prot_S-dermatodea_contig10569.396.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10569.396.1
Unique Nameprot_S-dermatodea_contig10569.396.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length160
Homology
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BLAST of mRNA_S-dermatodea_contig10569.396.1 vs. uniprot
Match: A0A6H5JFY4_9PHAE (zf-C2HC5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY4_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.190e-19
Identity = 54/97 (55.67%), Postives = 56/97 (57.73%), Query Frame = 0 
Query:    4 KVRAWFEGELRRMLGFDEVEEIARFALDSFSTSQPAELRQYLEQFLGQSREVQKLCDELFSRRNAAATPGPVLGAGSK------TKPTASDDFWGAG 94
            K RAWFEGELRRMLGFDEVEEIARFALDSF  SQP ELRQYLEQFLGQSR  + L                      K       K    +DFWG G
Sbjct:    3 KTRAWFEGELRRMLGFDEVEEIARFALDSFPVSQPVELRQYLEQFLGQSRGGKSLLTAEGGNNXXXXXXXXXXXXXGKGRGKVYQKAAVEEDFWGGG 99
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BLAST of mRNA_S-dermatodea_contig10569.396.1 vs. uniprot
Match: A0A7S2SAT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAT0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.610e-7
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0 
Query:    4 KVRAWFEGELRRMLGFDEVEEIARFALDSFSTSQPAELRQYLEQFLGQSREVQKLCDELFSRRNAAATPGPVLGAGSKTKPTASDD 89
            + +AW  GELR++ GFDEVEE+A + L +F       L+Q+L + LG S  ++ L  EL SRR A A         S+  P  +++
Sbjct:   22 ETKAWLLGELRKLFGFDEVEEMADYLL-AFPPDDAVSLQQFLVELLGASEAIETLVRELSSRRQADAATSAAPPPSSRAAPVRTNE 106
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10569.396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFY4_9PHAE1.190e-1955.67zf-C2HC5 domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2SAT0_9STRA4.610e-737.21Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10569contigS-dermatodea_contig10569:5469..6804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10569.396.1mRNA_S-dermatodea_contig10569.396.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10569 5469..7682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10569.396.1 ID=prot_S-dermatodea_contig10569.396.1|Name=mRNA_S-dermatodea_contig10569.396.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=160bp
MGDKVRAWFEGELRRMLGFDEVEEIARFALDSFSTSQPAELRQYLEQFLG
QSREVQKLCDELFSRRNAAATPGPVLGAGSKTKPTASDDFWGAGAGASSS
RAAGSARGGGGVGGRGQGQERQTGKGKAKGKVYQKAAAEDFWGGGTTSAR
STPAKSTPIP
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