEKARTRGVYDELVAGDVVEHLRH----------------------------TPQR------------------------------HDLVLSADVFIYIGDLAPVFEGVARVMGP------GGVFCFSAE 326
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: A0A1M7S0H5_9RHOB (Predicted methyltransferase, contains TPR repeat n=1 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7S0H5_9RHOB) HSP 1 Score: 97.4 bits (241), Expect = 6.660e-19 Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 604 PPPTAPREYVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTDTVR 927
PPP AP YV L++ +AE FD+ L GAL+YR P ++ + L L PG + R LDLGCGTGL+G+A +C R+ GVDLS M+ LA E+ Y L +G+ + +R
Sbjct: 91 PPPGAPPAYVETLFDQHAEIFDAALVGALSYRAPMLLRDRLERLAPG---PYARMLDLGCGTGLAGEALRDLCARIDGVDLSAGMLELADERGAYDELYMGEAVEFLR 195
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Match: UPI000429F758 (methyltransferase domain-containing protein n=1 Tax=Salinarimonas rosea TaxID=552063 RepID=UPI000429F758) HSP 1 Score: 96.7 bits (239), Expect = 1.530e-18 Identity = 52/97 (53.61%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 628 YVVGLYNSYAETFDSHLQGALAYRTPTVIVETLATLFPGRRQAWKRCLDLGCGTGLSGQAASAICDRLVGVDLSPAMVRLAREKRVYQRLLVGDVTD 918
YV L+++YAE FD HL G L YR P + + L PGRR A R LDLGCGTGL G+A +RL G DL+PAMV AREK VY L V ++TD
Sbjct: 120 YVRALFDTYAERFDEHLTGDLGYRGPQCLRDALDRQAPGRRFA--RALDLGCGTGLMGEAIRDRVERLEGCDLAPAMVEKAREKGVYDALAVAELTD 214 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig107.480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig107.480.1 >prot_S-dermatodea_contig107.480.1 ID=prot_S-dermatodea_contig107.480.1|Name=mRNA_S-dermatodea_contig107.480.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=459bp QDQLNEATEICGAILLKAPGNARAHYLLGGIAQRSGRGRDAADHALTAARback to top mRNA from alignment at S-dermatodea_contig107:15901..23219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig107.480.1 ID=mRNA_S-dermatodea_contig107.480.1|Name=mRNA_S-dermatodea_contig107.480.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7319bp|location=Sequence derived from alignment at S-dermatodea_contig107:15901..23219- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig107:15901..23219- >mRNA_S-dermatodea_contig107.480.1 ID=mRNA_S-dermatodea_contig107.480.1|Name=mRNA_S-dermatodea_contig107.480.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2754bp|location=Sequence derived from alignment at S-dermatodea_contig107:15901..23219- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |