mRNA_S-dermatodea_contig10411.300.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: D7G421_ECTSI (Acyl-CoA thioesterase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G421_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 9.650e-158 Identity = 235/296 (79.39%), Postives = 256/296 (86.49%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWAD--DDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREG---KQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTKQG 873
++IGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVL+RHP LDCDITLMGRVVWTGRSSMVINMR C++SAPGVCYVGDD WAD DDSCWLDANFTFVARDRETG SRAVSPLDLG D + P D + P+ GW+ALWR V +HK RQALER AAKKG A+E F+ +EAAR+KRE+EA+ LVAAGFPLLHLPALA+PHAVL+ QT SSTLICMPQHRNTANRIFGGFLMHRAYEV FCAAF FGGSRP FSEIDEVVFLQPVDVGDLV +DA +LYTK+G
Sbjct: 150 VRIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSMVINMR---CSTSAPGVCYVGDDPWADGDDDSCWLDANFTFVARDRETGRSRAVSPLDLGTDPLQDEPGDGSDGSPGERDPEHGWRALWRVVHSHKSRQALERNAAKKGAAAEGFLEVEAARLKREQEASTLVAAGFPLLHLPALANPHAVLMSQTLTSSTLICMPQHRNTANRIFGGFLMHRAYEVAFCAAFTFGGSRPRFSEIDEVVFLQPVDVGDLVKMDACILYTKEG 442
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A835Z9W3_9STRA (Putative acyl-CoA thioesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W3_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.120e-60 Identity = 130/297 (43.77%), Postives = 167/297 (56.23%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSEDPS------FPLLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTKQG 873
++I R+LEDLDALA IA +HC+ + S +P+LVTASVDRI +K+ P L+ D+ L G +VWTGRSSM I M S P A S WL+A FTFVAR R+TG S + PL + E EA +R Q DR+ L R + + + + E AA L+ G L +P LADP +VLV TA SS ++CMPQ RNTANRIFGGFLM RA E+GF A+ G+ P + +DEVVF QPVDVGD++ LD+ VL T+ G
Sbjct: 80 IRISRVLEDLDALAATIAMEHCATECSAHGVTFWPMLVTASVDRIEMKQQPMLERDLVLSGHIVWTGRSSMQILMHCAVAQDSTPAAEDAAATAAAAAPSPWLEARFTFVARSRDTGRSTPIPPLLIETPKEDEA------------------FRHAQRAMDRKKLLRSGGGGATLAGANGTAPVSSPEAEAAAAALLREGRLLKAMPCLADPRSVLVGDTAQSSVIVCMPQERNTANRIFGGFLMGRALELGFATAYTTVGAVPFTAVVDEVVFHQPVDVGDILKLDSCVLQTRAG 358
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: W7TVW1_9STRA (Thioesterase superfamily n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVW1_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.650e-59 Identity = 117/288 (40.62%), Postives = 160/288 (55.56%), Query Frame = 1
Query: 10 GRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTKQG 873
G++LED+DALAGN+AFKHC +D PLLVTASVDRI L +P+LD D+ + GRVVWTG SSM I++ + P W+ A+FTFVAR +T + A++ L AE E + ++ ++ RK +K +E +L++ V E L++ PL+ +P LADP VLV T S++ I PQ RN NR+FGGFLM RAYE+ + ++F GSRP F ++ V F PVDVGDL+ DA+VLYT G
Sbjct: 114 GKLLEDMDALAGNVAFKHCEKDGKVPLLVTASVDRIRLSSNPKLDRDMEMTGRVVWTGSSSMQIDLEVHALPDAKP----------------WISASFTFVARHPQTAKATAINKLKPESAAERETFSAVEQKNQR----------------------RKTVRKAKGTEGSPSLKSGAVDVETMIKLLLSQARPLMEMPCLADPTCVLVDNTRASNSSIMQPQQRNMLNRVFGGFLMRRAYEIAYSTCYLFAGSRPEFFQVAHVDFTSPVDVGDLMRFDAAVLYTHTG 363
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A2R5FZT5_9STRA (Acyl-coenzyme A thioesterase 9, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZT5_9STRA) HSP 1 Score: 196 bits (499), Expect = 4.500e-56 Identity = 128/299 (42.81%), Postives = 175/299 (58.53%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCS---EDPSFPLLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPAD--ARREGKQPQDGWKALWRRVQAHKD----RQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTKQ 870
+++G ++EDLDALAGN+AF+HCS +D S +LVTASVDRI + L+ D+ L G V W G SSM I M+ + S P +L+A FTFVARDR TG +R ++PL + E PA+ A G++ D K + ++ HKD R LE A + S+ + + E+ A L P L +PA+A +AV + +T LS+T I PQ RNTA RIFGGFL+ RAYE+ F A++FGG+ P FSE+DEVVF PVDVGDLVH ++ VL+T +
Sbjct: 113 IRVGNVIEDLDALAGNVAFQHCSANHQDMSSTMLVTASVDRITMLHRASLEDDVKLSGCVSWVGTSSMEIKMQALSSWSQEP----------------FLEALFTFVARDRVTGRARRINPL------KPETPAEKAAFEAGRKRADHRKQMRKQ---HKDAKFYRSYLEDVLASELKDSDEAITI-------EQAANALYNNAKPRLFMPAIALKNAVRLSETRLSNTFIMQPQERNTAGRIFGGFLVRRAYELAFATAYVFGGAVPRFSEVDEVVFRTPVDVGDLVHFESCVLFTSK 379
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A2G5DDK4_AQUCA (Uncharacterized protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DDK4_AQUCA) HSP 1 Score: 192 bits (489), Expect = 4.250e-55 Identity = 124/298 (41.61%), Postives = 169/298 (56.71%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSEDPSFP---LLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGV--CYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQA----HKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTK 867
++IG++LEDLDALAG I+FKHCS+D + LLVTASVDRIVLK+ R+D D+ ++G V W GRSS+ I + E PG C + +DD A L ANFTFVARD +TG S V+ L + ++E K L+ ++A K ++ + +KG +E AL +A G +PALA+ ++L++ T L ++LIC PQ RN RIFGGFLMHRA+E+ F A+ F G P F E+D V FL+PVDVGD + A VLYT+
Sbjct: 108 VRIGKLLEDLDALAGTISFKHCSDDNNTTRPLLLVTASVDRIVLKKPIRVDTDLKIVGAVTWVGRSSIAIQL--EVIRQDTPGEDSCIISEDDIA------LTANFTFVARDSKTGKSAPVNRLS----------PETQQE--------KKLYEEMEAIDILRKKKRGGHGRELEKGEETERLNAL--------------LAEGRIFCDMPALANRDSILIKDTRLENSLICQPQQRNIHGRIFGGFLMHRAFELAFSTAYAFAGLMPCFHEVDHVDFLRPVDVGDFLRFKACVLYTE 365
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A1Y1ICQ3_KLENI (Acyl-CoA thioesterase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICQ3_KLENI) HSP 1 Score: 194 bits (493), Expect = 1.710e-54 Identity = 123/293 (41.98%), Postives = 170/293 (58.02%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSE-DPSFP--LLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTKQ 870
+++GR+LEDLDA+AG++AF+HCS+ DP LLVTASVDRI L RH R+D D+ + G+V W GRSSM I +R + +SA D L ANFTFVARD T + A++PL AP A KAL+ A + + RK +K A + EA ++ + +AAG +L LPALAD +++L+R T L + +C PQ RN RIFGGFLM RA+E+ F ++F G+RP F E+ ++ F +PVDVGDL+ + VLYT+Q
Sbjct: 213 MRVGRLLEDLDAIAGSVAFQHCSDNDPETRPLLLVTASVDRIRLARHIRMDADLAVTGKVTWVGRSSMEIQIRLDQPNASAEQP----------DSRPPLVANFTFVARDITTNKAAAINPL---------APDTAEE---------KALF----AEGEARDAARKVRRKSGAGKD----EALTKEQRDRMEAFLAAGRTMLELPALADRNSMLIRDTRLENAFLCQPQQRNMHGRIFGGFLMRRAFELAFSTCYVFCGTRPAFLEMHDITFQRPVDVGDLLRFKSCVLYTEQ 469
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A8J5XK14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XK14_DIALT) HSP 1 Score: 191 bits (484), Expect = 2.580e-54 Identity = 122/289 (42.21%), Postives = 164/289 (56.75%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCS-EDPSFPLLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYT 864
++IGR+LEDLDALAG IAFKH P +LVTASVDRI L + D+ L G V W GRSSMV+ + + + GV + G W L+A+FTFVARD T S + PL+L +AE +A++ RV A +R +R A P +++ A A+LVAA P + +PAL+DP VL+ T ++ +C PQHRNT +RIFGG LM RA+E+ + AF+F GS+P F E+D V F+ PV+VGDL+ DA VLYT
Sbjct: 92 VRIGRVLEDLDALAGTIAFKHTRPRAPKHLMLVTASVDRIALLHNCDTASDMRLSGYVAWVGRSSMVLKLN-----AYSDGV-FGGAQPW-------LEADFTFVARDPATQKSAPIDPLELRTEAE------------------RAIFSRVAAKVERDRAQRAAP---PCAQANAAA----------TAQLVAAALPAVLMPALSDPTTVLMSDTRQTNAFVCQPQHRNTQDRIFGGLLMRRAFELAYATAFLFSGSKPQFIEVDRVQFVAPVEVGDLLMFDARVLYT 336
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A5B7C396_DAVIN (Uncharacterized protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7C396_DAVIN) HSP 1 Score: 195 bits (495), Expect = 2.790e-54 Identity = 125/294 (42.52%), Postives = 166/294 (56.46%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSEDPSFP---LLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMR--QETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTK 867
+++G++LEDLDALAG I+FKHCS D S LLVTASVD++VLK+ R+D D+ ++G V W GRSSM I + Q T +S P DS L ANFTFVARD +TG S V+ + + E K LW +A ER +K E+ +E V R +E L+A G +PALAD ++L++ T L ++LIC PQ RNT RIFGGFLM RA+E+ F A+ F GS P F E+D V FL+PVDVG+ + + VLYT+
Sbjct: 283 IRMGKLLEDLDALAGTISFKHCSNDDSTTRPLLLVTASVDKMVLKKPIRVDTDLKIVGAVTWVGRSSMEIQLEVIQSTEETSQPS------------DSLALVANFTFVARDSKTGKSALVNQISPETEQE------------------KLLWE--------EAEERNKMRKKKRGENKKEIEDGVVNRLKE---LLAEGRIFCDMPALADRDSILIKDTCLQNSLICQPQQRNTHGRIFGGFLMRRAFELAFATAYAFAGSAPCFIEVDHVDFLRPVDVGNFLRFKSCVLYTE 535
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A830C4G5_9LAMI (Acyl-coenzyme a thioesterase 9 mitochondrial n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C4G5_9LAMI) HSP 1 Score: 188 bits (478), Expect = 1.070e-53 Identity = 118/294 (40.14%), Postives = 167/294 (56.80%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSEDPSFP---LLVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMR--QETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTK 867
+++G++LEDLDALAG I+FKHCS + S LLVTASVD++VL++ R+D D+T+ G V W GRSSM I + Q + SS P D+ L ANFTFVARD +TG S ++ + + E K+LW + +R L +K KKG + E R+ +L++ G +PALAD ++L++ T L ++L+C PQ RN RIFGGFLM RA+E+ F A+ F GS P F E+D V FL+PVDVG+ + ++ VLYT+
Sbjct: 67 IRLGKLLEDLDALAGTISFKHCSSEDSSTRSLLLVTASVDKMVLRKPIRVDTDLTIAGAVTWVGRSSMEIQLEVTQPSEESSDPS------------DAVALTANFTFVARDSKTGKSTIINQISPETEKE------------------KSLWEEAE---ERNKLRKK--KKGEQKKEINDEEKNRL------GELLSEGRVFCDMPALADRDSILIKDTCLQNSLMCQPQQRNIHGRIFGGFLMRRAFELAFATAYSFAGSAPCFHEVDHVDFLKPVDVGNFLRFNSCVLYTE 319
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Match: A0A8B8L516_ABRPR (acyl-coenzyme A thioesterase 9, mitochondrial-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8L516_ABRPR) HSP 1 Score: 189 bits (480), Expect = 1.360e-53 Identity = 126/292 (43.15%), Postives = 172/292 (58.90%), Query Frame = 1
Query: 1 LQIGRILEDLDALAGNIAFKHCSEDPSF--PL-LVTASVDRIVLKRHPRLDCDITLMGRVVWTGRSSMVINMRQETCASSAPGVCYVGDDDWADDDSCWLDANFTFVARDRETGLSRAVSPLDLGGDAEHEAPADARREGKQPQDGWKALWRRVQAHKDRQALERKAAKKGPASESFVALEAARVKREEEAAKLVAAGFPLLHLPALADPHAVLVRQTALSSTLICMPQHRNTANRIFGGFLMHRAYEVGFCAAFMFGGSRPTFSEIDEVVFLQPVDVGDLVHLDASVLYTK 867
++IG++ EDLDA+AG I+FKHCS++ S PL +VTASVD+IVLK+ ++ D+ ++G V+W GRSS+ I M V +DD D DS L ANF FVARD +TG + V+ +P A K L+ + +A R L+RK K+G + F E VKR E L+A G +PALADP ++L+R T+L ++LIC PQ RN RIFGGFLMHRA+++ F A+ F G P F E+D V FL+PVDVGD + L + VLYT+
Sbjct: 93 VRIGKLFEDLDAIAGTISFKHCSDEASTTRPLRVVTASVDKIVLKKPISVNIDLKIVGSVIWVGRSSIEIQME----------VTQPNEDD-NDLDSVALTANFIFVARDSKTGKAAPVNRF---------SPETAHE---------KFLYEQAEA---RNNLKRK--KRGGGKKEF---ENGEVKRLET---LLAEGRTFCDMPALADPDSILLRNTSLENSLICQPQQRNIHGRIFGGFLMHRAFDLAFSTAYAFAGLVPCFLEVDHVDFLRPVDVGDFLRLKSCVLYTE 344 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10411.300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10411.300.1 >prot_S-dermatodea_contig10411.300.1 ID=prot_S-dermatodea_contig10411.300.1|Name=mRNA_S-dermatodea_contig10411.300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=292bp LQIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLKRHPRLDCDback to top mRNA from alignment at S-dermatodea_contig10411:1576..7983+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10411.300.1 ID=mRNA_S-dermatodea_contig10411.300.1|Name=mRNA_S-dermatodea_contig10411.300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6408bp|location=Sequence derived from alignment at S-dermatodea_contig10411:1576..7983+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10411:1576..7983+ >mRNA_S-dermatodea_contig10411.300.1 ID=mRNA_S-dermatodea_contig10411.300.1|Name=mRNA_S-dermatodea_contig10411.300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1752bp|location=Sequence derived from alignment at S-dermatodea_contig10411:1576..7983+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |