prot_S-dermatodea_contig104.290.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig104.290.1
Unique Nameprot_S-dermatodea_contig104.290.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length258
Homology
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: D8LBD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD9_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 1.400e-91
Identity = 185/272 (68.01%), Postives = 204/272 (75.00%), Query Frame = 0
Query:    1 MGLRSLLVAATLLSLWSCHEVRSFAVVPALARRVCSARPTSLLC---GSHARFGGGGKQRPRPG-RRETAT-MMARGSTFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVT-DED----AARGEGDGDEEDVEGFEGLTEDDFFTFDXXXXXXXXXXXEDVGFDL------DEVERDGEL 256
            M +RSL++AA L++ + C EV SF  V  L R  CS +     C     H R G  G  +P PG RR TAT MMARGSTFRS  ESKRQARVSQL+T ELAK+LRLG GIKTKDKI DDVRC+IAVVDVDMSPDLRSAKV+ISVYGDVLEKREAYAWCVKNT  IRMAL  ELKGMKRVPELFF+DTDI AAVDLMALID+V+ DED    A R +G   EE++EGFEG+TEDDFFTFDXXXXXXXXXXX             DE ERDGEL
Sbjct:    1 MAVRSLVIAAALITAYGCREVLSFVGVSVLPR-ACSQQQQPQQCLGASGHGRCGWVGAVQPPPGKRRPTATVMMARGSTFRSTTESKRQARVSQLLTGELAKILRLGHGIKTKDKIDDDVRCRIAVVDVDMSPDLRSAKVFISVYGDVLEKREAYAWCVKNTKAIRMALCAELKGMKRVPELFFKDTDISAAVDLMALIDRVSGDEDGNEAALRDDG---EEEIEGFEGVTEDDFFTFDXXXXXXXXXXXXXXXXXXXXXXXXDEEERDGEL 268          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A835ZHE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE8_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.100e-43
Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 0
Query:   65 TATMMARGSTFRS-RDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 197
            T   M R + F++ R ESKRQAR+SQL+T ELA ++RLG  +K    ++D++R KI++VDV++SPDLR+A++++SVYGD LEKREAY WCV+NT  IR AL+  LK MK VPEL F+ TDIGAAVD+M LI KV
Sbjct:   52 TQLRMGRANRFKAARPESKRQARISQLLTAELASIIRLGHHVKGSKALSDELRSKISIVDVNVSPDLRNARIFVSVYGDRLEKREAYGWCVRNTGGIRFALSQRLKDMKGVPELTFQQTDIGAAVDVMHLIGKV 185          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2DN30_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN30_9STRA)

HSP 1 Score: 130 bits (328), Expect = 3.260e-33
Identity = 63/129 (48.84%), Postives = 93/129 (72.09%), Query Frame = 0
Query:   69 MARGSTFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 197
            M+RG+      ESKRQ RVSQ++ +E+  +LR G     K  I D +R KI++VDV MSPDLR+AKVY+SV+GD++++R+AY+W V N+  I+ +LA  L  MK VP+L+F++TD+ AAVD+M  I+ +
Sbjct:   45 MSRGNAVSKGRESKRQGRVSQVIRSEIVTILRRGSMKYMKKDIGDTLRQKISIVDVHMSPDLRTAKVYVSVFGDIVDRRQAYSWLVMNSKAIKHSLAQSLSAMKTVPDLYFKETDLAAAVDVMTTIESI 173          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S1U3D0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3D0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.470e-32
Identity = 64/137 (46.72%), Postives = 95/137 (69.34%), Query Frame = 0
Query:   61 GRRETATMMARG-STFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDK 196
            G R   TM ARG S  R RDES+RQ+R++QLV  E++ +L  G G+++   I  ++R  I++VDVD+SPDLR+  +Y+SV GD   KREA+AW V++T  +R  LA   +G+KR+PE+ F+  D+ AAVD+  LI++
Sbjct:   21 GARAPMTMGARGGSLVRRRDESRRQSRIAQLVKAEVSAILLTGHGVRSPRDIDGELRKAISIVDVDVSPDLRNCNIYVSVRGDGAGKREAFAWLVRSTRALRHVLAQRNRGLKRIPEILFKQADVSAAVDVFRLIEE 157          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2SUM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM5_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.030e-30
Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 0
Query:   68 MMARGSTFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTDEDAARGEGDGDEEDVEGFEGL--TEDDF 225
            + ARG     RDESKRQARV+QLV  EL++V+R G    TK  I +  R KI++VDV MSPDLR+AKV++SV+    E R+AYAW V+++   R  L+ EL+ M+ VP L FR  D+  AVD+M  ID + D       G     D EGFE     EDDF
Sbjct:   54 VQARGPGVGRRDESKRQARVAQLVRAELSQVIRQGTRANTKG-ITEATRQKISIVDVHMSPDLRNAKVFVSVFASGPESRQAYAWLVQSSGAFRHELSQELRHMRSVPALTFRRADVAEAVDVMVAIDNLND-------GRARTRDEEGFEDWLGVEDDF 205          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7R9W0U4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0U4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.140e-29
Identity = 63/131 (48.09%), Postives = 90/131 (68.70%), Query Frame = 0
Query:   73 STFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYG----DVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTD 199
            S + + D SKRQ RV  +V +ELA++++ GF IK  D I D++R +I VV+ D+SPDLR A+V +S+ G      ++KR AY+W V++T  IR A+A  LK MK  P+L F   D+GAAVD+M LI+KV+D
Sbjct:   47 SRYAASDRSKRQERVGHVVRSELARIIQAGFPIKNVDPIDDELRRRINVVNADVSPDLRHARVTVSIIGRGETSTVDKRRAYSWLVRSTKMIRHAMAQRLKHMKVCPDLKFVQADVGAAVDVMRLIEKVSD 177          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S3F0D2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F0D2_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 2.470e-24
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0
Query:   86 RVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTDE----DAARGEG 207
            RV Q+V +ELA VL  G  +    KI+  +   I++VD+DMSPDLR+A+V +S+ GD  +K  A  W   +  PIR  LA  LKGMKR+P+L F+  D+GAAVD+M  I ++++E    +AARGEG
Sbjct:    3 RVGQVVRSELATVLHSG-AVHGNKKISGRLLSMISIVDIDMSPDLRNARVKVSIIGDRKDKISAVRWLQGSAKPIRHVLAQRLKGMKRIPQLSFQHVDVGAAVDMMVKIQELSEERQRAEAARGEG 127          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2UPV8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPV8_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.440e-24
Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 0
Query:   73 STFRSRDESKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGD--------VLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 197
            S + S+D SKRQ RV  LV  E++ +L L   IK  D +  ++R +I+VV+VD+SPDL  A++ +S+ G         V+++R AY+W V++T  IR ALA  L  MK VP L F   D+GAAVD+M LI+KV
Sbjct:   55 SRYGSQDRSKRQERVGHLVRAEISSILTLSHEIKHSDYLEGELRKRISVVNVDVSPDLAQARITVSLVGGNHDTKEDAVVDQRRAYSWLVRSTKMIRHALAQRLSHMKGVPNLTFVLADVGAAVDVMQLIEKV 187          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A7S2NYX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYX9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 7.900e-24
Identity = 61/132 (46.21%), Postives = 83/132 (62.88%), Query Frame = 0
Query:   79 DESKRQARVSQLVTTELAKVLRLGFGIKTKDKIAD-DVRCKIAVVDVDMSPDLRSAKVYISVYGD------------VLEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKV 197
            D+SKRQ RV QLV +E+A +++LG  IK  D   D D+R +I+VV+ D+SPDLR A++ +SV               V+EKR AY+W VK+T  IR ALA  L  MK +P L F   D+GAAVD+M  I+ +
Sbjct:   65 DKSKRQFRVGQLVRSEIASIIKLGHEIKHTDGSLDSDLRLRISVVNADVSPDLRQARITVSVISKPNTDETAKLSDTVVEKRVAYSWLVKHTKNIRHALAQRLSHMKTIPNLTFAQADVGAAVDVMNKINNI 196          
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Match: A0A1Z5KIK3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIK3_FISSO)

HSP 1 Score: 102 bits (255), Expect = 2.110e-23
Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 0
Query:   81 SKRQARVSQLVTTELAKVLRLGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDV------LEKREAYAWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVT 198
            SKRQ RV QLV TEL K+L  G   + +   AD +R +I+VV  D+SPDLR A++ ISV   +      ++KR AYAW V N  P+R AL+ +L  MK  PEL F   D+ AAVD+M LIDK++
Sbjct:   11 SKRQERVGQLVRTELGKILHQGSASRAEFLDAD-LRQRISVVKADVSPDLRQARISISVSASLAREDTAMDKRRAYAWLVNNAKPLRHALSQKLSHMKSCPELKFVQVDVAAAVDVMYLIDKIS 133          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig104.290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD9_ECTSI1.400e-9168.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHE8_9STRA2.100e-4358.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DN30_9STRA3.260e-3348.84Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1U3D0_9STRA4.470e-3246.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SUM5_9STRA6.030e-3047.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9W0U4_9STRA8.140e-2948.09Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3F0D2_9EUKA2.470e-2446.83Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2UPV8_9STRA4.440e-2445.11Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2NYX9_9STRA7.900e-2446.21Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5KIK3_FISSO2.110e-2348.39Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 81..184
e-value: 3.4E-15
score: 57.8
IPR000238Ribosome-binding factor APFAMPF02033RBFAcoord: 83..190
e-value: 1.1E-14
score: 54.7
IPR000238Ribosome-binding factor APANTHERPTHR33515FAMILY NOT NAMEDcoord: 62..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePRODOMPD007327coord: 86..179
e-value: 6.0E-6
score: 120.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.704
IPR023799Ribosome-binding factor A domain superfamilySUPERFAMILY89919Ribosome-binding factor A, RbfAcoord: 80..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig104contigS-dermatodea_contig104:11136..11909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig104.290.1mRNA_S-dermatodea_contig104.290.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig104 11119..12759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig104.290.1 ID=prot_S-dermatodea_contig104.290.1|Name=mRNA_S-dermatodea_contig104.290.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=258bp
MGLRSLLVAATLLSLWSCHEVRSFAVVPALARRVCSARPTSLLCGSHARF
GGGGKQRPRPGRRETATMMARGSTFRSRDESKRQARVSQLVTTELAKVLR
LGFGIKTKDKIADDVRCKIAVVDVDMSPDLRSAKVYISVYGDVLEKREAY
AWCVKNTVPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDKVTDE
DAARGEGDGDEEDVEGFEGLTEDDFFTFDFDGDDDDDDDNEDVGFDLDEV
ERDGELE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015946KH_dom-like_a/b
IPR000238RbfA
IPR023799RbfA_dom_sf