mRNA_S-dermatodea_contig10621.437.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: D7FK63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK63_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.930e-59 Identity = 176/220 (80.00%), Postives = 185/220 (84.09%), Query Frame = 3
Query: 153 MQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKAKTREQAKAKADALVQVDFDDGHTQAMFGDTVTVTTVVGIPDSDDE-DAVEAERLEKELLEEKKRLRAERLAGHGGRGXXXXXXXXXXXXXDAEGAKEERWSLAAVSKRLAAKMPAKPRKGVAKRAANXXXXXXXXXXXXXXXXXXXXXXXXXXXSASALMDKARGGMPRTELAKKKRKR 809
MQEIKDRKERL XXXXXXXXXXXXXXELGV+EDL SFDIK K RE AKAKA+ LVQVDF+DGHTQAMFGDTVTVTTVVGIPDSDDE DA E RLEKELL+EKKR RAERL G XXXXXX D+EGAKEERWSLAAVSKRLAA MPAKPRKG AKR XXXXXXXXXXXXXXXXXXXXXXXXXX +ALMDKARG MPR EL+K K++R
Sbjct: 1 MQEIKDRKERLEXXXXXXXXXXXXXXELGVKEDLGSFDIKGKARENAKAKAEQLVQVDFEDGHTQAMFGDTVTVTTVVGIPDSDDEEDARETARLEKELLQEKKRKRAERLE-RGRXXXXXXXXARGGVAGDSEGAKEERWSLAAVSKRLAANMPAKPRKGAAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AALMDKARGSMPRAELSKGKKRR 216
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: A0A836CPQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ3_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.880e-28 Identity = 92/216 (42.59%), Postives = 115/216 (53.24%), Query Frame = 3
Query: 39 KGGGKKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGV-QEDLDSFDIKAKTREQAKAKADALVQV-DFDDGHTQAMFGDTVTVTTVVGI-PDSDDEDAVEAE---------------RLEKELLEEKKRLRAERLAGHGGRGXXXXXXXXXXXXXDAEGAKEERWSLAAVSKRLAAKMPAKPRKG 632
K G K+P E+ FDP+AR +YL GFHKRKQ RRRFGLAMQ+IKDRKERL ELG+ DL FD+KA+ R+ A + +V DF D T+AMFG VTVTT GI P SDDE+ E +++EL E K+ +LA H A++ WSLAAV++R+AAKMP K R G
Sbjct: 7 KKGKKRPITEISFDPEARTEYLQGFHKRKQERRRFGLAMQQIKDRKERLEERKEKRVANQEKLDELGLGSRDLGEFDMKAQRRKATAADPERGAEVVDFADDATRAMFGGDVTVTTTFGIAPGSDDEEDGGREXXXXXXXXXXXSGAGHMDEELREHKRA----KLARH---------------------AQDAHWSLAAVTRRVAAKMPTKKRHG 197
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: A0A6H5K5F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F5_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.130e-25 Identity = 115/154 (74.68%), Postives = 121/154 (78.57%), Query Frame = 3
Query: 351 MFGDTVTVTTVVGIPDSDDE-DAVEAERLEKELLEEKKRLRAERLAGHGGRGXXXXXXXXXXXXXDAEGAKEERWSLAAVSKRLAAKMPAKPRKGVAKRAANXXXXXXXXXXXXXXXXXXXXXXXXXXXSASALMDKARGGMPRTELAKKKRKR 809
MFGDTVTVTTVVGIPDSDDE DA E RLEKELL+EKKR XXXXXXXXX D+EGAKEERWSLAAVSKRLAA MPAKPRK AK XXXXXXXXXXXXXXXXXXXXXXXXXXX +ALMDKARG MPR EL+K K++R
Sbjct: 1 MFGDTVTVTTVVGIPDSDDEEDARETARLEKELLQEKKRXXXXXXXXXXX--XXXXXXXXXGVAGDSEGAKEERWSLAAVSKRLAANMPAKPRKAAAK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMDKARGSMPRAELSKGKKRR 149
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: A0A8K1C2G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2G3_PYTOL) HSP 1 Score: 82.8 bits (203), Expect = 3.760e-15 Identity = 56/141 (39.72%), Postives = 77/141 (54.61%), Query Frame = 3
Query: 21 MNRKNVKGGGKKP------RVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQE---DLDSFDIKAKTREQAKAKADALVQV-DFDDGHTQAMFGDTVTVTTVVGIPDSDDED 413
M + GGGKKP ++ + FD D RK++LTGFHKRKQ RRRFGL M+ K +K+ + L ++E D + + A++ E + + + +V FDD HTQ+ FGD VTVTT VG SD ED
Sbjct: 1 MGKNKSHGGGKKPANKKKSKLVITFDADKRKEFLTGFHKRKQERRRFGLDMEAYKQKKKLMEARKQRREEHKQMLERLNIKEGDEDEAATNNVAESDEDSDSDQEEATKVMTFDDVHTQSKFGDVVTVTTSVGDLKSDSED 141
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: W4G9Q9_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9Q9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 6.520e-14 Identity = 63/149 (42.28%), Postives = 73/149 (48.99%), Query Frame = 3
Query: 30 KNVKGGGK-----KPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKAKTREQAKAKADAL----VQVDFDDGHTQAMFGDTVTVTTVVGIPDSDDEDAVEAERLEKELL 449
K KGG K K ++ V FD D RKDYLTGFHKRKQ RRRFG M+ K +K + + ++ A E A K A VDFDD HTQ FGD VTVTT VG SD ED ++ E E ELL
Sbjct: 2 KPQKGGAKRTSKPKSKLIVTFDADKRKDYLTGFHKRKQDRRRFGHDMEAFKKQKALIEARKIRKA---------------EQHELMASLPEVANVKPVATDGDTEVVDFDDAHTQGKFGDVVTVTTSVGELKSDSEDELDDE--EHELL 133
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: A0A5D6XSU7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSU7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 7.360e-14 Identity = 57/134 (42.54%), Postives = 70/134 (52.24%), Query Frame = 3
Query: 15 GTMNRKNVKGGGKKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKAKTREQAKAKADALVQV-DFDDGHTQAMFGDTVTVTTVVGIPDSDDED 413
G+ + N+K KK ++ V FDP+ R +YLTGFHKRKQ RRRFGL M+ K K L +L + E D AK K A+ V FDD HTQ+ FGD VTVTT VG SD+ D
Sbjct: 38 GSDKKPNLK---KKSKLVVTFDPEKRTEYLTGFHKRKQERRRFGLDMEAFKQHKRLLEARKQRREEQKEQLAKLNLLEP--PADEAAKPGASDDEKDAAVTNVLQFDDEHTQSKFGDVVTVTTSVGDLKSDESD 166
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: W7TCP2_9STRA (Nucleolar protein 12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCP2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 9.270e-14 Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 3
Query: 18 TMNRKNVKGGGKKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXEL-----GVQEDLDSFDI-KAKTREQAKAKADALVQVDFDDGHTQAMFGDTVTVTTVVGIPDSDDED 413
T R + G K ++ +VFDP+AR++YLTGF KRK+ RR FGLAMQ++K+RK RL +L G + L + K +E + KA V +DD T A FG++V VTT GIP D+ED
Sbjct: 27 THARLKIGGYKKNGKLALVFDPEARREYLTGFSKRKKERRTFGLAMQQVKNRKARLMEREELRKAKKGALDDLPASIKGAEPYLSGTALANGKEKETMETKAKEEV---YDDRFTTATFGESVLVTTSFGIPSGDEED 161
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: A0A7S1UHQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHQ2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 7.540e-13 Identity = 58/148 (39.19%), Postives = 74/148 (50.00%), Query Frame = 3
Query: 48 GKKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSF-------------------DIKAKTREQAKAKADALVQVDFDDGHTQAMFGDTVTVTTVVGIPDSDDEDAVEAERL 434
GKK R+EV FDP+ARK++LTGF KRK RRR GLAMQ +KDR+E L V E D+ D K E+ A + L +F D TQ FGD VTVTT +G+ ++DDE + + RL
Sbjct: 8 GKKRRLEVSFDPEARKEFLTGFRKRKLERRRHGLAMQALKDRRELLETRKELRENRRASRRGTTVDELKDAEAEEAXXXXXXXXXXXXXDEDTKPAASEKTSASREEL---EFTDNVTQERFGDVVTVTTTLGL-EADDEGSDDEARL 151
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: K3WTL5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTL5_GLOUD) HSP 1 Score: 75.9 bits (185), Expect = 1.480e-12 Identity = 50/124 (40.32%), Postives = 64/124 (51.61%), Query Frame = 3
Query: 51 KKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKAKTREQAKAKADALVQV-DFDDGHTQAMFGDTVTVTTVVGIPDSDDEDAV 419
KK ++ V FDP+ RK+YLTGFHKRKQ RRRFGL M+ K +K++ L + E + A+ +V FDD HTQ FGD VTVTT +G SD ED +
Sbjct: 43 KKSKLVVTFDPEKRKEYLTGFHKRKQERRRFGLDMEAFKQQKQQ-----------KEKLASLNLLEPXXXXXXXXXXXXXXXXXSKAVTKVMHFDDEHTQNKFGDVVTVTTSIGDLQSDSEDEI 155
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Match: A0A1V9YL26_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL26_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.960e-12 Identity = 58/144 (40.28%), Postives = 74/144 (51.39%), Query Frame = 3
Query: 51 KKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKAKTREQAKAKADALVQVDFDDGHTQAMFGDTVTVTTVVGIPDSDDEDAVEAERLEKELLE-EKKRLRAER 479
KK ++ V FD D RKDYLTGF KRKQ RRRFG M+ K +K + L+S A ++ A+ K ++ FDD HTQ FG+ VTVTT+VG SD ED + E E+ L KK+ RA R
Sbjct: 9 KKSKLVVTFDADKRKDYLTGFSKRKQERRRFGHDMEAFKKQKALIEQRKIRKAEQKKL---------LESLPEVADVKQVAEDKDKEVMS--FDDAHTQDKFGNVVTVTTMVGDLKSDSEDELSEEENEQLLAHLAKKKERASR 141 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10621.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10621.437.1 >prot_S-dermatodea_contig10621.437.1 ID=prot_S-dermatodea_contig10621.437.1|Name=mRNA_S-dermatodea_contig10621.437.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=264bp MNRKNVKGGGKKPRVEVVFDPDARKDYLTGFHKRKQARRRFGLAMQEIKDback to top mRNA from alignment at S-dermatodea_contig10621:5153..7223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10621.437.1 ID=mRNA_S-dermatodea_contig10621.437.1|Name=mRNA_S-dermatodea_contig10621.437.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2071bp|location=Sequence derived from alignment at S-dermatodea_contig10621:5153..7223+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10621:5153..7223+ >mRNA_S-dermatodea_contig10621.437.1 ID=mRNA_S-dermatodea_contig10621.437.1|Name=mRNA_S-dermatodea_contig10621.437.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at S-dermatodea_contig10621:5153..7223+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |