mRNA_S-dermatodea_contig1054.375.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1054.375.1
Unique NamemRNA_S-dermatodea_contig1054.375.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: D7G4N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N4_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 3.770e-117
Identity = 212/334 (63.47%), Postives = 242/334 (72.46%), Query Frame = 1 
Query:    1 LEGIMHGGQMYLVDSERRVFSTERDDSGEPLQVGIFDDVRGVVVLLKREACSSPTXXXXXXXXXXXX---------TQEPSV------AVTDGAEVGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLGGKGPRDVVDYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQ-SKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPPKRYMYYSPQGSRLQVKSSERKTSPFNTFWYIRLGDGPVTSKV 954
            LEGI+H G MYLVD+ RRVFS +RD+ G  ++VG FDD  G V+++         XXXXXXXXXXXX         +  PS         TD  E G                XXXXXXXXXXXX        A +G +    VV+YPFEVEECDHCETSERAY+DI PLL+ALA+ LGKPPE+LVIYDPYYCQGSTV RLA+LGFP+V+NRKE+FYEVV+N  +P+HDVVVTNPPFSG+H+ KIL FCARQ +KPWFLLLPNYVYLKDYY  SL R SG+    PFYLTPPKRYMYYSPQGSRL+VKSSERKTSPFNTFWYI LGD  VTSK+
Sbjct:  162 LEGIVHDGAMYLVDARRRVFSAQRDEQGGLVEVGTFDDKGGKVIMIXXXXXXXXXXXXXXXXXXXXXXXXXXAGLISSPPSALHRDPATKTDATEAGN-----------GKAKXXXXXXXXXXXXAGSSEDVAASVGAEAESVVVEYPFEVEECDHCETSERAYSDISPLLSALAAELGKPPEDLVIYDPYYCQGSTVGRLASLGFPRVHNRKEDFYEVVKNGNIPQHDVVVTNPPFSGEHMPKILKFCARQGAKPWFLLLPNYVYLKDYYEPSLGRRSGQGATRPFYLTPPKRYMYYSPQGSRLKVKSSERKTSPFNTFWYIHLGDCAVTSKI 484
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: A0A7S3XRY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRY6_HETAK)

HSP 1 Score: 210 bits (535), Expect = 6.630e-63
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 1 
Query:  385 VVDYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPPKRYMYYSPQGSRLQVKSSERKTSPFNTFWYIRL 927
            V +YP+ V+E DHCET E AY DI  +L  +A  L KP + L IYDPY+CQG  ++    LGF  VYN+ E+FYE V++   P+ DV+VTNPP+SGDH+ +IL FC    KPWFLL+PN+VY+K+YY +            P Y+TP KRY YYSP+ SR  VKSSERKTSPF +FWY  L
Sbjct:   49 VFEYPYAVDEDDHCETCEEAYEDIATILEHIAEDLNKPKKCLQIYDPYFCQGLVIKSFEKLGFSSVYNKLEDFYEKVDSKSTPDFDVLVTNPPYSGDHIERILKFCIASKKPWFLLVPNWVYMKEYYMNLTKN------IKPIYITPAKRYSYYSPRVSRTNVKSSERKTSPFPSFWYADL 223
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: A0A7S4D5V1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5V1_HETAK)

HSP 1 Score: 210 bits (535), Expect = 5.620e-62
Identity = 97/181 (53.59%), Postives = 123/181 (67.96%), Query Frame = 1 
Query:  385 VVDYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPPKRYMYYSPQGSRLQVKSSERKTSPFNTFWYIRL 927
            V +YP+ V+E DHCET E AY DI  +L  +A  L KP + L IYDPY+CQG  ++    LGF  VYN+ E+FYE V++   P+ DV+VTNPP+SGDH+ +IL FC    KPWFLL+PN+VY+K+YY +            P Y+TP KRY YYSP+ SR  VKSSERKTSPF +FWY  L
Sbjct:  124 VFEYPYAVDEDDHCETCEEAYEDIATILEHIAEDLNKPKKCLQIYDPYFCQGLVIKSFEKLGFSSVYNKLEDFYEKVDSKSTPDFDVLVTNPPYSGDHIERILKFCIASKKPWFLLVPNWVYMKEYYMNLTKN------IKPIYITPAKRYSYYSPRVSRTNVKSSERKTSPFPSFWYADL 298
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: A0A835YHP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHP0_9STRA)

HSP 1 Score: 202 bits (514), Expect = 7.400e-59
Identity = 102/201 (50.75%), Postives = 124/201 (61.69%), Query Frame = 1 
Query:  388 VDYPFEVEECDHCETSE--------------------RAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPPKRYMYYSPQGSRLQVKSSERKTSPFNTFWYIRLG 930
            VDYPF+V++ +HCETS                      AY  I PLL ALA+  GKP  +L IYDPYYCQGS V    ALGFP+V+N KE+FY V+E  RVP+HD +VTNPP+SGDHV ++L  C    +PW LLLPNYVY K++Y    A        +  ++TPPKRY YY         +SSERKTSPF TFWYI LG
Sbjct:   96 VDYPFDVDQDNHCETSXXXXXXXXXXXXXXXXXXXXAEAYAHIAPLLEALAAAKGKPKAKLRIYDPYYCQGSVVANFVALGFPRVHNVKEDFYRVIEEGRVPKHDALVTNPPYSGDHVERLLRHCVSSKRPWLLLLPNYVYTKEFYRQLTAASK-----TAVFITPPKRYHYYR--------QSSERKTSPFITFWYIDLG 283
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: L1JYH6_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JYH6_GUITC)

HSP 1 Score: 194 bits (492), Expect = 3.570e-58
Identity = 91/174 (52.30%), Postives = 113/174 (64.94%), Query Frame = 1 
Query:  400 FEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPPKRYMYYSPQGSRLQVKSSERKTSPFNTFWYI 921
            F VE  DHCET   AY DI P+L A+AS +GK  +EL+IYDPYYC G   + L   GF  VYN+ E+FYE V+    P  DV+VTNPP+S DH+ ++ SFC+   KPW +L+PNYVY KDYY   L  G       PFY+ PP RY Y SP G+R    S E+KTSPF +FW+I
Sbjct:    1 FSVEHQDHCETPGEAYDDIVPVLLAIASNIGKRADELMIYDPYYCNGLVAQNLRDRGFQHVYNKNEDFYEAVKQGTTPPFDVLVTNPPYSNDHIERLFSFCSSCEKPWMVLVPNYVYTKDYYEKMLKSG-----VRPFYVIPPNRYEYISPAGAR---GSREKKTSPFVSFWFI 166
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: A0A7S0QTD9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTD9_9CRYP)

HSP 1 Score: 192 bits (487), Expect = 3.680e-56
Identity = 93/181 (51.38%), Postives = 118/181 (65.19%), Query Frame = 1 
Query:  394 YPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPP-KRYMYYSPQGSRLQVKSSERKTSPFNTFWYIRLGD 933
            + FE ++ DHCETSE AY DI   L  LAS LGK P++L IYDPYYC G+ V+ LAA GF  VYN+ E+FY  +   RVP +DV VTNPP+SGDH+ ++L FC   SKP+F L+PNYVY K YY     +        PFYL P  +RY +++P G R Q    E+KTSPF +FWY   G+
Sbjct:   21 HTFETDKDDHCETSEEAYDDISVFLCRLASILGKTPKDLAIYDPYYCNGAVVKHLAARGFGNVYNKNEDFYRTIAEGRVPHYDVCVTNPPYSGDHIERMLKFCVESSKPFFCLVPNYVYSKPYYDPLTEK------CRPFYLIPENRRYEFWTPGGFRKQ-SLREKKTSPFISFWYCHAGE 194
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: A0A7S0D9T2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D9T2_MICPS)

HSP 1 Score: 191 bits (485), Expect = 1.180e-55
Identity = 92/183 (50.27%), Postives = 116/183 (63.39%), Query Frame = 1 
Query:  391 DYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPP----ASPFYLTPP--KRYMYYSPQGSRLQVKSSERKTSPFNTFWYI 921
            D+PFEV+  DHCET   AY D++P L  +A  L KP E+L IYDPY+C+GS  + LA LGF  VYN  E+FY+V+E +RVP HDV++TNPP+SGDH  KIL FC R  KPW LLLPN+V  K YY  SL      P       P +L P   K Y Y++P   R   +   + T+PF TFWY+
Sbjct:   22 DHPFEVDAADHCETPFAAYQDVEPFLFRVALALRKPKEKLRIYDPYFCEGSVAKHLARLGFTNVYNENEDFYKVIEQNRVPPHDVLLTNPPYSGDHFRKILEFCGRSEKPWLLLLPNFVCRKTYYQPSLGLSEDGPEDGKKEKPLFLIPDPTKPYRYWAP--GRAGFEERAKGTTPFETFWYV 202
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: C1N177_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N177_MICPC)

HSP 1 Score: 193 bits (491), Expect = 6.030e-55
Identity = 88/184 (47.83%), Postives = 120/184 (65.22%), Query Frame = 1 
Query:  376 PRDVVDYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPP--KRYMYYSPQGSRLQVKSSERKTSPFNTFWYI 921
            P    D+PFE +  DHCET  +AY D++P L  +A  L KP E+LVIYDPY+C+GS V+ LA LGF  V NR E+FY+ ++  R+PEHDV++TNPP+SGDH  +ILSFC +  KPW LLLPN+V  K YY  ++   S      P +L P   K Y Y++P     + ++  + T+PF TFWY+
Sbjct:  124 PTVASDHPFEYDAADHCETPFQAYQDVEPFLFRVALALKKPKEKLVIYDPYFCEGSVVKHLARLGFANVINRNEDFYQCIDEKRIPEHDVLLTNPPYSGDHFRRILSFCGKSKKPWLLLLPNFVCRKQYYEPAIGASS-----KPLFLIPDQLKPYRYWAPGRKGYEDRTRAKGTTPFETFWYV 302
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: A0A7S3GZA9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZA9_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.880e-54
Identity = 93/189 (49.21%), Postives = 126/189 (66.67%), Query Frame = 1 
Query:  391 DYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQS--KPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPP--KRYMYYSPQGSRLQVKSSERKTSPFNTFWYIRLGDGPVT 945
            DYP+ V   DHCE+   AY DI+  L  +A  LGK  E L I+DPY+C+GS  ERLAA+GFP V N K +FYE +  + VP++DV++TNPP+SG H+ ++L +C   +  +PWFLLLPNYVY KDYY+    R  G   + PFY+TP   +RY+Y +P+G R Q KS  + TSPF TFWY ++ +   T
Sbjct:   35 DYPYPVVPDDHCESPMEAYQDIEHFLVVIAKSLGKTKESLRIFDPYFCEGSMKERLAAIGFPNVTNEKRDFYESITTNTVPDYDVLITNPPYSGTHMERLLQYCNENNGTRPWFLLLPNYVYTKDYYAPIFERNKGG--SKPFYVTPANGRRYLYTTPKGRR-QEKSG-KFTSPFPTFWYCQIHENKDT 219
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BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Match: C1FIX8_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FIX8_MICCC)

HSP 1 Score: 192 bits (488), Expect = 2.070e-54
Identity = 89/183 (48.63%), Postives = 121/183 (66.12%), Query Frame = 1 
Query:  376 PRDVVDYPFEVEECDHCETSERAYTDIKPLLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEVVENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDYYSSSLARGSGRPPASPFYLTPP-KRYMYYSPQGSRLQVKSSERKTSPFNTFWYI 921
            P   VD+PFEV+  DHCET  +AY DI+P L  +A  L KP ++L IYDPY+C+GS  + LA LGF  VYN+ E+FY+ +E  R+PEHDV++TNPP+SGDH  +ILSFCA+  KPW LLLPN+V  K YY   +    G    + F +  P K Y Y++P     + ++  + T+PF TFWY+
Sbjct:  124 PAASVDHPFEVDAADHCETPFQAYQDIEPFLFRMALALKKPKDKLRIYDPYFCEGSVAKHLARLGFTSVYNKNEDFYKCIEEKRIPEHDVLLTNPPYSGDHFRRILSFCAKNKKPWLLLLPNFVCRKQYYQPCV----GEDVKALFLIPDPTKPYRYWAPGRRGFEDRNQAKGTTPFETFWYV 302
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1054.375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N4_ECTSI3.770e-11763.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XRY6_HETAK6.630e-6353.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D5V1_HETAK5.620e-6253.59Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835YHP0_9STRA7.400e-5950.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1JYH6_GUITC3.570e-5852.30Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S0QTD9_9CRYP3.680e-5651.38Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0D9T2_MICPS1.180e-5550.27Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1N177_MICPC6.030e-5547.83Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S3GZA9_9STRA1.880e-5449.21Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
C1FIX8_MICCC2.070e-5448.63Uncharacterized protein n=1 Tax=Micromonas commoda... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1054contigS-dermatodea_contig1054:48..6028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue2.8e-94
Seed eggNOG ortholog2880.D7G4N4
EggNOG OGs2BXY2@1,2S2G6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_001820.1
Exons5
Model size972
Cds size960
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1054.375.1prot_S-dermatodea_contig1054.375.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1054 48..6016 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924161.987619-CDS-S-dermatodea_contig1054:47..1861622924161.987619-CDS-S-dermatodea_contig1054:47..186Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 48..186 -
1694079060.0847056-CDS-S-dermatodea_contig1054:47..1861694079060.0847056-CDS-S-dermatodea_contig1054:47..186Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 48..186 -
1622924162.0039809-CDS-S-dermatodea_contig1054:1017..10941622924162.0039809-CDS-S-dermatodea_contig1054:1017..1094Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 1018..1094 -
1694079060.0949132-CDS-S-dermatodea_contig1054:1017..10941694079060.0949132-CDS-S-dermatodea_contig1054:1017..1094Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 1018..1094 -
1622924162.016355-CDS-S-dermatodea_contig1054:2623..27701622924162.016355-CDS-S-dermatodea_contig1054:2623..2770Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 2624..2770 -
1694079060.1039228-CDS-S-dermatodea_contig1054:2623..27701694079060.1039228-CDS-S-dermatodea_contig1054:2623..2770Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 2624..2770 -
1622924162.0274506-CDS-S-dermatodea_contig1054:4061..42591622924162.0274506-CDS-S-dermatodea_contig1054:4061..4259Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 4062..4259 -
1694079060.1126351-CDS-S-dermatodea_contig1054:4061..42591694079060.1126351-CDS-S-dermatodea_contig1054:4061..4259Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 4062..4259 -
1622924162.0382788-CDS-S-dermatodea_contig1054:5617..60161622924162.0382788-CDS-S-dermatodea_contig1054:5617..6016Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 5618..6016 -
1694079060.1240501-CDS-S-dermatodea_contig1054:5617..60161694079060.1240501-CDS-S-dermatodea_contig1054:5617..6016Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1054 5618..6016 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924162.0465422-UTR-S-dermatodea_contig1054:6016..60281622924162.0465422-UTR-S-dermatodea_contig1054:6016..6028Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1054 6017..6028 -
1694079060.1336539-UTR-S-dermatodea_contig1054:6016..60281694079060.1336539-UTR-S-dermatodea_contig1054:6016..6028Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1054 6017..6028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1054.375.1

>prot_S-dermatodea_contig1054.375.1 ID=prot_S-dermatodea_contig1054.375.1|Name=mRNA_S-dermatodea_contig1054.375.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=320bp
MHGGQMYLVDSERRVFSTERDDSGEPLQVGIFDDVRGVVVLLKREACSSP
TRGGSGGGSGGGVTQEPSVAVTDGAEVGKRSKKSKKKGKAGGEEDQGGGA
GGGGGRGGVETTTTAVLGGKGPRDVVDYPFEVEECDHCETSERAYTDIKP
LLTALASGLGKPPEELVIYDPYYCQGSTVERLAALGFPKVYNRKENFYEV
VENDRVPEHDVVVTNPPFSGDHVTKILSFCARQSKPWFLLLPNYVYLKDY
YSSSLARGSGRPPASPFYLTPPKRYMYYSPQGSRLQVKSSERKTSPFNTF
WYIRLGDGPVTSKVNILIN*
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mRNA from alignment at S-dermatodea_contig1054:48..6028-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1054.375.1 ID=mRNA_S-dermatodea_contig1054.375.1|Name=mRNA_S-dermatodea_contig1054.375.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5981bp|location=Sequence derived from alignment at S-dermatodea_contig1054:48..6028- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCGAGGGCATCATGCACGGAGGCCAGATGTACCTCGTAGACTCGGAGAG
GAGAGTGTTCTCGACTGAGCGCGACGATAGCGGAGAACCGCTCCAGGTCG
GAATCTTCGACGATGTCCGGGGAGTCGTGGTTCTCTTAAAGCGAGAGGCG
TGTTCCTCGCCTACCCGCGGCGGCAGCGGTGGCGGCAGCGGCGGGGGGGT
TACTCAGGAGCCGTCGGTAGCGGTGACCGACGGCGCAGAGGTTGGGAAAA
GAAGCAAGAAGAGTAAGAAGAAGGGGAAGGCTGGGGGAGAGGAGGATCAG
GGTGGGGGGGCGGGCGGCGGCGGCGGCAGGGGGGGCGTGGAGACTACCAC
TACTGCTGTTTTGGGAGGAAAAGGGCCCCGGGATGTCGTGGATTACCCGT
TCGAGGTCGAGGTGCGTGATGCGCTTAGGAAGAGACGGTCGTGTAGAACC
GGCGCAGGGTGATTGTGCCTACGTGGTTGTCTGTCGGGACGTTGTGGCCA
TGTCGTAAACGTTGTGGTTTTCTATCTCGTCATCGACGGCAGTGGACGTG
TGGTGTTGCGGCACCGCCGCGATTCGACAACAGCCAGTACACCATTTTTT
ATCTTCGTGGAACGTAAATCCTCAACGGAGAAAGAGTTTCTGGCCGACCA
CGAAAAACGTCCAAAGCTTTTTCGAGTTTTTCGATTTCCCATATCCCATC
TGACCACGAGGTGGGATCGGCAACCATTGGTGGGCCGGTCGGTTGTAAGC
ATGATGAACAATCATCTCAATAAAATAGCAGACCTAGAACTCTAGTCTTT
GCTTGGCACCGCGTCGTTACTTTTCGTATGTACATATAGTACGATATTTT
ACACGTGTCTCAGGAAGGGACTGCGCGTAGCGAGCGGTATAATGACTGAA
ACCACCGCGAGCGGTACACAAACCACCTTGTCCTCATTGGCGTCGACGGT
ACATTCACAAATGGCACTGGTGATTGATGTAAGCGTTTGGTCAACAAGGT
TTTGCCAATTTTTGCTGCCGATAATTGCCTCTCGAACGCTGTAATCGCAC
GAGGGGGGTCTAAGTGGGGGTATTCACCCTTCAACGGCGGAGATTGTAGT
GTAGTGTAAGTGCACATGCAATTTGGGACAAGGGTGCGACCAGATACACA
GCCTACCCCTGTAATTTGGAATGCAAGTACGATCACTGATTGTACCTGCA
CGTGTATTTTTTAAACCAGTACCATACAATCAGGTACAATTAGAGTACAC
TAACCGTACACTCGTAAAGTACACGCGCAAAGTACACCGGTAACACGTAT
ACAGTACACTACACTACACCCTCCCCTTTTATAACCCTTGCCCTTTGTCC
TTCCCTCTTGCTGCGCTTACAACATGCAAGAGGCCGTTTTATCCGCGTGA
AAAGGGGGAACAAACTTGGCCGACCAAAACCTTCTGCGGACCACACCAAA
ACTGTGAAACACGGCGGCTTCCGGCGCGCTATCATAACACCCCCCCCCCC
CCTTTCCGCGGCCTTCGAATCGCAAAAAGTGCCTCAGGAAGAAATGTGAT
GCCTGGCGTATTTTTCCCTGGCTTTCAAAACACTCGGCGGAACTCCTAGA
AGATTGCGCCCGCGCCATAAATTGTTCGATACCGCACACTTTTGAAGCCA
ACGGGAGGTCCCATTAAGGCACTGCACCGGTCTTGCCCCCCATACCTATA
AGCCTTCGCAAATTCGCCCAACCGAGCAAAATACCCTATACGACAAAACG
ACAACGGTAACTGCCGCAGGAGTGCGACCACTGCGAGACGAGCGAGCGCG
CCTACACCGACATCAAACCGCTGCTAACGGCGCTGGCCTCGGGGTTAGGC
AAGCCGCCTGAGGAGCTGGTCATCTACGACCCTTACTACTGCCAGGGGTC
GACGGTGGAGAGACTCGCGGCGCTGGGTTTTCCCAAGGTTTACAATCGAA
AGGAGAACTTTTATGAGGTGCGGGGATAAGCGGCGCGAAACTCTGCGCGG
GGGCTGGCTTTGCCGTTTTAGAGAGGGAGATGGCAGGTTTCGACCATGTG
TGTTGGCGTGTTGCCGCGTGTTGCCGCGTGTTGAAGAATGGAAGTATAGT
TTTAGATGGCAGAATCCCTTTCACGCTTGTATAGCGAAAGTCGTTTCTCG
TGCACGCTATTTCGTGTGAGTGTGTGTGTATTTGTGTGTGTGTGTGTTTT
TTTTTTCTTTTTTTTTTCTTCTGTAATTGCACCGGCGATGCGCGCGTTCC
AACACTTACGTGTTTTTTTGTTTCCCCGTGATTTTGATGCTTGGTCGGTG
CTCGTATGATATTATTTTGATGCTTGGTCGGTGCTCGTATGATACGATAT
TCGTATGGTATTCGATTGGCCTAAATACACCTAATATGCTGTACATACGA
TTACCGTTCGCGACCAAACCACGCTCAAAACCACAAACAGAACGCACACT
CGACGTCGCGATACACGTCAAGCAACGGTCGAGCTTCTTCAAGAATGACC
TCGTCAACAGGGAGAGGTCCGATGCTACTACAGTCGCATATACCAGACCT
CTATTTCAGGCCGCGGCCTTTTTTTTCCGGATTCGGAAGGCGTCCATCTG
GAGGGTTCCCCGCCGAAGCTCATCTATCCTCGCCCTTTTCCGATTCCTCT
AGTGGCCTTTTGTATATCCGGAGTTGCTATGTCTTCTCTCTTGTTGTGAA
GGGGACTCTGAGACGATGTGGGGAGGACCAGATCGTCTACTCGAGGTCCT
TTACAACCTTATATCATAACCCTATCCACCCATAACGCCTCTCTATAACA
AACCAAATAGCTTTGTGCTATATAGTAAGTACCAGAGGCGGCATTGCTGT
ATTATTTGTAGACGTAGAGTTTTGATCACCACGGAGGTGCACAGTAATCA
GGACTACTCGTACATTTATACTGAATAGCGTAATCAAGTGTGTTTTGTTT
TCAAACCTTGGCCCGAACACCTATAAATACTGCTTTTTGTTTTTGTTTTT
GGTTGACTGGCGCCAGCTCGAAATAGCGCAGATTTTGCTGTGTAAGGCCA
TATCATATTGATTTATGGCTTGGTTGTGTTGGGCATGTCATTCTACTGTT
TGGCACATTTGGTCCTGATTGCTGTGCCCTCTCTGCACTGTTTTTTTTTC
TCCTTGACTCTTTGCGAAAGCATCTGACCACGGAGTCGGGTAGGATTAAG
CCGATCGGCTAATACGCGTGCTAATCAGTTGCTCAAATCGATTTATTGCA
CCTTCCAGGTGGTCGAGAACGACAGAGTCCCGGAGCACGACGTCGTCGTG
ACCAACCCCCCCTTCAGCGGCGACCACGTCACCAAGATCCTCAGCTTCTG
CGCGCGTCAATCCAAGCCGTGGTTCCTGCTGCTCCCGAACTACGTGTACC
TCAAGGTGCGTAATATGTCGCGCGATTTACCGCGCAGGCTGCTGCGCGGC
GGAGACGGCTGTCGCAGGTTGCTGGGTTCACGTTCGTTTGCTTTCAATCT
CGTGCCCCGGTGGTTGCCTTCTGTGGGTACCTGCGTGCGGTGGTGATGCT
ATCTACACCGGTGCCCCGAGCAGCATATATGGTTTGAGCGATGCTGACCT
CGTCTGGACTCTCTTTCGTGCTACAAGGGTGCATATTTTACAGAAGGTAC
ACAGTAGTCAGCACCCAATGTGCCAAACAGGATGTCTAACGTACTAAACC
ATATACACCAATCTGGTCTGGCCTTACCACGTCTGCGATCTTCCGCCCTG
AAACGTCAATCAAAAGCTACACTACTTTACTAATACAAGGTGTTCGGGCC
AACGTTTTATAAAAACAAGACCCTAATGCGCAATTATGCAGAAATAATGG
TCCTCATTACCGTTTACCTCCATCATAGTATGCATAGCCGGAGCCCGTCG
TCCGCGTTCATGTAATTCCTTCGAGGAACGTATACTCGGAAGGAAGACAG
ATTCTTGGGGATATTTTGCGGCACTAGATATGTATCTGTAGTATGAAAGG
CGTCACCCTGCGCGCGACGTCTGGATATGTCTTGCCGACACCCCCTCCTA
CACATCGGCCCTTCCCGTATACTTTGCTTCAGTATTGAACTTACCGTACC
CTTTGGATGATCTGTTTCATAATGCCCTCCGCGTTTTCTCGCCTTATGTA
GAATTACACATTTTCTGGTTTCGTGTTTTTCCGTGTTTGTAGACACTATT
TTTTGCGCGTCTGTCCAAAAATTCGTTCGTTCTCAAGCCGATAAGCTATA
CGTGTGAAAACCAATCAAAATCGATTAATAATCACGTTAAAAGGCCTGTC
TCACCGTTCGACCCATTGCTTACCCCTCTACCGCCGGGGTTGCGACAAAG
ACAAATCCTCCCTAGACACACGTCCTTATTAATTAATACAGGAGTCAACC
ATTTTTTTAACTCCATTGCACTGAGGCTGTACTAAATTCCATACCATTTA
CATTTTCAAAATGAAGTCTGATTGATATACATACTATATACAGTACTAAA
ATGAGGCCAGCTTTTTACGAAATTCCCATACGATTACATTTTCAAACTGT
GGCCAGATGTATATACTGAATTCCATACATTTACAAGTGTCAANNNNNNN
NNNTGTACTAAATTCCATACGATTTACATTTTCAAATACCCCTGTACGAT
TTGTATTTTGACTGCACAGCAGTAGGTAGCCACACTTGATTGCGCCCCGC
TCGGCCGCGGTCGGCCTCGGCCGCGGTCGGCCACGGTCGACCGCCGCAGG
CATATCGTTCTGTCAACGCACACACCTCACGGGCGTAGCCGTGGCTACCT
ACTAGTATCAATACAATACGCTTGGTATTTTTCGGTGCCAAACAGCCCGC
CGCGTGCAGCAAGGGCAATGCTCGACCCGCCCTCTTAACGCAACCCCCGT
GTTCGAACCTTGCTGCCCGTTCCCTGCGCTTCAGGACTACTACAGCTCGT
CCTTGGCGCGCGGGTCTGGCCGCCCCCCGGCGTCCCCGTTTTATCTCACC
CCACCAAAGAGGTAAGCGCCTGCTGTTTGCCTCAAAGAATGAATGCAAGC
GCTTGGGACGTTTTTCATAGGGGTTTAACGAGTGAGCGCTTGAGCGTTTT
ATTTATGGGACTCTCACTGCGTGCGGGGGTTTGAAGCTATTGGAAATTTG
TTTTTTTTACCCAGGGGGCTTTTCTGTCATGGACTATAAACAGCCACCAC
TTTCCTACCAACGCACACCCGGCTGACGTAGCCGTACCAATCTATAATTT
CCGCAGGGATTGGCGAGAGAGCCGCAGGAGTTTTGAGCGAACCCATGCTT
ACACAAGCTTTTCGCGGCTGACGCCGCGTCCCCCCAGTGAAGCGCAAAGC
CAAGACCAAGCATAATGGATTGGGTATCTCATGTCTGCACCCGTCCCTCT
TGTCCCTCGGGGGTGATGTCCTGTGTCATGGCTAACGGGACGCAGGGATT
GTGCCCGGAACCCATTGGGATGCTACCGAATGTGATCCGATATAAATGCT
GCGTTCTCGTGCGTTACTGTCCTAGTTTTTGAGCAATTTCGGCGAGAAGC
AAATTGTCAAAACACGATTTTTTCGTTTTTCAAGTAGAACGAGACACGAA
TCTTGACCGGAAAAATGCTGTAGCTGTTGTAAGGCCTGGCCTGACGTGAG
TTTTTTCAGATGTTGCTTCATCGCTTAGGAAGACCGTTCATCTGGGCTCC
TCCGTACCATAGGCGTAAAGTTATGGCAGTCGATCATATCATCACCAGCT
TCTGGGGCGCGGCGTTCGCCGCAATGGCAGGGGATCGGCCACCGCAAGCC
ACGCCTATCGTGAAACCGTCCGCGTCTGTATTCGCTTGACAGGTACATGT
ACTACAGCCCCCAGGGTTCGCGCCTGCAGGTCAAGAGCTCGGAGCGCAAG
ACATCTCCTTTCAACACCTTCTGGTACATCCGCCTGGGCGATGGGCCTGT
CACATCCAAGGTGAACATCCTTATTAATTAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig1054:48..6028-

>mRNA_S-dermatodea_contig1054.375.1 ID=mRNA_S-dermatodea_contig1054.375.1|Name=mRNA_S-dermatodea_contig1054.375.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at S-dermatodea_contig1054:48..6028- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACGGAGGCCAGATGTACCTCGTAGACTCGGAGAGGAGAGTGTTCTC
GACTGAGCGCGACGATAGCGGAGAACCGCTCCAGGTCGGAATCTTCGACG
ATGTCCGGGGAGTCGTGGTTCTCTTAAAGCGAGAGGCGTGTTCCTCGCCT
ACCCGCGGCGGCAGCGGTGGCGGCAGCGGCGGGGGGGTTACTCAGGAGCC
GTCGGTAGCGGTGACCGACGGCGCAGAGGTTGGGAAAAGAAGCAAGAAGA
GTAAGAAGAAGGGGAAGGCTGGGGGAGAGGAGGATCAGGGTGGGGGGGCG
GGCGGCGGCGGCGGCAGGGGGGGCGTGGAGACTACCACTACTGCTGTTTT
GGGAGGAAAAGGGCCCCGGGATGTCGTGGATTACCCGTTCGAGGTCGAGA
TGCACGGAGGCCAGATGTACCTCGTAGACTCGGAGAGGAGAGTGTTCTCG
ACTGAGCGCGACGATAGCGGAGAACCGCTCCAGGTCGGAATCTTCGACGA
TGTCCGGGGAGTCGTGGTTCTCTTAAAGCGAGAGGCGTGTTCCTCGCCTA
CCCGCGGCGGCAGCGGTGGCGGCAGCGGCGGGGGGGTTACTCAGGAGCCG
TCGGTAGCGGTGACCGACGGCGCAGAGGTTGGGAAAAGAAGCAAGAAGAG
TAAGAAGAAGGGGAAGGCTGGGGGAGAGGAGGATCAGGGTGGGGGGGCGG
GCGGCGGCGGCGGCAGGGGGGGCGTGGAGACTACCACTACTGCTGTTTTG
GGAGGAAAAGGGCCCCGGGATGTCGTGGATTACCCGTTCGAGGTCGAGGA
GTGCGACCACTGCGAGACGAGCGAGCGCGCCTACACCGACATCAAACCGC
TGCTAACGGCGCTGGCCTCGGGGTTAGGCAAGCCGCCTGAGGAGCTGGTC
ATCTACGACCCTTACTACTGCCAGGGGTCGACGGTGGAGAGACTCGCGGC
GCTGGGTTTTCCCAAGGTTTACAATCGAAAGGAGAACTTTTATGAGGAGT
GCGACCACTGCGAGACGAGCGAGCGCGCCTACACCGACATCAAACCGCTG
CTAACGGCGCTGGCCTCGGGGTTAGGCAAGCCGCCTGAGGAGCTGGTCAT
CTACGACCCTTACTACTGCCAGGGGTCGACGGTGGAGAGACTCGCGGCGC
TGGGTTTTCCCAAGGTTTACAATCGAAAGGAGAACTTTTATGAGGTGGTC
GAGAACGACAGAGTCCCGGAGCACGACGTCGTCGTGACCAACCCCCCCTT
CAGCGGCGACCACGTCACCAAGATCCTCAGCTTCTGCGCGCGTCAATCCA
AGCCGTGGTTCCTGCTGCTCCCGAACTACGTGTACCTCAAGGTGGTCGAG
AACGACAGAGTCCCGGAGCACGACGTCGTCGTGACCAACCCCCCCTTCAG
CGGCGACCACGTCACCAAGATCCTCAGCTTCTGCGCGCGTCAATCCAAGC
CGTGGTTCCTGCTGCTCCCGAACTACGTGTACCTCAAGGACTACTACAGC
TCGTCCTTGGCGCGCGGGTCTGGCCGCCCCCCGGCGTCCCCGTTTTATCT
CACCCCACCAAAGAGGACTACTACAGCTCGTCCTTGGCGCGCGGGTCTGG
CCGCCCCCCGGCGTCCCCGTTTTATCTCACCCCACCAAAGAGGTACATGT
ACTACAGCCCCCAGGGTTCGCGCCTGCAGGTCAAGAGCTCGGAGCGCAAG
ACATCTCCTTTCAACACCTTCTGGTACATCCGCCTGGGCGATGGGCCTGT
CACATCCAAGGTGAACATCCTTATTAATTAAGTACATGTACTACAGCCCC
CAGGGTTCGCGCCTGCAGGTCAAGAGCTCGGAGCGCAAGACATCTCCTTT
CAACACCTTCTGGTACATCCGCCTGGGCGATGGGCCTGTCACATCCAAGG
TGAACATCCTTATTAATTAA
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