prot_S-dermatodea_contig10680.473.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10680.473.1
Unique Nameprot_S-dermatodea_contig10680.473.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length281
Homology
BLAST of mRNA_S-dermatodea_contig10680.473.1 vs. uniprot
Match: D8LL68_ECTSI (Rab geranylgeranyl transferase component A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL68_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 7.900e-94
Identity = 152/276 (55.07%), Postives = 193/276 (69.93%), Query Frame = 0
Query:    7 ARFEDDTDSFMLRRREFCFPGIPPIVLRQEFVSVDGTGGAVWRSSIQFATFVCGEEGKRCLPLAGRSVLEVSSGLGLGAIAAWHLGASPVVATDVDEENGPMALLSYNAVANCSRRLASVKNHG---TSAGGERDGEESCLPLTDIEVDKADGRDTSWAKGDMKQPLH---VRALRWGSSSQLADAMTTFEGFGPDVVLACDVIFDESLLPDLSDTLAGACVLKTREGKRPTLCMSHQRRNRGREGPFFANLSTRLGGGA-WEEVHREDDLSVFIF 275
            A FE DT+SFMLRRR F FPG+PP+VL Q+FVSV+GTGGAVWR SI+F+ FVC EEG+RCLPLAG+SVLE+SSGLGLGAI +W+LGASPVVATD+  ++GPM LL+ N   NC  R  +        TS    R GE      T  +   A+   T               V++LRWG  +QLADA+  F+GFGPDV+LACDV+FD++LLP L +TLA A    TR G RP+LC+SHQ+RNR RE  FFA+L+ R+GGG  +  +H+++DLSVF+F
Sbjct:   20 ACFERDTESFMLRRRRFMFPGLPPVVLNQDFVSVEGTGGAVWRPSIEFSEFVCSEEGRRCLPLAGKSVLEISSGLGLGAIVSWNLGASPVVATDLGSKDGPMTLLARNVSENCGPRAVATPQPSPGRTSRDHSRGGEAG----TSAKGRSAEDEGTPXXXXXXXXXXXXXSVQSLRWGDKAQLADALKKFDGFGPDVLLACDVVFDDALLPPLLETLAEAACRTTRGGGRPSLCVSHQKRNRRREDNFFASLAKRIGGGGQFRMLHQQNDLSVFVF 291          
BLAST of mRNA_S-dermatodea_contig10680.473.1 vs. uniprot
Match: A0A835YQC3_9STRA (Rab geranylgeranyl transferase component A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQC3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 7.610e-20
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 0
Query:   10 EDDTDSFMLRRREFCFPGIP-PIVLRQEFVSVDGTGGAVWRSSIQFATFVCGEEGKRCLPLAGRSVLEVSSGLGLGAIAAWHLGASPVVATDVDEE-NGPMALLSYNAVANC 119
            +D+      R+R F  PGI  P+ + Q+F+ ++GTGG VWR+S+  A + C         +AG  VLE+ +GLGL AIAAWHLGA  VVATD+D + N  +ALL+ N  ANC
Sbjct:   32 DDEVAELTARQRTFILPGIERPLTIIQDFMGIEGTGGTVWRASVMLAEYCCTHLKDA---MAGAPVLEIGAGLGLVAIAAWHLGALQVVATDIDHDGNRLLALLAKNISANC 140          
BLAST of mRNA_S-dermatodea_contig10680.473.1 vs. uniprot
Match: A0A6A5T7B5_9PLEO (Uncharacterized protein n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5T7B5_9PLEO)

HSP 1 Score: 58.5 bits (140), Expect = 2.430e-6
Identity = 52/198 (26.26%), Postives = 82/198 (41.41%), Query Frame = 0
Query:   43 TGGAVWRSSIQFATFVCGEEGKRCLPLAGRSVLEVSSGLGLGAIAAWHLGAS--PVVATDVDEENGPMALLSYNAVANCSRRLASVKNHGTSAGGERDGEESCLPLTDIEVDKADGRDTSWAKGDMKQPLHVRALRWGSSSQLADAMTTFEGFGPDVVLACDVIFDESLLPDLSDTLAGACVLKTREGKRPTLCMSHQ 238
            TG  +W+ +  FA ++  E          +  + +  G G+  I A  LG      VATD D     + LL  N + N   R    K+    +       +S   +  +E+D        W                 S SQL   +   +G G D+V+ACD I++ESL+  L+ T A  C L+  E ++PT+C+  Q
Sbjct:   64 TGAVLWKVTPLFAEWIASENFLSKTGFLRQDSIAIELGTGVSGIVALTLGPKIKHYVATDQDYV---IRLLKQNIIGNLPTRSTKQKSRKKPSNTST---QSTPNIETLELD--------WEAD--------------SVSQLPSLLGVNDGEGVDLVIACDCIYNESLIEPLNTTCAQICNLRASEQRKPTICLVAQ 233          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10680.473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LL68_ECTSI7.900e-9455.07Rab geranylgeranyl transferase component A n=2 Tax... [more]
A0A835YQC3_9STRA7.610e-2046.43Rab geranylgeranyl transferase component A n=1 Tax... [more]
A0A6A5T7B5_9PLEO2.430e-626.26Uncharacterized protein n=1 Tax=Byssothecium circi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019410Lysine methyltransferasePFAMPF10294Methyltransf_16coord: 165..253
e-value: 4.0E-5
score: 23.4
NoneNo IPR availablePANTHERPTHR14614HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGENcoord: 32..270
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 67..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10680contigS-dermatodea_contig10680:3529..5875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10680.473.1mRNA_S-dermatodea_contig10680.473.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10680 3529..5875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10680.473.1 ID=prot_S-dermatodea_contig10680.473.1|Name=mRNA_S-dermatodea_contig10680.473.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=281bp
EEGDEQARFEDDTDSFMLRRREFCFPGIPPIVLRQEFVSVDGTGGAVWRS
SIQFATFVCGEEGKRCLPLAGRSVLEVSSGLGLGAIAAWHLGASPVVATD
VDEENGPMALLSYNAVANCSRRLASVKNHGTSAGGERDGEESCLPLTDIE
VDKADGRDTSWAKGDMKQPLHVRALRWGSSSQLADAMTTFEGFGPDVVLA
CDVIFDESLLPDLSDTLAGACVLKTREGKRPTLCMSHQRRNRGREGPFFA
NLSTRLGGGAWEEVHREDDLSVFIFRGAVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019410Methyltransf_16
IPR029063SAM-dependent_MTases