mRNA_S-dermatodea_contig10520.367.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE) HSP 1 Score: 109 bits (273), Expect = 6.920e-27 Identity = 69/190 (36.32%), Postives = 92/190 (48.42%), Query Frame = 1
Query: 10 MLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNV-VSYHDVLELASCENIGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRGQEKQWTTCLSNDLEAF----GIIGD-----------WKEAAKNAACWCEPVKNGAETFMTEWREKETAKAVARHA 531
MLKAEV++TLLY CVTWT + + F +L +AHH ++LRV G +R RT++ +SY L + CE+I T+ K RL AG V+R RL R++ G + P GQ K W ++ DL F G D W AAK W + AE FM W E E + R A
Sbjct: 1 MLKAEVIETLLYGCVTWTLNADHFAKLRSAHHEVLLRVIGFQRRLRTDHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLPSRLMFGTI-------AGGGSPKPGGQPKTWPRAIAEDLRVFKATEGSTEDSPLVFGVGTALWPTAAKQTGKWYRGILEAAEQFMGRWHEAEAKLSRQRRA 183
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5K1C5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C5_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.820e-25 Identity = 70/175 (40.00%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRG-QEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKE 504
KIR+L+AEVV+TLLY C +W E +L HH+ + R G + R++ +SY L A CE I ATV K RL AG V+R RL R++LG + A V RG QE W + L DL AF + G WKE+AKN+ W V++GA FM +W +E
Sbjct: 97 KIRLLQAEVVETLLYGCASWRLTAEHDTKLNGTHHQFLSRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPTRMLLGAM---------AGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQE 262
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5KSH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH7_9PHAE) HSP 1 Score: 107 bits (268), Expect = 7.090e-25 Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRGQEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKE 504
KIR+L+AEVV TLLY C +W+ E + +L H + + R G + R++ +SY L A CE I ATV K RL AG V+R RL +R++LG + G GQE W L DL AFG+ G WKE+AK+ W + +++GA FM +W +E
Sbjct: 97 KIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRG--------GQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQE 262
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5KB07_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB07_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.060e-24 Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRGQEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKE 504
KIR+L+AEVV TLLY C +W+ E + +L H + + R G + R++ +SY L A CE I ATV K RL AG V+R RL +R++LG + G GQE W L DL AFG+ G WKE+AK+ W + +++GA FM +W +E
Sbjct: 127 KIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRG--------GQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQE 292
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.230e-24 Identity = 71/189 (37.57%), Postives = 99/189 (52.38%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRG-QEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKETAKAVARHAKQDVE 546
KIR+L+AEVVDTLLY C +W+ E + +L H + + R TG + ++ +SY L A CE I ATV K RL AG V+R RL +R++LG + A V RG QE W + L DL AF + G WKE+AK+ W V++GA FM +W +E + R ++ E
Sbjct: 630 KIRLLQAEVVDTLLYGCASWSPTAEHYTKLNGTHRQFLTRCTGWSKRKCSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAM---------AGGVGYRGGQESDWVSRLGEDLVAFNMSDEKEGGKWKESAKDPEVWYNKVEDGAAWFMRKWHRQEAEASAKRQRAKEAE 809
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5L5T8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T8_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.650e-24 Identity = 66/174 (37.93%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRGQEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKE 504
KIR+L+AEVV+TLLY C +W+ E + +L H + + R G + R++ +SY L A CE I ATV K RL AG V+R RL +R++LG + G GQE W L DL AFG+ G WKE+AK+ W + +++GA FM +W +E
Sbjct: 217 KIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRG--------GQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQE 382
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5JVI3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI3_9PHAE) HSP 1 Score: 108 bits (271), Expect = 3.160e-24 Identity = 69/182 (37.91%), Postives = 97/182 (53.30%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRG-QEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKETAKAVAR 525
KIR+L+AEVV+TLLY C +W+ E + +L H + + R G + R++ +SY L A CE I ATV K RL AG V+R RL +R+++G + A V RG QE W + L DL AF + G WKE+AKN+ W V++GA FM +W +E + R
Sbjct: 790 KIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRYIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLIGAM---------AGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEAEASAKR 962
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5L144_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L144_9PHAE) HSP 1 Score: 108 bits (269), Expect = 5.840e-24 Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRGQEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKE 504
KIR+L+AEVV TLLY C +W+ E + +L H + + R G + R++ +SY L A CE I ATV K RL AG V+R RL +R++LG + G GQE W L DL AFG+ G WKE+AK+ W + +++GA FM +W +E
Sbjct: 719 KIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMGDNRLPKRMLLGAMAGGTGYRG--------GQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQE 884
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5L649_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L649_9PHAE) HSP 1 Score: 104 bits (260), Expect = 6.660e-24 Identity = 67/182 (36.81%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRG-QEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKETAKAVAR 525
KIR+L+AEVV+T LY C +W+ E + +L H + + R G R R++ +SY + A CE I ATV K RL AG V+R RL + ++LG + A V RG QE W + L DL AF + G WKE+AK+ W V++GA FM +W +E ++ R
Sbjct: 116 KIRLLQAEVVETFLYGCASWSLTTEHYAKLNETHRQFLTRCVGWSRRKRSHRPLSYAQAVIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKHILLGAM---------AGGVGYRGGQEDDWVSRLGEDLVAFNMGDEKEGGKWKESAKDPEVWYHKVEDGAAWFMRKWHRQEAEESAKR 288
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Match: A0A6H5JF72_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF72_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.970e-24 Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 1 KIRMLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVVSYHDVLELASCEN-IGATVLKHRLLCAGTVIRSAAKRLHRRVILGELRRLPPKEGDAERVVPRGQEKQWTTCLSNDLEAFGII-----GDWKEAAKNAACWCEPVKNGAETFMTEWREKE 504
KIR+L+AEVV TLLY C +W+ E + +L H + + R G + R++ +SY L A CE I ATV K RL AG V+R RL +R++LG + G GQE W L DL AFG+ G WKE+AK+ W + +++GA FM +W +E
Sbjct: 396 KIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRG--------GQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQE 561 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10520.367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10520.367.1 >prot_S-dermatodea_contig10520.367.1 ID=prot_S-dermatodea_contig10520.367.1|Name=mRNA_S-dermatodea_contig10520.367.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=180bp MLKAEVVDTLLYRCVTWTAHKEQFNQLCTAHHRMVLRVTGSRRNPRTNNVback to top mRNA from alignment at S-dermatodea_contig10520:4088..4636- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10520.367.1 ID=mRNA_S-dermatodea_contig10520.367.1|Name=mRNA_S-dermatodea_contig10520.367.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=549bp|location=Sequence derived from alignment at S-dermatodea_contig10520:4088..4636- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10520:4088..4636- >mRNA_S-dermatodea_contig10520.367.1 ID=mRNA_S-dermatodea_contig10520.367.1|Name=mRNA_S-dermatodea_contig10520.367.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at S-dermatodea_contig10520:4088..4636- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |