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Homology
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: D8LDI0_ECTSI (Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI0_ECTSI) HSP 1 Score: 261 bits (667), Expect = 6.710e-75 Identity = 124/140 (88.57%), Postives = 134/140 (95.71%), Query Frame = 1
Query: 1 QSLTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESVSS 420
+++ + +KVFWKRCRELADH KIMEKIEKGEKRIFRSKQIR+AID+KV+RHANPW DLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELE+ +
Sbjct: 899 ENVRKYIKVFWKRCRELADHPKIMEKIEKGEKRIFRSKQIRSAIDSKVSRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETTGN 1038
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE) HSP 1 Score: 260 bits (664), Expect = 2.300e-74 Identity = 123/140 (87.86%), Postives = 134/140 (95.71%), Query Frame = 1
Query: 1 QSLTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESVSS 420
+++ + +KVFWKRCRELADH KIMEKIEKGEKRIFRSKQIR+AID+KV+RH+NPW DLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELE+ +
Sbjct: 933 ENVRKYIKVFWKRCRELADHPKIMEKIEKGEKRIFRSKQIRSAIDSKVSRHSNPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETTGN 1072
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A835ZE29_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE29_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.080e-54 Identity = 93/138 (67.39%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 1 QSLTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESV 414
+ + R VF KRC EL+DH K+MEKIE+GE+RI RSK+I+ A++ KV RH +PWQ L I+Y KGK +TEEEDAFL+NMMHRYGYGNWEVIR +I+KAWQF FDWFFKSRNAAELQ+RGD LI++VEKENEE+++
Sbjct: 808 EDIVRYFNVFLKRCHELSDHAKVMEKIERGERRIQRSKEIKVALEKKVQRHQSPWQHLPISYGSTKGKTYTEEEDAFLINMMHRYGYGNWEVIRTQIKKAWQFHFDWFFKSRNAAELQKRGDYLIKVVEKENEEIDAA 945
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A7S1XXH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXH0_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.580e-52 Identity = 81/136 (59.56%), Postives = 110/136 (80.88%), Query Frame = 1
Query: 7 LTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESV 414
+ R + FW+R EL +H K++E+IEKGE+RI R K IR A++ KV RH +PW+ +T++Y GGKGK++T EED FL+NMMHR+GYG WE IR+E+R+AWQFRFDW+FKSR+A E+QRR + L+R +EKENEE+ES
Sbjct: 124 IARYYRTFWERYEELPEHPKLLERIEKGERRIARMKSIRAALEAKVGRHPDPWRLMTLDYNGGKGKMYTLEEDVFLINMMHRHGYGEWERIRLEVRRAWQFRFDWYFKSRSAPEIQRRCEQLVRFIEKENEEIESA 259
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A7S4E930_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E930_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.680e-50 Identity = 87/139 (62.59%), Postives = 108/139 (77.70%), Query Frame = 1
Query: 1 QSLTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESVS 417
+ + R KVFW+R +ELAD ++++KIEKGEKR+ RSK+IR A+ K+ R P + L +NY +GKV+TEEEDAFLLNMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA+EL RR D LI+LVEKEN +L+ S
Sbjct: 65 EEVRRYHKVFWERHKELADWERVIDKIEKGEKRLQRSKEIREALAEKIARSPKPHECLPLNYGASRGKVWTEEEDAFLLNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNASELGRRADLLIKLVEKENSDLDGRS 203
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A6U0WH08_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WH08_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.130e-49 Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 1 QSLTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESVSSNGGKKXXS 444
+ + R FW R EL +H KI+E+IEKGE+RI R K+I+ A+D KV RH +PW+ ++INY G KGK++T EED FL+NMMHR+GYG WE IR+EIR+AWQFRFDW+FKSRN E+QRR DTLIR++EKENEE E S G K S
Sbjct: 937 EDIARYYTTFWTRYEELPEHPKILERIEKGERRIARLKEIKHALDVKVARHPDPWRLMSINYNGNKGKMYTLEEDVFLINMMHRHGYGEWERIRLEIRRAWQFRFDWYFKSRNVNEIQRRCDTLIRVIEKENEEFEGSDSRGRGKRQS 1084
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: F0YAG6_AURAN (Uncharacterized protein RUV1 n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG6_AURAN) HSP 1 Score: 181 bits (458), Expect = 1.760e-46 Identity = 83/125 (66.40%), Postives = 104/125 (83.20%), Query Frame = 1
Query: 28 FWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEE 402
FWK+ +++AD ++++K+EKGEKR+ RS++IR+A+ +KV RH PW+ L INY +GKV+TEEEDAFL+NMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA EL RR D LIRLVEKENE+
Sbjct: 828 FWKKHKDIADWERLVDKVEKGEKRLQRSQEIRSALADKVARHPKPWECLPINYGASRGKVWTEEEDAFLVNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNAQELNRRADLLIRLVEKENED 952
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A8J2SZN3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZN3_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.630e-45 Identity = 87/139 (62.59%), Postives = 108/139 (77.70%), Query Frame = 1
Query: 1 QSLTRSLKVFWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESVS 417
+ + R KVFW+R +ELAD ++++KIEKGEKR+ RSK+IR A+ K+ R P + L +NY +GKV+TEEEDAFLLNMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA+EL RR D LI+LVEKEN +L+ S
Sbjct: 914 EEVRRYHKVFWERHKELADWERVIDKIEKGEKRLQRSKEIREALAEKIARSPKPHECLPLNYGASRGKVWTEEEDAFLLNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNASELGRRADLLIKLVEKENSDLDGRS 1052
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A7S2BNI9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNI9_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.510e-44 Identity = 81/131 (61.83%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 25 VFWKRCR-ELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYY----GGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEE 402
VFWK+ +L+D KI+EKIEKGEK+I R+++IR A++ KVNR+A P+Q LT+++ G +GK+++EEEDA+L+ MMHR+GYG WE IR EIR+AWQF+FDWFFKSR+AA+LQRRGD L+R +EKENEE
Sbjct: 497 VFWKKASSQLSDWSKIIEKIEKGEKKIARNREIREALETKVNRYAQPFQQLTVSFAASSGGARGKIWSEEEDAYLVCMMHRHGYGQWERIRQEIRRAWQFKFDWFFKSRSAADLQRRGDVLLRCIEKENEE 627
BLAST of mRNA_S-dermatodea_contig10408.297.1 vs. uniprot
Match: A0A2R5GCY8_9STRA (ISWI chromatin-remodeling complex ATPase CHR11 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCY8_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.520e-42 Identity = 80/136 (58.82%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 28 FWKRCRELADHGKIMEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELESVSSNGGKK 435
FW+R +E++DH +I+++I+KGE+++ R I A+D KV R NPWQ LTINY KGK F+EEED FL+ M+ R GYG W+ ++ EIRKAW FRFDWFFKSR AAELQRR DTL+RL+EKE EE E+ S GK+
Sbjct: 996 FWRRYKEISDHERIIDRIKKGEQKLARRAAITEALDKKVARTKNPWQALTINYGSNKGKTFSEEEDRFLVCMLQRLGYGAWDQLKQEIRKAWNFRFDWFFKSRTAAELQRRADTLVRLIEKELEE-ETKKSEAGKR 1130
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 228.8 |
| Seed ortholog evalue | 1.7e-57 |
| Seed eggNOG ortholog | 2880.D8LDI0 |
| Preferred name | SMARCA5 |
| KEGG ko | ko:K11654,ko:K11727 |
| GOs | GO:0000003,GO:0000122,GO:0000166,GO:0000182,GO:0000183,GO:0000228,GO:0000733,GO:0000785,GO:0000790,GO:0000793,GO:0000819,GO:0000981,GO:0001067,GO:0001178,GO:0001410,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005677,GO:0005694,GO:0005700,GO:0005730,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006363,GO:0006366,GO:0006369,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007062,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007338,GO:0007399,GO:0007417,GO:0007420,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008623,GO:0009058,GO:0009059,GO:0009373,GO:0009553,GO:0009561,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0014070,GO:0015616,GO:0016043,GO:0016070,GO:0016458,GO:0016462,GO:0016584,GO:0016587,GO:0016589,GO:0016590,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017053,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019236,GO:0019237,GO:0019438,GO:0019953,GO:0019954,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030182,GO:0030435,GO:0030436,GO:0030447,GO:0030518,GO:0030522,GO:0030554,GO:0030575,GO:0030874,GO:0031010,GO:0031055,GO:0031213,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032870,GO:0032991,GO:0033043,GO:0033044,GO:0033993,GO:0034080,GO:0034097,GO:0034401,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035039,GO:0035041,GO:0035063,GO:0035075,GO:0035076,GO:0035092,GO:0035639,GO:0035690,GO:0036094,GO:0036310,GO:0036314,GO:0036315,GO:0036436,GO:0036437,GO:0040007,GO:0040026,GO:0040028,GO:0040029,GO:0040034,GO:0042127,GO:0042221,GO:0042493,GO:0042623,GO:0042752,GO:0042766,GO:0043044,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043401,GO:0043486,GO:0043565,GO:0043933,GO:0043934,GO:0043936,GO:0043954,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0045996,GO:0046019,GO:0046020,GO:0046483,GO:0046688,GO:0048229,GO:0048232,GO:0048468,GO:0048506,GO:0048509,GO:0048510,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060194,GO:0060195,GO:0060255,GO:0060260,GO:0060303,GO:0060322,GO:0061062,GO:0061063,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0070615,GO:0070827,GO:0070828,GO:0070829,GO:0070868,GO:0070870,GO:0070887,GO:0070925,GO:0071103,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071345,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071444,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090537,GO:0090568,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0097549,GO:0097617,GO:0097659,GO:0098813,GO:0140097,GO:0140110,GO:1900034,GO:1900036,GO:1900049,GO:1900050,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904949,GO:1905268,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000142,GO:2000177,GO:2001141,GO:2001251 |
| EggNOG free text desc. | helicase activity |
| EggNOG OGs | COG0553@1,KOG0385@2759 |
| COG Functional cat. | KL |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko03021,ko03036 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | SNF2-related, helicase, ISW1, SANT and SLIDE domain protein |
| Ec32 ortholog | Ec-15_000520.1 |
| Exons | 4 |
| Model size | 1177 |
| Cds size | 459 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10408.297.1 >prot_S-dermatodea_contig10408.297.1 ID=prot_S-dermatodea_contig10408.297.1|Name=mRNA_S-dermatodea_contig10408.297.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=153bp
MEKIEKGEKRIFRSKQIRTAIDNKVNRHANPWQDLTINYYGGKGKVFTEE
EDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDT
LIRLVEKENEELESVSSNGGKKRKSLPASDTPASSKKKKAATPATAKKQR
RR* back to topmRNA from alignment at S-dermatodea_contig10408:113..5971- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10408.297.1 ID=mRNA_S-dermatodea_contig10408.297.1|Name=mRNA_S-dermatodea_contig10408.297.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5859bp|location=Sequence derived from alignment at S-dermatodea_contig10408:113..5971- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAATCACTTACTCGCTCATTGAAGGTCTTCTGGAAGCGTTGCCGCGAGCT
GGCCGACCACGGGAAGATCATGGAGAAGATCGAGAAGGGAGAGAAGCGCA
TCTTCCGGTCGAAGCAGATCAGGACTGCGATCGACAACAAGGTCAACCGA
CACGCCAACCCCTGGCAAGACCTGACCATCAACTACTACGGTGGCAAGGT
CAGTCAGTCGGTCTAACGAAAACAAAAGGCGATGGCCGGCTTCTGTCTTG
CCCACATCTGTCGCGCTATTAATAATATAGGTGTATGATATTTATGACGT
TATGATGTTTATGATGTTTGTTTTTTATTAAAGGATATTTGATATTTTGA
CGTTATGATATTCATGATGTTTGCTTTTTATTAATAGGATATTTTTACGT
TTATGATGGTACAGTATTGTGATGTTGTGACGTCGTGATATTTTGACGCC
TGGTGTTTATGGCGGCATGTTTATGGCGGCAAGGTTGGTCGGTTTCAGCA
ACAAAAACAAAAACAAAACGAAAACGAAAGAAGAACGGTGGTTTGCTTCT
ATCTTGCCCACATCTGTCGCGCTAATGTATTATAGGTGTATTATATTTAT
GACGTTATGATATTTATGATGTTTGTTTTTAATGATATTTTTACGTTTAT
GATGGTACTATTATATTATACTGTGATGTTATGACGTTGTGATGTTATGA
TTTTATGATGTTGTGACATTATGATGTTGGCATTGTACACAATATTCCTG
CCAAGACTGTACATACAACATGTATATATTGTCTTGTTCAAGTAAAGAGT
ACAAACTCGAAAGAAGATGCTCGCTCCTCTAGTTTGTTAATTTCCTATAC
TCCACCCTCTTAATGGTAGTATTGCTGTACTTATGGTTTGTTCTTGACGG
GAACGAAAATACAACAAAACACGTCAAGAAACGTAAAAAATCACTTCTTT
TTCGTCCGGCCTTTCGGGTCAGGACATGCAAAACGTGAATAAAACAAAAA
TCGAGAGGAAAAACGCGGGGTGCTGTAGACAGCAGTAATATACAATGCCC
CAAAGTCCCTTTGCAGTACTTGGAGTGTAGTCACGCCTGCTGAGTGCAAC
ATTTGGTTGTCCGGTGTGTCTGTCTAATCAACCCATGGCTTGTCGTTTGG
CGTCGCAAACGCAAAGGGTGATGACCAGCAGCTGGTATGTATAATCCTTG
TGAAACGCAGCCTGGCCTGGCCGGCGAAAACCTACCTGGCATATCGCTCC
GTCATATGTCCGTTTGGATATGACATGCGTTTAACATAAGTACACCCCAC
CCCTGAAAACACTACTGGAAAATATGTATAAACACAAGACAGAGCGAACA
TTGGGGTCCAATTTTTTTGGTAGACTGTTCCTCCCATTACCATTACCACA
CCGCTGCCACAATCCGCCTGGGCGCCTCTCTCCCCGACCTCTCAACCCGA
CCCGACCCGAGATTGGGGGCAGCCATGTCGCCGAGGAACGAGCCACCTAA
CTGAGAGGGCAATAAAGGCGCTGTGAGCAGCCGAGAGAGGAAAGGTCGCC
AAAAATATGCCTCATGACGAGAGCTCGCCAAGAGAGCTCGCAGACACACC
CACCCACCAGCGGCCCTTGATGCGAAATCGATCGGGTTTGCTGGCGACTG
GCATCGAGAGATGACTTAGCCGTTTCGGAGAGCCCTATTAAACCTTTTGG
GACTAAGGCTGTTTTCGGGTAACTGTTTGCTATTGTAATGAACCCTTTTG
GGGCTGTAATAAGCCTGGGGACGAAGCCTGTTTTCGGGTAACTGTTGGCT
ACCATAATAGCAAACAGTTACCCGATAACAGCCGTAGTCCCAAAACAAAA
GGGTATATAATAATAGCAAACAGTTACCCGAAAACAGCCTTAGTCCCAAA
AGGTTATTCCTATTACGGAGGTACAGAGTAATCAGGACCAAATCTCATGA
CCATGAATACCCAAACAAATAAAAATCTCATGAAAAAAAAAGTACATAGG
CACGAGATGTGCCCGGCCATACACAGGAACATCCACCTTGAAATCTCGAT
AATTCCAGCCTATTTGGATTTTTCTACGTTGAGATTTGTGGCGAATTTGG
ACCTGCTGTTAACTGTGGTATAGTCCCCCGTAATAGTATTTTCAAGCTTT
TTATGATGTTTCGCCTGTTTGTACACCTCACGGGCGTGGAGCCGTGGCTA
CCCCCACTAGTTGTACTTGTACCGAAATTATTTACCGAATGTACATACCG
AACCGTGACAGGGTAAGGTTTTCGCGGAGGAGGAGGACGCGTTCCTCCTC
AACACCGAATATATTTACCGAACCGCGACAGGGTAAGGTGTTCACGGAGG
AGGAGGTATTCCTCCTCAACACCGAATATATTAATCGAACACATTTACCG
AATGTTTCCCGAATGTATTTACCGAACCGCGACAGGGTAAGGTGTTCACG
GAAGAGGAGGAGGCATTCCTCCTCAACACCGAACATCTTAATCGAATACA
TTTACCGAATATATTTCCCGAATGTATTTACCGAACCGCGACAGGGTAAG
GTGTTCACGGAGGAGGAGGACGCGTTCCTCCTGAACATGATGCATCGCTA
CGGGTACGGTAACTGGGAGGTCATCAGAATGGAGATCCGGAAGGTGAGCT
TTGAGCTTTTGCCGCAAATGTGCAACACGCGGAAGTTTGTTTCGTTCGTT
GCAGGTGATCGGCAAAGCTTTCTTTTCTCTGCCCGTGTCAAGCAGATCGA
TTTGCTCCTCATGTGTCTGTATGGTCAAGATTCAAATGTTTTGTCTGCTG
CGCAACAAGCTGCTACTGCTATTAATATTATAGTGTATCCGTGCCCCACA
AGTGTAACATGGTACATGTTTTTTCGTCGATCCGTGTACGCCTCAGTGTA
TGTATGCGGGGAACCTTAGAAAGACGAAATCAAAACCAGTGCATGTTTTG
CGCTTCATTCGGCCCTTTCGCGCGCGCCTCTGGCCGGTTACTTATCCCCC
CTTTTTTGCGCGCGAGTGACGGGTGGGTGGACGCACAAGTGCATGACCGT
GCAAAGGGAGCTTTTACACAGAGTAGAGTGCTATAAATGTATATGTTTAT
ATTGCACTAGTAATAATTATAGTAATGGTAGTCTTGCAGTAGCCTATGGC
ATAGTCAAACAATTGTCTATAGCCGACCCCTTTTGAAGCCACTATAAGTG
TAATTTTTGTGAACTCTAAATCGCTATTTAAACACGTTGAAAGCGCTATA
ATAGGTATTTTACTGTAACTACCCATTTTTCGTGACCTTTGATTCCTGGC
TGAGTACGTTGGGCATTTATATAATGATATACTGTTTGCCACATTTGCTC
CGGACTATGATACTGATTATTATAGTTACACTTTTCTCATTGACTCTTTG
CTACACTACAGTATATTATATATTATATATTGCATCTGACCACATGTCAG
ATAGGTCGGATTAAGCCGATCGGCTATACGTGTGCAAATCAATCAATAAC
TCAATCAATCAATCAATCAAATCAAGTAATCCTCTTGGATGTGGAACAAG
ACCCAGTCTCGAGGGTGTGGATGATATGTATTATCTATGCTCCTCGTGAC
CACAGACGGGCCTGCTTCGGATGAGGCCGGCCAGTCTTACCTGAGCCACA
TTCCTGGTATCACACAAACACACGCGTACATGGTGACACGTGCAGAAAAT
AACCGAATCGCATCGCATCACACCGCATCAGATTGCAAAGACCGCTGACC
CCCCCCCCCCTGAAACAATGAAATATTGATAAAACACCGAGCGAACGTTG
GGGTCCAATCCTTTGGTAGAGGAAAATATACCCCCAGCTAACTAACTAAC
TCAGTGGAGGTAGGCCTACGTTCTGTATGTATGATGCTCTAGGGCCCTAC
TGGACTATAGCTGTACTGTATACTACTTTGAAGATGGCTGCCGATTGAGA
ACTGTACGGTAACGTCTTCCGATGGTCAGACGCTCCCCCCCCCCTAAAAA
AAGAAAGATTTCAGAAACATAGGGCGAGCGTTGCGGTCCCACGATTTCAA
CAGGGCAGATGGTCCCAGCGACGCCTATGGAGGCTCAGTTGTTNNNNNNN
NNNGTTTGCTCAAGTGCGCTTACTTTTTTTCTTTCTGATAAACAAAGTAA
TATTTTTTTCGATTAATTAACACATTCGGCGTTTCTATTCTTTCTCTATT
TTTCTCTGCTCCCCCCCCCCCCCCCCCCTCCCGCACAAAAAATCCGCGAT
GTCGACATTTTGTTTCGCGCGCATTTTTCGGCCTCCTCTCTCCTCTCTCC
CCTCTCCTCTCCCCTCTCTCGATACAAAACAGGCGTGGCAGTTCCGCTTC
GACTGGTTCTTCAAGAGCAGGAACGCGGCGGAGCTTCAGCGGCGCGGCGA
CACGCTCATCCGCCTCGTGGAAAAGGAGAACGAGGAGCTAGAGGTGAATG
AAAGAGACCACTGTTTGTTTTTGCACTTATAGTAAGGTAACAAGGGACGG
CATTGTGTATACTAAGTGTTGTGATAAGCTTTTTTTTTATTTTTTCCTTG
AGTCTTTGTGCTTGCTGTATGAAAAGCATCTGACCACAAGTCGGGTCGGA
TTATAAGCCGATCGGCTATTGTACATAGGTGTGATAAATCAGTAATAAAT
ATAAAACAAACACGCCTTTTTACGAACGCTGTTTAGCTTTAAATTTGTCC
TGATTCCTGTGTACCTTCGTTTTATTTAATTTTGTGGCTTGTATATCACA
ACGCTGCTTTTTTGCTTTGTTATTACCATCGAATCATCTTTTCTTGCCGT
TTCTTGTTTGTTTGTTTGTTTGTTTTTCTCACCGTCGCTAAATAAAAAAA
TTAGTGTATATTACAACTACAAGTTGTTCGGGCCACCAACCAAGCCAACG
ATTAATTTTACAGACAAAATTCTCTTCTTTTTTTGTCCTTGTTACCGCTG
TCTGTGTACGTCCGTTTTATTTCATTTGGTGGCGTGTATCGTAACACTAC
TCGTTTTGCACCTCCGTTCGCATTGCCATCGAATTCTCTTTTTTTCTTTT
TCTTTTTCTCTCTCTCTCCTCTCTCTCTCGTTGCCTCCAGTCGGTTAGCA
GCAATGGAGGGAAAAAGCGCAAGAGCCTGCCAGCGTCGGACACCCCGGCT
TCCTCCAAGAAAAAGAAGGCGGCGACTCCAGCGACGGCCAAGAAGCAGCG
CCGTCGATAACTTTTCTTTCTCTCCTTTTTTTCTGTCTACCTCTTTTTTC
TTTTCTTTTTGTAGTCCGGCTTTTTTCTTACAAAAATGGTTTATTGGTGA
TTTTGCTTGTTTAATCCTTTTTGGTACAAGGACTAGCCCCCCCCCTCCCT
CCCTGTCTGGAGCGTCGGCTTAGGTAGCAACGTAACGAGGCGTGCTTGAA
ACGGAGCTCTGAGGGATCGCACCCTCCATGGGTTGTGACGCAGGAATGAG
AGAAAAACGGCGCCATAAGGGAAGCGCGGCTGCAGCTGTCGACTGCCATC
GAGATGGTTTTTGAATACGTAGCTATAGTAGGGAAGGGAGTCGGCTCCGA
CTATACGTGTAGTCCGACTGACTAACTTATTGTATAGTCAGTCAGTCGGC
TGCGGGGCATGACGACTAGAAATAGTTGACCTTTGGGTTTCGTATGTCCT
GGCATGGCATTTTCACGCGGTGGCAAATAGCCCGCGGCGCCGGCTCGCTG
CGCTCGCCCGACTATGGCCAACTAATTAGTTAGGCCGGTTAGTTGGCGAA
GAGTCGGATAGTCGACTGGCGTCGGCGGCCGACTAGTTCAGCTGGCTCAC
AACCCTAATTCAATACAATACCTTCCTGTAGTGTGTGGAGAAGGGGGGTG
TTGGTGCGT back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10408:113..5971- >mRNA_S-dermatodea_contig10408.297.1 ID=mRNA_S-dermatodea_contig10408.297.1|Name=mRNA_S-dermatodea_contig10408.297.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at S-dermatodea_contig10408:113..5971- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGAGAAGATCGAGAAGGGAGAGAAGCGCATCTTCCGGTCGAAGCAGAT
CAGGACTGCGATCGACAACAAGGTCAACCGACACGCCAACCCCTGGCAAG
ACCTGACCATCAACTACTACGGTGGCAAGATGGAGAAGATCGAGAAGGGA
GAGAAGCGCATCTTCCGGTCGAAGCAGATCAGGACTGCGATCGACAACAA
GGTCAACCGACACGCCAACCCCTGGCAAGACCTGACCATCAACTACTACG
GTGGCAAGGGTAAGGTGTTCACGGAGGAGGAGGACGCGTTCCTCCTGAAC
ATGATGCATCGCTACGGGTACGGTAACTGGGAGGTCATCAGAATGGAGAT
CCGGAAGGGTAAGGTGTTCACGGAGGAGGAGGACGCGTTCCTCCTGAACA
TGATGCATCGCTACGGGTACGGTAACTGGGAGGTCATCAGAATGGAGATC
CGGAAGGCGTGGCAGTTCCGCTTCGACTGGTTCTTCAAGAGCAGGAACGC
GGCGGAGCTTCAGCGGCGCGGCGACACGCTCATCCGCCTCGTGGAAAAGG
AGAACGAGGAGCTAGAGGCGTGGCAGTTCCGCTTCGACTGGTTCTTCAAG
AGCAGGAACGCGGCGGAGCTTCAGCGGCGCGGCGACACGCTCATCCGCCT
CGTGGAAAAGGAGAACGAGGAGCTAGAGTCGGTTAGCAGCAATGGAGGGA
AAAAGCGCAAGAGCCTGCCAGCGTCGGACACCCCGGCTTCCTCCAAGAAA
AAGAAGGCGGCGACTCCAGCGACGGCCAAGAAGCAGCGCCGTCGATAATC
GGTTAGCAGCAATGGAGGGAAAAAGCGCAAGAGCCTGCCAGCGTCGGACA
CCCCGGCTTCCTCCAAGAAAAAGAAGGCGGCGACTCCAGCGACGGCCAAG
AAGCAGCGCCGTCGATAA back to top
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