mRNA_S-dermatodea_contig104.290.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: D8LBD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD9_ECTSI) HSP 1 Score: 280 bits (715), Expect = 2.300e-87 Identity = 166/239 (69.46%), Postives = 185/239 (77.41%), Query Frame = 3
Query: 18 MGLRSLLVAATLLSLWSCHEVRSFAVVPALARRVCSARPTSLLC---GSHARFGGGGKQRPRPG-RRETAT-MMARGSTFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVT-DED----AARGEGDGDEEDVEGFEGLTEDDFFTFD 704
M +RSL++AA L++ + C EV SF V L R CS + C H R G G +P PG RR TAT MMARGSTFRS ESKRQARVSQL+T ELAK+LRLG GIKTKDKI DDVRC+IAVVDVDMSPDLRSAKV+ISVYGDVLEKREAYAWCVKNT IRMAL ELKGMKRVPELFF+DTDI AAVDLMALID+V+ DED A R +G EE++EGFEG+TEDDFFTFD
Sbjct: 1 MAVRSLVIAAALITAYGCREVLSFVGVSVLPR-ACSQQQQPQQCLGASGHGRCGWVGAVQPPPGKRRPTATVMMARGSTFRSTTESKRQARVSQLLTGELAKILRLGHGIKTKDKIDDDVRCRIAVVDVDMSPDLRSAKVFISVYGDVLEKREAYAWCVKNTKAIRMALCAELKGMKRVPELFFKDTDISAAVDLMALIDRVSGDEDGNEAALRDDG---EEEIEGFEGVTEDDFFTFD 235
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A835ZHE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE8_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.540e-40 Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 3
Query: 210 TATMMARGSTFRS-RDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 608
T M R + F++ R ESKRQAR+SQL+T ELA ++RLG +K ++D++R KI++VDV++SPDLR+A++++SVYGD LEKREAY WCV+NT IR AL+ LK MK VPEL F+ TDIGAAVD+M LI KV
Sbjct: 52 TQLRMGRANRFKAARPESKRQARISQLLTAELASIIRLGHHVKGSKALSDELRSKISIVDVNVSPDLRNARIFVSVYGDRLEKREAYGWCVRNTGGIRFALSQRLKDMKGVPELTFQQTDIGAAVDVMHLIGKV 185
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2DN30_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN30_9STRA) HSP 1 Score: 130 bits (328), Expect = 7.690e-31 Identity = 63/129 (48.84%), Postives = 93/129 (72.09%), Query Frame = 3
Query: 222 MARGSTFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 608
M+RG+ ESKRQ RVSQ++ +E+ +LR G K I D +R KI++VDV MSPDLR+AKVY+SV+GD++++R+AY+W V N+ I+ +LA L MK VP+L+F++TD+ AAVD+M I+ +
Sbjct: 45 MSRGNAVSKGRESKRQGRVSQVIRSEIVTILRRGSMKYMKKDIGDTLRQKISIVDVHMSPDLRTAKVYVSVFGDIVDRRQAYSWLVMNSKAIKHSLAQSLSAMKTVPDLYFKETDLAAAVDVMTTIESI 173
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S1U3D0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3D0_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.190e-30 Identity = 64/137 (46.72%), Postives = 95/137 (69.34%), Query Frame = 3
Query: 198 GRRETATMMARG-STFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDK 605
G R TM ARG S R RDES+RQ+R++QLV E++ +L G G+++ I ++R I++VDVD+SPDLR+ +Y+SV GD KREA+AW V++T +R LA +G+KR+PE+ F+ D+ AAVD+ LI++
Sbjct: 21 GARAPMTMGARGGSLVRRRDESRRQSRIAQLVKAEVSAILLTGHGVRSPRDIDGELRKAISIVDVDVSPDLRNCNIYVSVRGDGAGKREAFAWLVRSTRALRHVLAQRNRGLKRIPEILFKQADVSAAVDVFRLIEE 157
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2SUM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM5_9STRA) HSP 1 Score: 121 bits (303), Expect = 8.400e-28 Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 3
Query: 219 MMARGSTFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTDEDAARGEGDGDEEDVEGFEGL--TEDDF 692
+ ARG RDESKRQARV+QLV EL++V+R G TK I + R KI++VDV MSPDLR+AKV++SV+ E R+AYAW V+++ R L+ EL+ M+ VP L FR D+ AVD+M ID + D G D EGFE EDDF
Sbjct: 54 VQARGPGVGRRDESKRQARVAQLVRAELSQVIRQGTRANTKG-ITEATRQKISIVDVHMSPDLRNAKVFVSVFASGPESRQAYAWLVQSSGAFRHELSQELRHMRSVPALTFRRADVAEAVDVMVAIDNLND-------GRARTRDEEGFEDWLGVEDDF 205
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7R9W0U4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0U4_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.730e-27 Identity = 63/131 (48.09%), Postives = 90/131 (68.70%), Query Frame = 3
Query: 234 STFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYG----DVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTD 614
S + + D SKRQ RV +V +ELA++++ GF IK D I D++R +I VV+ D+SPDLR A+V +S+ G ++KR AY+W V++T IR A+A LK MK P+L F D+GAAVD+M LI+KV+D
Sbjct: 47 SRYAASDRSKRQERVGHVVRSELARIIQAGFPIKNVDPIDDELRRRINVVNADVSPDLRHARVTVSIIGRGETSTVDKRRAYSWLVRSTKMIRHAMAQRLKHMKVCPDLKFVQADVGAAVDVMRLIEKVSD 177
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S3F0D2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F0D2_9EUKA) HSP 1 Score: 105 bits (262), Expect = 1.300e-22 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 3
Query: 273 RVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTDE----DAARGEG 638
RV Q+V +ELA VL G + KI+ + I++VD+DMSPDLR+A+V +S+ GD +K A W + PIR LA LKGMKR+P+L F+ D+GAAVD+M I ++++E +AARGEG
Sbjct: 3 RVGQVVRSELATVLHSG-AVHGNKKISGRLLSMISIVDIDMSPDLRNARVKVSIIGDRKDKISAVRWLQGSAKPIRHVLAQRLKGMKRIPQLSFQHVDVGAAVDMMVKIQELSEERQRAEAARGEG 127
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2UPV8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPV8_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.510e-22 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 3
Query: 234 STFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGD--------VLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 608
S + S+D SKRQ RV LV E++ +L L IK D + ++R +I+VV+VD+SPDL A++ +S+ G V+++R AY+W V++T IR ALA L MK VP L F D+GAAVD+M LI+KV
Sbjct: 55 SRYGSQDRSKRQERVGHLVRAEISSILTLSHEIKHSDYLEGELRKRISVVNVDVSPDLAQARITVSLVGGNHDTKEDAVVDQRRAYSWLVRSTKMIRHALAQRLSHMKGVPNLTFVLADVGAAVDVMQLIEKV 187
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2NYX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYX9_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.370e-22 Identity = 61/132 (46.21%), Postives = 83/132 (62.88%), Query Frame = 3
Query: 252 DESKRQARVSQLVTTELAKVLRLGFGIKTKDKIAD-DVRCKIAVVDVDMSPDLRSAKVYISVYGD------------VLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 608
D+SKRQ RV QLV +E+A +++LG IK D D D+R +I+VV+ D+SPDLR A++ +SV V+EKR AY+W VK+T IR ALA L MK +P L F D+GAAVD+M I+ +
Sbjct: 65 DKSKRQFRVGQLVRSEIASIIKLGHEIKHTDGSLDSDLRLRISVVNADVSPDLRQARITVSVISKPNTDETAKLSDTVVEKRVAYSWLVKHTKNIRHALAQRLSHMKTIPNLTFAQADVGAAVDVMNKINNI 196
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A1Z5KIK3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIK3_FISSO) HSP 1 Score: 102 bits (255), Expect = 9.240e-22 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 3
Query: 258 SKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDV------LEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVT 611
SKRQ RV QLV TEL K+L G + + AD +R +I+VV D+SPDLR A++ ISV + ++KR AYAW V N P+R AL+ +L MK PEL F D+ AAVD+M LIDK++
Sbjct: 11 SKRQERVGQLVRTELGKILHQGSASRAEFLDAD-LRQRISVVKADVSPDLRQARISISVSASLAREDTAMDKRRAYAWLVNNAKPLRHALSQKLSHMKSCPELKFVQVDVAAAVDVMYLIDKIS 133 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig104.290.1 >prot_S-dermatodea_contig104.290.1 ID=prot_S-dermatodea_contig104.290.1|Name=mRNA_S-dermatodea_contig104.290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=258bp MGLRSLLVAATLLSLWSCHEVRSFAVVPALARRVCSARPTSLLCGSHARFback to top mRNA from alignment at S-dermatodea_contig104:11119..12759+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig104.290.1 ID=mRNA_S-dermatodea_contig104.290.1|Name=mRNA_S-dermatodea_contig104.290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1641bp|location=Sequence derived from alignment at S-dermatodea_contig104:11119..12759+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig104:11119..12759+ >mRNA_S-dermatodea_contig104.290.1 ID=mRNA_S-dermatodea_contig104.290.1|Name=mRNA_S-dermatodea_contig104.290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at S-dermatodea_contig104:11119..12759+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |