prot_S-dermatodea_contig10543.380.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10543.380.1
Unique Nameprot_S-dermatodea_contig10543.380.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length66
Homology
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BLAST of mRNA_S-dermatodea_contig10543.380.1 vs. uniprot
Match: D8LKE3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE3_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.510e-24
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0 
Query:    1 MSTGVDPGDVLLCDLGNKALLVEDLENALRLWTRPVVLIAGRNSLDRLPRSVPRTILYLDLSWNR 65
            + T  +P DVLL DLG+++LL EDLE ALRLWTRP +LIAGRNSLDRLP +VP TILYLDLSWNR
Sbjct:  107 LPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNR 171
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BLAST of mRNA_S-dermatodea_contig10543.380.1 vs. uniprot
Match: A0A6H5JHT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT2_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.030e-23
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0 
Query:    1 MSTGVDPGDVLLCDLGNKALLVEDLENALRLWTRPVVLIAGRNSLDRLPRSVPRTILYLDLSWNR 65
            + T  +P DVLL DLG++ LL EDLE ALRLWTRP +LIAGRNSLDRLP +VP TILYLDLSWNR
Sbjct:  133 LPTAANPSDVLLVDLGSRLLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNR 197
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BLAST of mRNA_S-dermatodea_contig10543.380.1 vs. uniprot
Match: A0A5D6YF65_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF65_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 2.600e-5
Identity = 21/63 (33.33%), Postives = 36/63 (57.14%), Query Frame = 0 
Query:    2 STGVDPGDVLLCDLGNKALLVEDLENALRLWTRPVVLIAGRNSLDRLPRSVPRTILYLDLSWN 64
            S G+D  +   CDL  + L    +E  LR++    V+    N ++R+P ++P +IL LD+S+N
Sbjct:   12 SLGLDGAESSFCDLSGRGLAAAQIERTLRVFETAEVIDLSNNEIERIPATIPHSILALDVSFN 74
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10543.380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKE3_ECTSI5.510e-2473.85Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JHT2_9PHAE1.030e-2373.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6YF65_9STRA2.600e-533.33Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10543contigS-dermatodea_contig10543:157..354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10543.380.1mRNA_S-dermatodea_contig10543.380.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10543 157..354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10543.380.1 ID=prot_S-dermatodea_contig10543.380.1|Name=mRNA_S-dermatodea_contig10543.380.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=66bp
MSTGVDPGDVLLCDLGNKALLVEDLENALRLWTRPVVLIAGRNSLDRLPR
SVPRTILYLDLSWNR*
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