mRNA_S-dermatodea_contig10503.359.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10503.359.1
Unique NamemRNA_S-dermatodea_contig10503.359.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: D7FPL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL2_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 1.740e-72
Identity = 145/277 (52.35%), Postives = 171/277 (61.73%), Query Frame = 1 
Query:   16 KDPLTDPDVEAAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFE-QGKVFFFFSVNYSVNFQGCAEMTSRIPDMEMRTAEVTVMEFSVKWLRLCELPYSSANQIKNSFNEDNL-VGRSRDGMELNYESGRKLLKLLWGQPEIELPKQVAEHAKTAAFSGVEVYRRP-----PPQPMG----HTKMMRGSGE---GGTSGGLGGRN---------------------------------TLQLGPSQPQRPLGPPGFLFEIESQ 705
            KDPLTDPD+EA VPVK+G KARFFVLRSLNHDNLAVS VQNKWY RR +I PFN AF+  G+ FFFF+VN S NFQGCAEMTSR+P M  RT E  VMEFSVKWLRLCELP+S A+Q+KN  ++DNL + R+  GME+ YE+GRKL KL+W QPEI+LP+ V + AK A FSGV   R P     P  P G       ++R  G    GG  GG+ G +                                         P +  GPPGFLFEIES+
Sbjct:  226 KDPLTDPDIEAIVPVKDGEKARFFVLRSLNHDNLAVSAVQNKWYARRFNIMPFNSAFDGPGRAFFFFTVNQSNNFQGCAEMTSRVPQMGPRTEEEQVMEFSVKWLRLCELPFSVASQVKNP-SQDNLPIWRASHGMEIPYEAGRKLCKLMWAQPEIDLPQHVVQQAKDAPFSGVLPARSPASGGNPTGPPGMRXPXNNLVRVGGPPLGGGAPGGVEGVSGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPPQFDGPPGFLFEIESE 501
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A7S2V1N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1N4_9STRA)

HSP 1 Score: 110 bits (275), Expect = 8.530e-27
Identity = 66/146 (45.21%), Postives = 85/146 (58.22%), Query Frame = 1 
Query:   79 RFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQ-GKVFFFFSVNYSVNFQGCAEMTSRIPDMEMRTAEVTVM----EFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIELPKQVAE 501
            RFF+++SLN+ NLAVS  Q KW   R      N AF Q  KV FFFSVN S +FQGCA M S I D +    E  V     +F V+WL +CELP+ +   ++N  N +  V RSRD  EL  E G ++L LL+ QP++EL     E
Sbjct:    5 RFFIIKSLNYKNLAVSVKQGKWATHRSHKTSLNAAFHQCSKVIFFFSVNESKHFQGCALMMSTIDD-KANVVEGNVRSWTGQFQVRWLHVCELPFRTVAHLQNPLNGNMPVIRSRDCQELTRELGVQMLVLLYRQPKVELQDAAME 149
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A2I4GVF0_JUGRE (30-kDa cleavage and polyadenylation specificity factor 30-like n=5 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GVF0_JUGRE)

HSP 1 Score: 97.1 bits (240), Expect = 1.870e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 1 
Query:   25 LTDPDVEAAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            L +    +A+P+ +G  +R+F+++S N +NL +S  Q  W  +R +    N AF+  + V   FSVN + NFQGCA+MTS+I         + A  T      FSVKWL+LCEL +     ++N FNE+  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  242 LPNQTSRSALPLPQGI-SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFQKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSEL 401
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A4V4H3J3_MUSBA (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A4V4H3J3_MUSBA)

HSP 1 Score: 96.7 bits (239), Expect = 2.550e-19
Identity = 59/161 (36.65%), Postives = 93/161 (57.76%), Query Frame = 1 
Query:   25 LTDPDVEAAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            L++  V  A P+ +G ++R+F+++S N +NL +S  Q  W  +R +    N AFE  + V   FS+N + +FQGCA+MTSRI         + +  T      FSVKWL+LCEL ++  + ++N +N++  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  257 LSNQTVRTASPLPQG-QSRYFIVKSCNRENLEISVQQGMWATQRSNEAKLNEAFESTENVILIFSINKTRHFQGCAKMTSRIGGFVGGGNWKYSHGTAHYGRNFSVKWLKLCELSFNKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSEL 416
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A835QJ41_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QJ41_VANPL)

HSP 1 Score: 96.7 bits (239), Expect = 2.550e-19
Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 1 
Query:   25 LTDPDVEAAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            L   ++  A P+  G ++RFF+++S N +NL +S  Q  W  +R +    N AFE  + V   FS+N + +FQGCA+MTS+I         + A  T      FSVKWL+LCEL ++  + ++N FN++  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  245 LPSENIRTASPLPPG-QSRFFIVKSCNRENLEISVQQGVWATQRSNEAKLNEAFESTENVILIFSINRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFNKTHHLRNPFNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSEL 404
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A6V7PMN7_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PMN7_ANACO)

HSP 1 Score: 95.9 bits (237), Expect = 3.380e-19
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 1 
Query:   25 LTDPDVEAAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIELPKQVA 498
            L +     A P+ +G ++R+F+++S N +NL +S  Q  W  +R +    N AFE  + V   FS+N + +FQGCA+MTS+I         ++A  T      FSVKWL+LCEL ++  + ++N +N++  V  SRD  EL    G +L  LL+ +P+ EL   +A
Sbjct:  260 LPNQATRTASPLPQG-QSRYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESSENVILIFSINRTRHFQGCAKMTSKIGGFIGGGNWKSAHGTAHYGRNFSVKWLKLCELSFNKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELMAMLA 424
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BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A6A1WBG9_9ROSI (Cleavage and polyadenylation specificity factor CPSF30 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WBG9_9ROSI)

HSP 1 Score: 96.3 bits (238), Expect = 3.480e-19
Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 1 
Query:   49 AVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            A+P+ +G  +R+F+++S N +NL +S  Q  W  +R +    N AF+  + V   FSVN + +FQGCA+MTSRI         + A  T      FSVKWL+LCEL +     ++N FNE+  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  251 AIPLPQGM-SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILVFSVNRTQHFQGCAKMTSRIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSEL 402
[Close]
BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A2I4F8W7_JUGRE (30-kDa cleavage and polyadenylation specificity factor 30-like n=6 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4F8W7_JUGRE)

HSP 1 Score: 96.3 bits (238), Expect = 3.480e-19
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 1 
Query:   49 AVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            A+P+ +G  +R+F+++S N +NL +S  Q  W  +R +    N AF+  + V   FSVN + +FQGCA+MTSRI         + A  T      FSVKWL+LCEL + +   ++N FNE+  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  251 AIPLPQGI-SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSRIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHNTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSEL 402
[Close]
BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: UPI000901FC41 (30-kDa cleavage and polyadenylation specificity factor 30-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000901FC41)

HSP 1 Score: 95.9 bits (237), Expect = 4.660e-19
Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = 1 
Query:   46 AAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM--------EMRTAEVTVMEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            +A+P+ +G+ +R+F+++S N +NL +S  Q  W  +R +    N AF+  + V   FSVN + +FQGCA+MTSRI           E  TA      FSVKWL+LCEL +     ++N +NE+  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  249 SAIPLPQGT-SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSMENVILIFSVNRTRHFQGCAKMTSRIGGATKGGNWKHEHGTAHYG-RNFSVKWLKLCELSFQKTRHLRNPYNENLPVKISRDCQELEASVGEQLASLLYLEPDSEL 401
[Close]
BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Match: A0A7J7CQP0_TRIWF (30-kDa cleavage and polyadenylation specificity factor 30 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CQP0_TRIWF)

HSP 1 Score: 95.9 bits (237), Expect = 4.700e-19
Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 1 
Query:   49 AVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYVRRHSINPFNLAFEQGK-VFFFFSVNYSVNFQGCAEMTSRIPDM----EMRTAEVTV---MEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLLKLLWGQPEIEL 483
            A+P+ +G  +R+F+++S N +NL +S  Q  W  +R + +  N AF+  + V   FSVN + NFQGCA+MT++I         + A  T      FSVKWL+LCEL ++    ++N +NE+  V  SRD  EL    G +L  LL+ +P+ EL
Sbjct:  256 ALPLPQGI-SRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENVILIFSVNRTRNFQGCAKMTTKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFNKTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSEL 407
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10503.359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPL2_ECTSI1.740e-7252.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V1N4_9STRA8.530e-2745.21Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2I4GVF0_JUGRE1.870e-1937.8930-kDa cleavage and polyadenylation specificity fa... [more]
A0A4V4H3J3_MUSBA2.550e-1936.65Uncharacterized protein n=3 Tax=Musa TaxID=4640 Re... [more]
A0A835QJ41_VANPL2.550e-1937.27Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A6V7PMN7_ANACO3.380e-1935.54Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
A0A6A1WBG9_9ROSI3.480e-1939.22Cleavage and polyadenylation specificity factor CP... [more]
A0A2I4F8W7_JUGRE3.480e-1939.2230-kDa cleavage and polyadenylation specificity fa... [more]
UPI000901FC414.660e-1938.7130-kDa cleavage and polyadenylation specificity fa... [more]
A0A7J7CQP0_TRIWF4.700e-1937.9130-kDa cleavage and polyadenylation specificity fa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10503contigS-dermatodea_contig10503:790..7822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.0
Seed ortholog evalue3.6e-62
Seed eggNOG ortholog2880.D7FPL2
KEGG koko:K14404
KEGG Pathwayko03015,ko05164,map03015,map05164
GOsGO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009966,GO:0009987,GO:0010363,GO:0010467,GO:0010468,GO:0010646,GO:0010941,GO:0010942,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0023051,GO:0031123,GO:0031124,GO:0031323,GO:0031347,GO:0031349,GO:0031440,GO:0031974,GO:0031981,GO:0032991,GO:0034052,GO:0034641,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050684,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1900363,GO:1901360,GO:1901363,GO:1903311,GO:2000031,GO:2001023,GO:2001038
EggNOG free text desc.N6-methyladenosine-containing RNA binding
EggNOG OGsCOG5084@1,KOG1040@2759,KOG1902@1,KOG1902@2759
Ec32 ortholog descriptionDevelopment/cell death domain
Ec32 orthologEc-12_001020.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021
Hectar predicted targeting categoryother localisation
Exons5
Model size705
Cds size705
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10503.359.1prot_S-dermatodea_contig10503.359.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10503 790..7822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924160.6865888-CDS-S-dermatodea_contig10503:789..10501622924160.6865888-CDS-S-dermatodea_contig10503:789..1050Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 790..1050 -
1694079059.1184902-CDS-S-dermatodea_contig10503:789..10501694079059.1184902-CDS-S-dermatodea_contig10503:789..1050Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 790..1050 -
1622924160.6950839-CDS-S-dermatodea_contig10503:2765..28461622924160.6950839-CDS-S-dermatodea_contig10503:2765..2846Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 2766..2846 -
1694079059.1405232-CDS-S-dermatodea_contig10503:2765..28461694079059.1405232-CDS-S-dermatodea_contig10503:2765..2846Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 2766..2846 -
1622924160.709204-CDS-S-dermatodea_contig10503:4827..49501622924160.709204-CDS-S-dermatodea_contig10503:4827..4950Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 4828..4950 -
1694079059.1515439-CDS-S-dermatodea_contig10503:4827..49501694079059.1515439-CDS-S-dermatodea_contig10503:4827..4950Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 4828..4950 -
1622924160.7183511-CDS-S-dermatodea_contig10503:6058..61781622924160.7183511-CDS-S-dermatodea_contig10503:6058..6178Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 6059..6178 -
1694079059.1612124-CDS-S-dermatodea_contig10503:6058..61781694079059.1612124-CDS-S-dermatodea_contig10503:6058..6178Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 6059..6178 -
1622924160.7265792-CDS-S-dermatodea_contig10503:7702..78221622924160.7265792-CDS-S-dermatodea_contig10503:7702..7822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 7703..7822 -
1694079059.1732812-CDS-S-dermatodea_contig10503:7702..78221694079059.1732812-CDS-S-dermatodea_contig10503:7702..7822Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10503 7703..7822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10503.359.1

>prot_S-dermatodea_contig10503.359.1 ID=prot_S-dermatodea_contig10503.359.1|Name=mRNA_S-dermatodea_contig10503.359.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=235bp
SRFAGKDPLTDPDVEAAVPVKEGSKARFFVLRSLNHDNLAVSTVQNKWYV
RRHSINPFNLAFEQGKVFFFFSVNYSVNFQGCAEMTSRIPDMEMRTAEVT
VMEFSVKWLRLCELPYSSANQIKNSFNEDNLVGRSRDGMELNYESGRKLL
KLLWGQPEIELPKQVAEHAKTAAFSGVEVYRRPPPQPMGHTKMMRGSGEG
GTSGGLGGRNTLQLGPSQPQRPLGPPGFLFEIESQ
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mRNA from alignment at S-dermatodea_contig10503:790..7822-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10503.359.1 ID=mRNA_S-dermatodea_contig10503.359.1|Name=mRNA_S-dermatodea_contig10503.359.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7033bp|location=Sequence derived from alignment at S-dermatodea_contig10503:790..7822- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCGCGGTTTGCGGGTAAGGACCCCCTGACGGACCCCGACGTGGAGGCTGC
TGTGCCGGTGAAGGAAGGCTCGAAGGCGCGGTTTTTCGTGTTGCGGAGCC
TAAACCACGACAACTTGGCGGTGAGCGCGCTGTGCGCGGTGTGAGGCCCT
GCGGTCGTGCGGTCGTGGGTCGCCGCCGCCGCCCCCGCCGGTGCCGTCCG
CCGCCGCGGTACGATTCTGGGGCTGTAGTTTTGATGTATTTTGGCCCGTT
AGAAGAGGTGTTTTGGCCCTGATGATCGCTGAGTCGTGAGATTTTTGCTG
TGAAGTTGACTTGTGTAGCTCTTGTTGTTGTGGCTCTGTAATCGCGGCCA
GCTAAAAAGGAGTAGTGGGATGTCCAGCGGAAAAATTGGAGCTATCGCCA
CCGTGACTGGAACAATTTGAAGTTGGGGGGGGGGTTGTATGCGATAGAGG
AGGCGTGTATTTGGTCGTGAATGATTGCTGAGTTGTGAGTGTGTTGCGCG
AGCTTGTTGTTGCCCCGGTTTTGCTCTGGCTCGGAAAGTCACGTCCAGCT
AGGCGCCGCAATGTACATATCAGTGCTTGAGAGTGAAGAAAATGGCGCTG
AAGATTGCGGTCGTGAAGATTGGTCTGCCGGCAGAGCTACATAGAGCAGC
AGCGCGCTAGAGCGGTTCCTTCTCGGATATCGCTTGAGATATCGTGATGG
TGCTGTATGACCTCGATCAATCGCGAACAACCTTAGTGAGTTATTCCTTG
GGGTGGGTATTGGTTTCTTGCGGTGGATATCGCGAGCGCCGTGTTTTGCT
CTGGGGAGTTGAGCAAAGGAGTATGCACTATTTAGTTAAGATTCACACCA
GCACAATTTTTGTTTTCTTTTTTGCGGTGCGCTTAGCGTTCACGAACGTA
CTCTGCGGGCATTCTTCTTGTCCCGAGGCATTTCCTGAGGGGCTCTGGCC
AGGGGGGTGGGTAGAGACCCGGGTCGATATGCTAGAGGTTTCATGTATCC
CAGGGCAGCGGTCAAGCCTGTTATTGAAGATAAGACACACAATCTAGCAT
TTTATTTTCATGGAAACGGCGTGTGAAAGTAAACACGCAGGTGGTGACGG
AGTATACAGGCTCGAGTAGCGACGGAGTGTACAGGTTCGAGTAGCGAATA
GTAACAGGGCTCTACGTGTGCTCGGACGGCGTGTGTTGTTGTAGGAGAAC
ATCCCTCGACCGAGATTCGTGGGAGCGGGGTATGGCATGTCGAGCAGATC
TACATGGTACCTCTCTAGAGTCCATGCTCTCGAGCATCAATACTTTTTTG
TTACGATCACTGTAAGTATGGCGTCGCAATGTATTTGTTATCGCCGAAGT
CCCCCGATAATTTAAACGCCACCAACAGCAGCAACTGGCTTTAAGGGGAG
AGCGAAGCAGCTCTTCGCACCCCTGGTGCATGGTCGCTTGCAAGCCGGTT
GACTCGCACGGGCTTCGTCCTGCAGCGACTACAACTGTTCCTCGTTCACC
TCGCACTTTTCATCAGACCGTTGTGCTCATAATATTTCGGGTGATTCATG
ATGTTGGGGCCGGGCCGAGCCGGGCCCGAACATCAAACCTAACTGCCTGC
TTCGATTGCGCAAACCTAAGATATAATTATATACATGTATGTAGGTGAGC
ACCGTGCAGAACAAGTGGTACGTCCGGCGGCACAGCATCAACCCGTTCAA
CCTCGCATTCGAGCAGGGGAAGGTTTTCTTCTTCTTCAGCGTCAACTACA
GCGTCAACTTTCAGGTGTGTTGTCTTCTTTTGTGCGGTCTACGGTACGTA
CGCAGCGTCCTACCAACGTATATTAGCGTTGCCGCCTGGTCGCCAATTTC
TTGGGGGCGGGGGGGGGCTTTCGCGTGCGCCGGGGGGGAGGGTCTTCAGA
TTGACGAACCGAGGGCCAGGCTAAATGTGTTTGTGTGTGTGCTTATGTGC
CAAACCCGGACCTGTTAGGAAAAGGGGAACATGTAATTGTGGCAGGGCCG
AACCAGGTCAATGCTGAAAACGTTAAAAATCTAATGTACGACAGTAGCGC
CAAGGGGAAGACCGGCACTGGATGGTAATGTTAGAAGTGGTTACTGTCGG
AAGTACATACACATGATAGCTGAATTCTAAATCCAGCCCGTGAGGACGTG
ATGAACGAACGGGGCATCTGCAAATCCCGGGCATGTGAAAAAAAAGCCCG
TGTTCGCTTTCGGGTTGTTTGTCGCCCACCTTGGAAAGCACGCCCGGTGC
TCGTGACCTGAGCGGCTGCGTCGCTTTGCGGGAAGACTTGGTCGGGTTGG
GATCTTGCGATTTTTCGGGCTCGTGGTCGAGTCCTAACAAATTATGACGA
GGGTGTATTGCTTTGACCCCGTCATTTGCAACAGCGGTGGTAGAATGCCA
GGGCCGCTCGCGGCTGGAGAGCGCGTCATTCGCTGGCCGCTGGCGTTGTG
TGGACGGTGGGACACAATGGTGGGCCACACGTGAGTTTGGTGGCTCCTAC
GAAACGGCCGTCGCCCCCGCCCGCCTCCCAGTGCTCTGTGCCGTCGTCCG
TTGAATATATACCTGCCTCGCCAACCGTGCACTGCATATTTTCATCCTCG
TTTGAAACGTGCGGTTAGGATTATGCCGAAGGGGCGGCATGTAAATCGTA
CGCTACAACCGACCAGGCGAAACAAAAGTGCTCGGGTACATACGTACAAC
ACAGCTCCGTGTTTGCATCATTGCTTTTTCACTGCTGTCGCCGTATCATA
CAACTTACAAAACGTCGGCAAAACAAAAACAGAGGATTTGTCATAAAACT
CACTCCCCGCGCTCTCTCTTTTTTGTCCGTGCTGTTTTCGCGACGGTCCC
TACCTATATCTCCCTCCCTCAGGGGTGTGCCGAGATGACGTCACGCATTC
CCGATATGGAGATGCGGACCGCGGAAGTTACGGTCATGGAGTTCTCCGTC
AAGTGGTTGCGGCTGTGCGAGTTGCCTTACAGCTCCGCCAATCAGGTAGG
CGTGCTGTATGTGTGCCGAAGTGTATAGACGCATGCAAGTAGCAAGCACA
AGTTTCTTGTACACCTGGTGATATTTAGTCTTAAGAAAAGGTACACTTCG
GAAGCGACTTCTCGGATGAGGTAAAGAGCGACCATAAAAAAAGCGCCTTT
TGTTTTTTGCCACGACTTTTTCTCGGCATCCGAAGGCTGAATGAATGATG
AATTAATGAACTACAGTACATCGGCAAGCGCTCCTGTATCTCCGTACCGG
CGAAGCAAGCCAGGAATGCGAACAGCGTTATTTGGTGGGGAAAAAGTGAC
AGTTGCCTTCGTGGAGCAACTTCCTTTGCGAATTTTTATGCTAAAACAAA
TTTACTGAACATGCTAGATCGGGTTGTATTTGTTATGCTGTGATACGTTT
ACGTTCCTTTGGTGCACCCTATGACCCTGGTACAAATGGAGCTTTGACGT
GCAGCCCGGCCTTGCGTGTGCTGGTGTGAATGAAGGCTACGAGTGTTATG
TTTACTTTAGTTTCGAGGAACGGGTAACCATGTACCCCAGCCCCCTCGGA
TGGTCGCAAGAAAGTCAGGCGAAAAAAATGCGTGTTTTCGTGGTCGCTCT
TGACCTCCGCGAAGTCGCTTCCAAAGCGTACACCTCTGCTCCTAGACTGT
CACCATACCGAACCGGCGGGAGGTTGGGGGGGGGGGGGGGGGGGGTGGCT
CAAAACGAACAAAAAAGCCAGGGAGAGGGGGGGGGGCTCGGGCAAAAGGA
TAAAAGGTTCCGCGAAAATTGCTCTTTTTTTTGTTGCAAANNNNNNNNNN
GGGGGTGCGGGCGGGGCGGGGGGGGGGGGGGGGGGCGGCGGGGGGGGGTC
TGACTGGCGGGCTTTCTCGCGGGGGTGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGTTGGCTCACAAAGGACATCAAAGCTACGCTACGAG
GATGTCGCTCAGGACAAAGGTGTACCTGTTCCGGCACAATGTCCTAATTT
TTTCGTGCAGAACGAATGTACCGAGCGCTGAACCAAAAGCCCATTTTGAT
TCATAAAACTAAACTTAAGTGTTTCGGATGGCGTGAAAGTTAAACGTTTT
CCACTGAAATCGCTGCGATGACGGGAAGTGCTGGACCAGGTGGAAACGTT
TGCGCAAAATTCAATCGTACGGAGGGGCGGAGGGAGGGGGGGGGGTGGGG
GGGGGGTAGGATGGAACTCGAGGCCCTGGGAGAAATGTAGACAGCTGCAG
GTCGAACACGCAATTGTACAAACGCACACGTACGTGGGAGCGGGGTATTG
AGAGGGACATCGTAGAGTGGGGGCTGCGGGAAGTCGAACAATTGATGAAG
AAAGTGCTCAGTGTGCGTGGGGGTTCTTGGAGCTGGTGTTTGGTCTCCGG
TGGGAAGGCTAGTGCGATCGCGGAATAGGGTTGTCTAGTTGTATTGTGCG
GAGTTGATGCGTTAGCGATGGCGTGGCTGTAGCAGATGGAAACGAGTCCC
ATCGCGTTAAACGCATCATACGAGTACCAATTCGCGATTTTTGGGGGCTT
GTTGCTAATTTGCGCCGCGCGAGCTAGGGCCGCGGTCAGGCGTGCAATCG
TTGCCGCGGTGGAAACCTCAGCGGTGTTTGTTCGTTGTTCGTTGGTCGTG
CCAAGAAGGTGCGCCCACGGAGTTTCCCATTTTTGATGAGAATAAACCCC
TCCTCCGCCTCCCTCTTAATTTTTTTGTGGTGCTTTAACACAAAAAATTA
TTGTAGGGGCTGTAGGCCGTGCGCTTAACCTCGCCCGTCCGCACCGCCTA
CTGTAGCAAGATTCGCAACACCTGACGATTCCATGAGATTGGTTGCTGTG
AGCGCAAGAGTCACCGGCATCGCGTTATCTTAGAGATCTTTACGGCTGTG
GCGTGAACCTTCCTTCCTCTTACATCTCCACCCCCCCTACCCCCCAACCA
CCACCCCGTCTTTGCCTCCCGCTCAGATCAAGAACTCTTTCAATGAGGAT
AACCTTGTGGGCCGCAGCAGAGACGGCATGGAGCTCAACTACGAGAGCGG
AAGAAAGGTGCGTGCGTGTGTGTGTTTGTGTGCTCGTGCGCGTGTGCGGA
GTGCGGGGTGCGGGGTGCGTGAGTGCCTCTGCCCTGAGTCTTTCGTATTT
TCCCTGGTTTGCCCCTCCTCGCTTGCTTGCGGCGGTTGTCCTTGATCTCG
ATAAGAGGGGGTGCCGAGCGCTGGAGCACAGAGAAACCGTCGGTGTAATC
ACAGAGTTTAATTCAAACGGATGAGGCCGACCCGGCTTGTCGGATTCGCA
CAAGAAAAATAACCAAGGGGGGGAGAGAGCTCTATGTTTTTGAATCCTAA
GTTTTTGGGGGAGAACGAGATCATAAATCTACTTTTACACACAAACATAG
ACTACGTGTTAATAGTTCAAAAACACACAGGCGCACGCGCACCAGAAAAA
CCAGACGATGGTCCGATTCGACCTCTGCATGGCACAAAGGTAGGATTAAT
AACAGTCGTGGTAAACAAATGCCCGGTATTTTCCTATCATGTTCTGTCTC
TGAAGGCTTGTGTTGTGGCACCGGTATTATAGCATTTTTCCAAGCCTGGG
CTCGGCTGCCCTCTTCTTCCCTGAGCACCAGCAGCAGCGAGCGGGTGTCG
CCGAGCGGGCGTCACTATTTTGTTGCTCATCGTTCCTGCTGGGCTGTTGA
AAGGGTACGTTACTGCCCTCCCTCGCCGACCAACCCAGTTGAGACTTTGA
ACTCAACACTCTGCACAAGACGAGCAGCCTGTGTGTTACAGCGAGTGTGC
CAGCAATGCTGGTGGGAGAGCAACGTGACGCGGTTTCCTCTGCAGCGGTG
CAGGCGGCCTGGATCTCGCGCAACGGCGAGTGCATGCCCGCGCGCGCAGC
ACGTGCTTACCTCCCTGCTTAGAGCAGCGCTAGAGCTCTACAGTAAATGT
GACGAAAACAAGCAACTTATGATTTTGGTCCCCTCGAAAAGGGGCCGGCG
ATGAAGGGTAGAACGATCGTGCCCATTTTTGGTTTTGGACGTTTCCAACT
CGGTATTTTATGGCGCTTCCATCGAAAGGGTTCCGCGGGTGCCTCGACAG
GTTTTGAGCGTGTGGCTTCTATAATGGTCGCTCGATGTCCCGCACTAAGC
GGAATTAACGCAAATGCGTGAGTGGATATCCTCGCAGACTGCTGCAGCCG
ACCGATGCTAGATCGGCTTAAGTACGACCTGGTAAGAGATCAGCACCCGA
AGTCGGCTTCGCCAGTGTGAACACTTCCTCCGACCTCGCCAGACAAAAAT
CATTTTTCTACCAGTCCGAGACAAACCTCATTATCTGAGGTTGTAGAGCT
TGCTGCGACCCGACGAAAGCACACGAAGCACAGGCCATTCGCTAGGCTCC
TCGTTGCCTACAACGGTGTACCTGGTAGTTGTTTATCATAGCGAGGGGAG
AGACGTTCGACTCTTCCTCTCTTGGCTTGTCTGTACTGTACTGCTGTACG
GGAGCAAGAGCAAAAGCAACCTCCCCGCGCAGAGGTTGTTCACGCCGCCG
CCCGCGCCCGCGCGCGCGAAGATCCTGCCGCTGTCGAATACAAAGCAGCC
CGGCTAGCGAAGGACAGGGGCGAACCTCGTTCGAAGCGCCGTATGGGCAC
TTGAGTAACACAACGACGCCTCGTCTCTTCCGACACCACTCTCTGCACCA
GCGAAGCACTTCCTTCCCCCTCTGCCAACCCCCTCCAACCCCCCCCCCCT
CCGCCCCGCTTCCATACATCAGCTTCTCAAGCTGCTCTGGGGACAGCCAG
AGATCGAGCTCCCGAAGCAAGTCGCCGAGCACGCAAAGACCGCTGCGTTT
TCCGGGGTGGAAGTGTACCGTCGACCTCCTCCGCAGCCAATGGGACATAC
GAAGATGATGCGGGGGTCTGGCGAGGGAGGAACGAGCGGGGGGCTGGGCG
GCAGGAATACGCTGCAGCTCGGGCCGTCGCAGCCTCAGCGACCCTTGGGT
CCTCCCGGATTTCTCTTCGAGATTGAATCCCAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10503:790..7822-

>mRNA_S-dermatodea_contig10503.359.1 ID=mRNA_S-dermatodea_contig10503.359.1|Name=mRNA_S-dermatodea_contig10503.359.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at S-dermatodea_contig10503:790..7822- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCGCGGTTTGCGGGTAAGGACCCCCTGACGGACCCCGACGTGGAGGCTGC
TGTGCCGGTGAAGGAAGGCTCGAAGGCGCGGTTTTTCGTGTTGCGGAGCC
TAAACCACGACAACTTGGCGTCGCGGTTTGCGGGTAAGGACCCCCTGACG
GACCCCGACGTGGAGGCTGCTGTGCCGGTGAAGGAAGGCTCGAAGGCGCG
GTTTTTCGTGTTGCGGAGCCTAAACCACGACAACTTGGCGGTGAGCACCG
TGCAGAACAAGTGGTACGTCCGGCGGCACAGCATCAACCCGTTCAACCTC
GCATTCGAGCAGGGGAAGGTTTTCTTCTTCTTCAGCGTCAACTACAGCGT
CAACTTTCAGGTGAGCACCGTGCAGAACAAGTGGTACGTCCGGCGGCACA
GCATCAACCCGTTCAACCTCGCATTCGAGCAGGGGAAGGTTTTCTTCTTC
TTCAGCGTCAACTACAGCGTCAACTTTCAGGGGTGTGCCGAGATGACGTC
ACGCATTCCCGATATGGAGATGCGGACCGCGGAAGTTACGGTCATGGAGT
TCTCCGTCAAGTGGTTGCGGCTGTGCGAGTTGCCTTACAGCTCCGCCAAT
CAGGGGTGTGCCGAGATGACGTCACGCATTCCCGATATGGAGATGCGGAC
CGCGGAAGTTACGGTCATGGAGTTCTCCGTCAAGTGGTTGCGGCTGTGCG
AGTTGCCTTACAGCTCCGCCAATCAGATCAAGAACTCTTTCAATGAGGAT
AACCTTGTGGGCCGCAGCAGAGACGGCATGGAGCTCAACTACGAGAGCGG
AAGAAAGATCAAGAACTCTTTCAATGAGGATAACCTTGTGGGCCGCAGCA
GAGACGGCATGGAGCTCAACTACGAGAGCGGAAGAAAGCTTCTCAAGCTG
CTCTGGGGACAGCCAGAGATCGAGCTCCCGAAGCAAGTCGCCGAGCACGC
AAAGACCGCTGCGTTTTCCGGGGTGGAAGTGTACCGTCGACCTCCTCCGC
AGCCAATGGGACATACGAAGATGATGCGGGGGTCTGGCGAGGGAGGAACG
AGCGGGGGGCTGGGCGGCAGGAATACGCTGCAGCTCGGGCCGTCGCAGCC
TCAGCGACCCTTGGGTCCTCCCGGATTTCTCTTCGAGATTGAATCCCAGC
TTCTCAAGCTGCTCTGGGGACAGCCAGAGATCGAGCTCCCGAAGCAAGTC
GCCGAGCACGCAAAGACCGCTGCGTTTTCCGGGGTGGAAGTGTACCGTCG
ACCTCCTCCGCAGCCAATGGGACATACGAAGATGATGCGGGGGTCTGGCG
AGGGAGGAACGAGCGGGGGGCTGGGCGGCAGGAATACGCTGCAGCTCGGG
CCGTCGCAGCCTCAGCGACCCTTGGGTCCTCCCGGATTTCTCTTCGAGAT
TGAATCCCAG
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