mRNA_S-dermatodea_contig1004.35.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 357 bits (916), Expect = 1.540e-121 Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAIPKGDSIHARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWE--ETEM 519
MYVFDLQLHRWERA+PKGDSIHARASFGMCQGPTP TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRW+KL TTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWE ETEM
Sbjct: 76 MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEM 250
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 303 bits (775), Expect = 5.430e-100 Identity = 139/173 (80.35%), Postives = 153/173 (88.44%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAIPKGDSIHARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEETEM 519
+YVF+L+LHRW + KGD+ RASFGMC GP P T+IVAGGTGVEMDSLRADVVEYN RTWT +LTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHY+NDLFEYNV +N+WK+LVT+GR PSPRYKHQAV VG KMYVIGGGCFKPEQS IDLYCLDL++LVWEET M
Sbjct: 81 VYVFNLELHRWSKVTVKGDAPLPRASFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTM 253
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.970e-84 Identity = 120/174 (68.97%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAIPKGDSI-HARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEETEM 519
MY FDL HRWE KGDS+ ARASFGMC GP +T+IVAGGTGVEMDSLR+DV+E++TRT+ W+ + D E+ P +FYGQ+VC YG LLLFGGSTGLHY+NDLFEYN+ +N W+KL TTG++PSPRYKHQAV VGD MYVIGGGCFKPEQ++IDLY LDL+TLVW+ M
Sbjct: 74 MYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAM 247
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 258 bits (658), Expect = 2.950e-82 Identity = 116/171 (67.84%), Postives = 141/171 (82.46%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAIPKGDSIHARASFGMCQGPTPS-TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEE 510
+Y FDL H+W G+ RASFGMC P+P +++VAGGTGVEMDSLRAD+VE++TRTR W V+TDSEETPC+FYGQS+CTYG++LLLFGGSTG+HY+NDL+EYN + RW+KL TTGRKP+PRYKHQAV VG MYVIGGGCFKPEQS+ID++ LDL TL W+E
Sbjct: 65 VYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDE 235
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 252 bits (643), Expect = 6.390e-80 Identity = 116/171 (67.84%), Postives = 139/171 (81.29%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAIPKGDSIH-ARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEE 510
MY FDL H WE +G+ + ARASF MC GP T+IVAGGTGVEMDSLR+D+++++TRTR W + D ++ P KFYGQ+VC YGD LLLFGGSTGLHY+NDLFEYNV +N W+KLVT GR+PSPRYKHQAV VGD MYVIGGGCFKPEQS+ID+YCL+L+TLVW +
Sbjct: 79 MYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQ 249
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.290e-44 Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 7 VFDLQLHRWERAIPKGDSIHARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEE 510
VFD W +G+ HARASFGM +GP P T+IVAGGTG +MD+ +D+ EYN + TW ++ + CK+YGQS+C Y NL FGGS G YSN L+ Y+ + TTG+ P PRYK Q + V D + VIGGG ++P ID++ LDL TL W +
Sbjct: 80 VFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPGTLIVAGGTGQDMDTF-SDIYEYNISSSTWRLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQ 246
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A7S2UXB8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB8_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.740e-42 Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAIPKGDSIHARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEETE 516
M DL+ G RASF +C+GP T+IVAGG G L +D++E++ + W ++ T+ CK YGQSV Y +L+ FGG+TG YSND+++++ + W L TTG +PSPRYK + V +G KM++IGGG F+P+ +S+D++CLDLKTL W E +
Sbjct: 88 MMAVDLETMECRDIHVTGVKPRPRASFAICEGPLDGTIIVAGGAGPNR-VLYSDILEFHVGSNKWRTLATEGTTPFCKCYGQSVRAYKSSLIFFGGTTGERYSNDVYQFDTRTGHWICLETTGNQPSPRYKQEMVIIGSKMFIIGGGNFRPKSTSMDMFCLDLKTLKWTEVQ 258
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A7S3ULU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3ULU8_HETAK) HSP 1 Score: 146 bits (368), Expect = 2.810e-40 Identity = 74/169 (43.79%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 10 FDLQLHRWERAIPKGDSIHARASFGMCQGPTPSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLT-DSEETPCKFYGQSVCTYGDN-LLLFGGSTGLHYSNDLFEYNVCSNRWK-KLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWE 507
F+L W + +G + RASF MC+G P T+I+AGGTG E + D+ EYN RTR W ++ D + C++YGQ+ C +GD L+LFGGS+G Y++ L+ +++ + R+ + TTG +PS RYKHQAV VGD++YV+GGG +KP +D++ LDL WE
Sbjct: 49 FNLSTLTWSKVQAEGTTPSPRASFEMCRGCLPDTLIIAGGTGSE--GICGDMHEYNARTRRWRQLVARDDPGSRCRYYGQTACPWGDRTLVLFGGSSGHEYTDHLYTFDLETLRFAGPVATTGDRPSARYKHQAVVVGDELYVLGGGAYKPTAPQLDIFRLDLTRWHWE 215
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA) HSP 1 Score: 143 bits (361), Expect = 7.240e-38 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 1
Query: 115 IVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVW 504
+++GG G + D LR+D+ ++TRTRTWT +L + P GQS C + +L FGGSTGL YSN+LF Y++ +NRW++L T G +P+PRYKHQA D MYV+GGGCFKP D++ LDL T+ W
Sbjct: 40 LLSGGAGDDPDHLRSDLYMFDTRTRTWTMLLEGDDAKPFCLCGQSACCWRGTVLFFGGSTGLEYSNELFSYDLRTNRWQQLATKGPRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLTMEW 169
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Match: A0A7S3YJ05_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJ05_HETAK) HSP 1 Score: 137 bits (344), Expect = 1.620e-35 Identity = 76/171 (44.44%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 10 FDLQLHRWERAIPK--GDSIHARASFGMCQGPT--PSTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETP----CKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWKKLVTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTL 498
+D+ RW R + + G+S RASFGMC+GP P T++VAGGTG L DV E++TR R W + P C YG SV + LL FGGSTG Y+ + ++ RW +L TTG PSPRY+HQA VGD+++V+GGG +KP +D+Y LDL+TL
Sbjct: 233 YDIDRRRW-RVVRQNGGESPPGRASFGMCRGPDTRPDTLVVAGGTGNA--GLCRDVWEWHTRLRQWRRLEGPDNGLPAGEACNAYGHSVAAHRGGLLFFGGSTGYGYTARAWAFDPERRRWARLATTGPAPSPRYRHQAAVVGDRLFVLGGGNYKPCAPHLDVYVLDLRTL 400 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1004.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1004.35.1 >prot_S-dermatodea_contig1004.35.1 ID=prot_S-dermatodea_contig1004.35.1|Name=mRNA_S-dermatodea_contig1004.35.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=175bp MYVFDLQLHRWERAIPKGDSIHARASFGMCQGPTPSTVIVAGGTGVEMDSback to top mRNA from alignment at S-dermatodea_contig1004:7314..7838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1004.35.1 ID=mRNA_S-dermatodea_contig1004.35.1|Name=mRNA_S-dermatodea_contig1004.35.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=525bp|location=Sequence derived from alignment at S-dermatodea_contig1004:7314..7838+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1004:7314..7838+ >mRNA_S-dermatodea_contig1004.35.1 ID=mRNA_S-dermatodea_contig1004.35.1|Name=mRNA_S-dermatodea_contig1004.35.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1050bp|location=Sequence derived from alignment at S-dermatodea_contig1004:7314..7838+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |