mRNA_S-dermatodea_contig10390.283.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10390.283.1
Unique NamemRNA_S-dermatodea_contig10390.283.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: D8LKI7_ECTSI (White-brown-complex ABC transporter family (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI7_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 9.080e-84
Identity = 171/341 (50.15%), Postives = 207/341 (60.70%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSA-TPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATT------STVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DD+++LSEGRV+F+GPAK++ ++FR KG+ +P +TNP +FA+DVVSVDY S   E  +K RIA F ++   SA T              S   S  EK G  A                                      +TV +G  T+     + R               +                     AG +EQFRLLL+RSWRQVNRAKFAN TRVVANLGSAV+FGSIFWKLG+GQSHINDR+GLLQT+VIQ AMSTVAKTLVTFP E+TIVKAERSL MYSVLPYFL+KMIA+LP++ALFP + G ++Y MTGLHPKRDR
Sbjct:  228 QPRSSIFGMFDDVLLLSEGRVMFQGPAKRIGSYFRSKGYPMPSNTNPGDFAVDVVSVDYTSKKTERRTKERIARFDAEHRASAPTXXXXXXXXXXXXLLSYFVSHWEKTGGEATEDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVVKGGATSSKAAAQRRGXXXXXXXXXXAKXGSKXXXXXXXXXXXXXXXXXXXXAGAMEQFRLLLARSWRQVNRAKFANATRVVANLGSAVVFGSIFWKLGMGQSHINDRIGLLQTSVIQTAMSTVAKTLVTFPKEATIVKAERSLNMYSVLPYFLAKMIADLPLTALFPTVSGAVMYKMTGLHPKRDR 568          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A150GTS9_GONPE (ABC transporter domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GTS9_GONPE)

HSP 1 Score: 197 bits (501), Expect = 5.440e-54
Identity = 128/334 (38.32%), Postives = 167/334 (50.00%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEG+ V+ GPA K   HF   GH  P   NPAEF  D++S+D+ASP+AE +S+ R+A   +             W                                           V  + AGA               +G      S V G+                 VV+RR     RAG + Q RLLL RSWRQV R +  NV+R ++NL SA++FG+IF+++   QS+I DR+GLLQ A I  AM+++ KTL  FP E TIV  ER+ Q Y +LPY  +K+ AELPI ALFP +FG I+Y   GLHP   R
Sbjct:  275 QPRSSIFAMFDDLVLLSEGQPVYSGPADKALEHFASLGHHCPEHFNPAEFLADLISIDFASPEAEADSRARLAKLVA------------AWRD-----------------------------------------VEQRQAGA---------------IGNGNGLPSSVSGE-----------------VVLRRSEALPRAGPLRQLRLLLVRSWRQVLRDRATNVSRAMSNLSSAIVFGAIFFRMRYKQSNIQDRMGLLQVAAINTAMASLVKTLNIFPRERTIVARERARQSYGILPYLTAKLAAELPIGALFPLLFGAIVYPTCGLHPSATR 523          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A383W642_TETOB (ABC transporter domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W642_TETOB)

HSP 1 Score: 194 bits (492), Expect = 1.850e-52
Identity = 126/334 (37.72%), Postives = 169/334 (50.60%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF + DDL++LSEGR V+ GPA++   +F   GH+ P   NPAEF  D++S+DY+SP+ EEESK R+      +A SA                                                 G  AA +A A    +     + E  LG   S                  G VA               G   QFRLLL RSWRQ+ R K A + R+ +N+ SAVIFG+IFW++   QS+I DR+GLLQ A I  AMS + KT+  FP E  IV  ER+ + Y+VLPY  +K++AELP+S +FP +FG+++Y  TGL+PK  R
Sbjct:  292 QPRSSIFGLFDDLLLLSEGRCVYSGPAEEALPYFEQLGHSCPAHYNPAEFVADLISIDYSSPEVEEESKARVQGLVDAWAASA-------------------------------------------------GGKAAAEAAAAHKHMSR-TPSGELALGSVNS------------------GPVA---------------GWARQFRLLLRRSWRQITRDKAAAMARLSSNVSSAVIFGAIFWRMQKKQSNIQDRMGLLQVAAINTAMSALVKTITVFPKERAIVNRERTRKAYNVLPYLSAKLLAELPVSCVFPLVFGVVVYPFTGLNPKPVR 542          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A7J7Q7J4_9CHLO (ABC-2 type transporter-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q7J4_9CHLO)

HSP 1 Score: 191 bits (485), Expect = 1.100e-51
Identity = 131/334 (39.22%), Postives = 169/334 (50.60%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEGR V+ GPA +   +F   GHA P + NPAEF  D++S+DY+SP+ E ESK R+      +A SA                                                 G  AA DA A  + +   R              SGV     V+      G VAG      RR          QFRLLL RSWRQ+ R K A + R+ +NL SA IFG+IFW++   QS I DR+GLLQ A I  AMS + KT+  FP E  IV  ER+ + Y+VLPY  +K++AELP+S +FP +FG ++Y  TGL+PK  R
Sbjct:  294 QPRSSIFGMFDDLLLLSEGRCVYSGPADEALPYFEQLGHACPRNYNPAEFVADLISIDYSSPEVEGESKARVQALVDAWAGSA-------------------------------------------------GGKAAADAAAAHTHLARSR--------------SGVPALGAVST-----GPVAGW-----RR----------QFRLLLRRSWRQITRDKAAAMARLSSNLSSAAIFGAIFWRMQKKQSSIQDRMGLLQVAAINTAMSALVKTITVFPKERAIVNRERTRKAYNVLPYLSAKLLAELPVSCVFPLVFGGVVYPFTGLNPKPIR 544          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: D8ULB6_VOLCA (ATP-binding cassette transporter n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8ULB6_VOLCA)

HSP 1 Score: 189 bits (479), Expect = 1.790e-51
Identity = 125/335 (37.31%), Postives = 159/335 (47.46%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRS-KGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEG+ V+ GPA K   HF   GH  P   NPAEF  D++S+D+A+ DAE ES+ R+                                                                                  E  +  WR+ + SG  G                   V+RR     RAG V Q  LLLSRSWRQV R K  NV R ++NL SA++FG+IF+++  GQS I DR+GLLQ A I  AMS++ KTL  FP E TIV  ER+ Q Y +LPY  +K+ AELP+ ALFP +FG ++Y   GLHP   R
Sbjct:  272 QPRSSIFAMFDDLVLLSEGQPVYSGPADKALDHFASLGHVCPEHYNPAEFLADLISIDFANKDAEAESRARL----------------------------------------------------------------------------------ERLVTAWRAIEQSGAYGGNXXXXXXXXXXXXXXXEGVMRRAALLPRAGPVRQLSLLLSRSWRQVTRDKATNVARAMSNLSSALVFGAIFFRMKRGQSSIQDRMGLLQVAAINTAMSSLVKTLNIFPRERTIVARERARQSYGILPYLSAKLAAELPVGALFPLLFGALVYPACGLHPSLPR 524          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A2K3D6G1_CHLRE (ABC transporter domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D6G1_CHLRE)

HSP 1 Score: 190 bits (483), Expect = 2.830e-51
Identity = 125/334 (37.43%), Postives = 164/334 (49.10%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEG+ V+ GPA +  AHF   GH  P   NPAEF  D++S+D+ASP+AE +S+ R+    S             W                                             AK+A                 + R                      + A   +V+RR     RAG + Q RLLL RSWRQV R K  NV R ++NL SAV+FG+IF+++  GQS+I DR+GLLQ A I  AM+++ KTL  FP E TIV  ER+   YS+L Y  +K+ AELP+ ALFP +FG I+Y + GLHP   R
Sbjct:  273 QPRSSIFAMFDDLVLLSEGQPVYSGPADQALAHFEALGHVCPEHFNPAEFLADLISLDFASPEAEADSRARLDKLVS------------AW--------------------------------------------RAKEAAXXXXXXXXXXXXXXXDMMR----------------------RTASTDLVMRRAAELPRAGPLRQLRLLLVRSWRQVVRDKATNVARAMSNLSSAVVFGAIFFRMRRGQSNIQDRMGLLQVASINTAMASLVKTLNIFPRERTIVARERARGSYSILSYLSAKLAAELPVGALFPLLFGAIVYPVCGLHPSLPR 528          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A835WFU1_9CHLO (ABC transporter domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WFU1_9CHLO)

HSP 1 Score: 189 bits (481), Expect = 5.250e-51
Identity = 121/334 (36.23%), Postives = 166/334 (49.70%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEG+ V+ GPA +  AHF   GH  P   NPAEF  D++S+D+ASP+AE +S+ R+    +             W                                             AK+A A  +              +  ++ +  D                   +V+RR     RAG + Q RLLL RSWRQV R +  N +R ++NL SA++FG+IF+++  GQS I DR+GLLQ A I  AM+++ KTL  FP E TIV  ER+   Y +LPY  +K+ AELP+ ALFP +FG I+Y + GLHP   R
Sbjct:  273 QPRSSIFAMFDDLVLLSEGQPVYSGPADQALAHFEALGHHCPEHYNPAEFLADLISLDFASPEAEADSRARLNKLVA------------AW--------------------------------------------RAKEATAAATXXXXXXXXXXXXXXKDMARAASTD-------------------LVMRRAAELPRAGPLRQLRLLLVRSWRQVVRDRATNFSRAMSNLSSAIVFGAIFFRMRTGQSSIQDRMGLLQVASINTAMASLVKTLNIFPRERTIVARERARGAYGILPYLSAKLAAELPVGALFPLLFGAIVYPVCGLHPSLPR 531          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A836CJY0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJY0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 9.850e-51
Identity = 130/336 (38.69%), Postives = 169/336 (50.30%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPP-DTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQ-MYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPR SI  +LDD++VLSEG+VV+ GP  KV +         P  +TNPAEFAID+VS+DY+S +AE ES+ R+    S                                           + +   N        AA DA              ++   RW   G                        VVRR   + + G++ QFRLLL RSWRQVNR KFAN TR +  +GSA+IFG+IFWKL   QS INDR+GLLQ A I  AMS V   L  F  E  IV+ ERS    Y +LPYFL+K++AELP+S + P+IFG+++Y M GL+ K +R
Sbjct:  209 QPRGSIVDLLDDMLVLSEGKVVYSGPTDKVVSKLSSALGVHPSKNTNPAEFAIDLVSIDYSSKEAEAESRERLQVLRS-------------------------------------------VHVEAHN--------AALDA-------------VKALDHRWSGNGK----------------------PVVRR---TGQLGVIGQFRLLLQRSWRQVNRCKFANFTRAMTQVGSALIFGAIFWKLDFSQSRINDRLGLLQVASINTAMSVVVGALRVFLTERGIVERERSRAGSYGILPYFLAKLVAELPMSGILPSIFGVLVYKMGGLNTKPER 455          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A8J4B572_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B572_9CHLO)

HSP 1 Score: 187 bits (476), Expect = 3.090e-50
Identity = 124/334 (37.13%), Postives = 165/334 (49.40%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLGRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEG+ V+ GPA +   HF    H  P   NPAEF  D++S+DY + + E ES+ R+    +             W    S  S+G +D +  G                               G T  T +                       EGV              VV+RR     R+G V Q RLLL+RSWRQV R K  N+ R ++NL SA++FG+I++++  GQS I DR+GLLQ A I  AMS++ KTL  FP E TIV  ER+ Q Y +L Y  +K+ AELP+ ALFP +FG ++Y   GLHP   R
Sbjct:  275 QPRSSIFAMFDDLVLLSEGQPVYSGPAPEALDHFARLSHVCPEHFNPAEFLADLISIDYTNKEVEAESRARLERLVA------------AWRKVESGSSTGNNDRQPSG-------------------------------GLTVGTNDS----------------------EGVEAA-----------VVMRRVALMPRSGPVRQLRLLLTRSWRQVVRDKATNMARAMSNLSSALVFGAIYFRMKRGQSSIRDRMGLLQVAAINTAMSSLVKTLNIFPRERTIVARERARQSYDILSYLSAKLAAELPVGALFPVLFGTLVYPTCGLHPSLAR 532          
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Match: A0A8J4C8S2_9CHLO (ABC transporter domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8S2_9CHLO)

HSP 1 Score: 183 bits (465), Expect = 5.330e-50
Identity = 122/337 (36.20%), Postives = 165/337 (48.96%), Query Frame = 1
Query:    1 QPRSSIFRMLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVDYASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKPGRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFLG---RWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRLLLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGLLQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAELPISALFPNIFGIILYHMTGLHPKRDR 1002
            QPRSSIF M DDL++LSEG+ V+ GPA++   HF   GH  P   NPAEF  D++S+DY + + E ES+ R+                                                             +VAA             RE    + G   R  S G  V  ++    EA          VV+RR     R+G + Q RLLL+RSWRQV R K  N+ R  +NL SA++FG+IF+++   QS + DR+GLLQ A I  AMS++ KT+  FP E TIV  ER+ Q Y +LPY  +K+ AELP+ A+FP +FG ++Y   GLHP   R
Sbjct:  168 QPRSSIFVMFDDLVLLSEGQPVYSGPAREALDHFGRLGHVCPEHYNPAEFLADLISIDYTNKEVEAESRARLER-----------------------------------------------------------LVAAW------------REVENGYAGNGGRQPSGGLTVGTNDSDGAEA---------DVVMRRAALMPRSGPLRQLRLLLTRSWRQVVRDKATNMARATSNLFSALLFGAIFFRMKRSQSSVQDRMGLLQVAAINTAMSSLVKTITIFPKERTIVARERARQSYGILPYLSAKLAAELPVGAIFPVLFGALVYPTCGLHPSLAR 424          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10390.283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI7_ECTSI9.080e-8450.15White-brown-complex ABC transporter family (Partia... [more]
A0A150GTS9_GONPE5.440e-5438.32ABC transporter domain-containing protein n=1 Tax=... [more]
A0A383W642_TETOB1.850e-5237.72ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7J7Q7J4_9CHLO1.100e-5139.22ABC-2 type transporter-domain-containing protein n... [more]
D8ULB6_VOLCA1.790e-5137.31ATP-binding cassette transporter n=1 Tax=Volvox ca... [more]
A0A2K3D6G1_CHLRE2.830e-5137.43ABC transporter domain-containing protein n=3 Tax=... [more]
A0A835WFU1_9CHLO5.250e-5136.23ABC transporter domain-containing protein n=1 Tax=... [more]
A0A836CJY0_9STRA9.850e-5138.69P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8J4B572_9CHLO3.090e-5037.13ABC transporter domain-containing protein n=1 Tax=... [more]
A0A8J4C8S2_9CHLO5.330e-5036.20ABC transporter domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10390contigS-dermatodea_contig10390:3143..7696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.9
Seed ortholog evalue3.8e-70
Seed eggNOG ortholog2880.D8LKI7
KEGG koko:K21396
KEGG TC3.A.1.204
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0008150,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031967,GO:0031975,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Exons6
Model size1005
Cds size981
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924154.7471976-CDS-S-dermatodea_contig10390:3142..32891622924154.7471976-CDS-S-dermatodea_contig10390:3142..3289Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 3143..3289 -
1694079055.0760543-CDS-S-dermatodea_contig10390:3142..32891694079055.0760543-CDS-S-dermatodea_contig10390:3142..3289Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 3143..3289 -
1622924154.7632685-CDS-S-dermatodea_contig10390:3980..40581622924154.7632685-CDS-S-dermatodea_contig10390:3980..4058Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 3981..4058 -
1694079055.0878377-CDS-S-dermatodea_contig10390:3980..40581694079055.0878377-CDS-S-dermatodea_contig10390:3980..4058Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 3981..4058 -
1622924154.7792969-CDS-S-dermatodea_contig10390:4759..48581622924154.7792969-CDS-S-dermatodea_contig10390:4759..4858Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 4760..4858 -
1694079055.0971217-CDS-S-dermatodea_contig10390:4759..48581694079055.0971217-CDS-S-dermatodea_contig10390:4759..4858Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 4760..4858 -
1622924154.788813-CDS-S-dermatodea_contig10390:5623..60031622924154.788813-CDS-S-dermatodea_contig10390:5623..6003Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 5624..6003 -
1694079055.1064405-CDS-S-dermatodea_contig10390:5623..60031694079055.1064405-CDS-S-dermatodea_contig10390:5623..6003Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 5624..6003 -
1622924154.8008757-CDS-S-dermatodea_contig10390:6069..61841622924154.8008757-CDS-S-dermatodea_contig10390:6069..6184Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 6070..6184 -
1694079055.1160576-CDS-S-dermatodea_contig10390:6069..61841694079055.1160576-CDS-S-dermatodea_contig10390:6069..6184Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 6070..6184 -
1622924154.8090951-CDS-S-dermatodea_contig10390:7510..76721622924154.8090951-CDS-S-dermatodea_contig10390:7510..7672Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 7511..7672 -
1694079055.1268048-CDS-S-dermatodea_contig10390:7510..76721694079055.1268048-CDS-S-dermatodea_contig10390:7510..7672Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10390 7511..7672 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924154.8165643-UTR-S-dermatodea_contig10390:7672..76961622924154.8165643-UTR-S-dermatodea_contig10390:7672..7696Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10390 7673..7696 -
1694079055.1346445-UTR-S-dermatodea_contig10390:7672..76961694079055.1346445-UTR-S-dermatodea_contig10390:7672..7696Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10390 7673..7696 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10390.283.1prot_S-dermatodea_contig10390.283.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10390 3143..7672 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10390.283.1

>prot_S-dermatodea_contig10390.283.1 ID=prot_S-dermatodea_contig10390.283.1|Name=mRNA_S-dermatodea_contig10390.283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=327bp
MLDDLIVLSEGRVVFKGPAKKVAAHFRGKGHAIPPDTNPAEFAIDVVSVD
YASPDAEEESKRRIANFASDFAPSATPAPFSTWFSPSSAPSSGKSDSEKP
GRRAASSSSSDDIGISTRNRRRVRGIVAAKDAGATTSTVEEGRETTESFL
GRWRSKGSGVDGDEGVACEAGGGGKVAGKGVVVRRRPRSERAGIVEQFRL
LLSRSWRQVNRAKFANVTRVVANLGSAVIFGSIFWKLGLGQSHINDRVGL
LQTAVIQCAMSTVAKTLVTFPAESTIVKAERSLQMYSVLPYFLSKMIAEL
PISALFPNIFGIILYHMTGLHPKRDR*
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mRNA from alignment at S-dermatodea_contig10390:3143..7696-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10390.283.1 ID=mRNA_S-dermatodea_contig10390.283.1|Name=mRNA_S-dermatodea_contig10390.283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4554bp|location=Sequence derived from alignment at S-dermatodea_contig10390:3143..7696- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGCCGCGGAGCTCGATCTTCCGGATGTTGGACGACCTGATCGTCCTGAG CGAGGGGCGGGTGGTGTTCAAGGGTCCCGCCAAGAAAGTCGCGGCGCACT TCCGAGGAAAAGGCCACGCCATCCCACCCGACACCAACCCGGCAGAATTT GCTATCGACGTCGTTTCAGTCGATTACGCGTCACCGGTGAGAGAAGATGT TTGCTCGGGATGTGCGTGGGTACACACGTGGCATTAGGGTGTAAGCGTTG CATGCGAAAGGTCGCGGGATTTCCCCGGGGAGAGTGTGAACGAATGGGAA AGAGCGCGAGCTTTTCGGGAACGCTCGGAGATGATAAGCGAGTTGCATGG CGAGTTTATGTTAGCGAAGCGAGAGGAGACCCGAGAGAGAGGCTCTGAAC TTCTTGCCTATGCAGACGCGGGAAACCGCGTCACTACAACTACCCTCTCG CTAGTGACTATTATAGTAGGTAGGCACGGCTACTCCCGTGAGGTGAAAAA TCCTACCAGTACTCTTTTCAACACTTGAGCGAGCTCGCTCTAGAATCAAG TTGTTTGGCATCAATTTGGCCCCTCTAAAATCGCTATGATTTGTGTTACG CAAAACCTGTAGGAAACAGTGTGGGCGTGGTCACTCTAAAATCACTATTT TCGGAGGAACATAGTTAACAGGTCAAAATCTCATGGTCAGTAATACCCAA CTATTCCGACCTTTAATACCCTATGATAGCAACAACAAAAATCTCACGAA AAACAAAAAAACGAGATTATGGCCATATTCATGAACATCGACCTTGAAAT CTCGATAATTCCGGCCTATTTTGATTTTTCTAAGTTGAGACTTGTGGCAA ATTTGGACCTGTTAACCATGGTATAGTCTATTCCCCCGTAATAATCGAAA ACGGACAAAGCGGTATGAATCAATTCAGATAGCACATTCTCGCCGCCGTC TCGCTCGCCGCCATCGTCACCGCCGCCGCTGCCGCCTCTGCCTCCTCCTC CTCCGCCAAGGCCGCAGGTCTCGAACGACGTAGCAATGCTTGTCCGCGAC GGTAACGTCAAATCCCGATATATGTGGTTCACGGGTGCCCCTTGTATGTG GCTCTTTGTGTGCGCCCGTCCCTCGTGTTGCCGACCTTTTGAGAGGGGGC GCCCAATTTTCATACACATTGCTCAGTCGTTACTGACACTTAGTTATGTT GAGTGCCTAGACGATGCACCTCCACGTACAAGTAGCTTTTTATGAACACA GAACTGGCGTTGGGGTCCAACCAATATTTTTGGTAGAGGACAAAAGATGG CCCAATCTCCAAACCTCCCCCCCCCCCTTCCATCCCCATAATCGTTTTCA TACTGTTCAAGCTGTTGCTCCGCACCGGCCAGGGGGCGAGTTCGGAGCGT TTCAGGTCGATATTACATTTTTTTAAACACACAGAACACCACCCGGAGTG AGCCGTGAATCTATTATATCATGATGATATTCCCGTTTCTCCCCCGCGGC TGATTCGAGCAGGACGCCGAGGAGGAAAGCAAGCGGCGCATCGCTAACTT CGCCAGCGACTTCGCCCCTTCCGCCACGCCCGCGCCTTTCTCCACGTGGT TCTCTCCATCGTCGGCACCTTCTTCCGGTAAAGTCACCGGCCCCCTCGGC TCGGCCCGTATGACCGGGGTTCCCCACGGAGGCGGCACCGGAGGCAAATC TGACTCCGAGAAACCCGGCCGTCGTGCTGCGAGCAGCAGCAGCAGCGACG ACATCGGCATCAGTACCAGAAACCGCCGGCGCGTGCGAGGTATCGTGGCC GCGAAGGATGCAGGCGCGACGACATCGACCGTCGAAGAGGGGAGGGAAAC AACAGAGTCGTTCCTGGGGCGTTGGCGAAGCAAGGGGTCGGGGGTTGACG GAGATGAGGGCGTTGCATGTGAGGCCGGAGGCGGGGGGAAGGTGGCGGGC AAGGGGGTGGTCGTGAGGAGGCGGCCGCGCAGCGAGAGGGCCGGGATCGT GGAGCAGTTCCGCCTGCTGCTCTCGAGGTCGTGGAGGCAGGTCAACCGCG CCAAGTTTGCCAACGTCACGCGGGTGAGACGGACGTTGGTTGATTCAGGG GATGGCGGAAAGCGAAGTTTTACCTGCTTTACCTGACGCGGTGGCTCTCT GTTTGGGTCACAGCGCGGTTGACGTCAGTATATTGGGTGATAAGGCCAAA AATGTGTGTTTGTGTGGGGGGGGAGGGGAGGGGAGTTGCAGCGGAGGTCC TACAACACTGTTTTTCTTAAATAGTACTATGCTGTGCTTGAATTGTCTTC GTTTCACCTACATAATATTTACTATAGTTTAGTCGACATTACCACCTCAT TCGACGCCACCATGTCTGCTTTGCAAGGCGCGACGGCATCACGTTGGGTT TTCTACAAAAAAACAAAGCTACTGTAGATGCTTTCGCGCGCACGCGGGAG ATATAAACGTGTTACGCTGCTGCGCGGCGTTTCTTTGCGAACATAACCTC GTTCTATTCCTTTGCTTCGGCGTGCTCTGATACTTTGAAATAACCGTTTT GCTATTTGCGTGCCCGATTTTTTGCTCTTCTGAAGCCTCTCAAAACGTGT TGCTCACCTCGCGTCGCCCCGCCGACTTTGTGTTGCCAATTTTTTCTTAC CGACTGACATCCGCTAATTTCGCGCAGGGAAACGAAACGGTGCTTTTTCT CGCCGACTTATTCCAACGGTTCGCAGCTTTTGTCGCGCAAGCAATGAAAT CCTCCCGAAGACTTTGCTTGGCAACGTACACCAACTTTTGTCCCATCTCG CTTTCGTGCCCGAATGCACATGAATCACGACGACACAGGTGGTGGCGAAC CTGGGCTCCGCGGTCATCTTCGGCTCCATCTTCTGGAAGCTGGGTCTCGG ACAGTCCCACATCAACGATCGCGTCGGCTTGCTCCAGGTGCCGCGCAGGG TCCGTTTTGAGTCGAACATCGTCACTGCGGGTACTATCGGTACTTGATTA GATCGGCTGCTTGATTGCCACGCTTACAACCGACCGGCCCACCAATGGTT TTTGCCGGTTCCGCTCGTGGTCACATGAGAAATCGAGGAGATACCGAAAA ACAAAACCACCGAATTACCTGTACAGTACCAGTACATCATAAGAAAGAAT TGACACAAGCTCTCGGAATGCAGAGGGGACATGCCTCGGAGCTTGTGACG GTACTATATGACGTGGTCACGGGGTACACGCACCAGTGCACCACCCGTGC ATGCAAGCGAGCCGCGGTGCACGGGTTTTACTTTTCCACCGCCGAGAAGG GAAGGAGTAGCCACCGTTCCGATGCGCGAGCATACGGTGCATGGGTTCAT GCCCTCGAAAACGGGGGTAAGTCCCACAGTGATCCAAGGACGAGCAGACA GCGAGAGGGGTGCAGACCGTTTGGGACCCATCGGAAGTTATTTTGGTCGG CAATTCTTCGCCGGTGGAGGGTTATTTCTATGTACGCGTGTGGAGCGGCG GGTGATGCCTGGCCGAATGCACCGAAAAATCGGCGCCCTTGCCCTGTCAT CTGATTCGCCGCAAACAGCAGCTATGCGTTAAATCGCACGCCCCTCCCCC TCGTTTGCGCCCGGCTCCTCAAATCTGGGTTTTGGCAGACGGCAGTGATC CAGTGCGCCATGAGCACTGTGGCGAAAACTCTCGTGACGTTCCCCGCGGA GAGCACTATCGTCAAGGTATGTGGGATGCTTTTCCCGTGTCCTGCTTCTG CGTATCCTAGTTCGTGGCAAGCCGCGGTAATGCCCGTGTGATGGTGGCCG CGGGTGAAGAGCTCTCTCTCCGTGGTTTGACCCTCGAGACGGTGGTCGAG CGATCGCGCGGGCGCGCTGACGAGCTGTGCGGGGAATGCGTGCGATACTG CCGATGCGAATGTTTCAACCTGCAACGCACGTCTGGAAAATATTTGACTG CAATTTTGCACTATGCGTGGAGCACAGCGCACGGCGTGTGCGGGAAACGC TCTCCGTATCAAACTCTTCGTGGCGAGGAGAGAAGAGGAGAGGGGCCACG TTACGCGCCTGGCGGTATCATAGCTTGTCCAGTTGTTCCTGGTTTGCGCG ACTGTGCCTCAGCTGATGGGGAGGACTTCGAAGATAGGCGGTGTGGCTGT CGATTTACTGATTTTGTTGTTGTTTCGTGGGTGGCGTGGATGAGTTGGGA TGCGTTCAGGGGTAGAGGGTTCAAGCTCCGAACCTGAGTTCGGTTGTCGT TGATAGACACGAATGGGAACCTTTTGCGGCGTGGGCATCCGTGCGGTGCG ACTATCATGGCCCTTTAAACCTGTAGCCTTGTCGTTTAGTAGCTCTTATT CGATTCGGCGCCCTCACCCGTTTTAGCGCAACGCAACGACACGCTGAACG CGCGCAGGCCGAGAGGAGCTTGCAAATGTACAGCGTGCTGCCGTACTTTC TGTCTAAGATGATCGCCGAGTTGCCCATCAGCGCCCTGTTCCCCAACATC TTCGGCATCATTCTCTACCACATGACTGGGCTGCACCCCAAGCGCGACCG GTAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig10390:3143..7696-

>mRNA_S-dermatodea_contig10390.283.1 ID=mRNA_S-dermatodea_contig10390.283.1|Name=mRNA_S-dermatodea_contig10390.283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at S-dermatodea_contig10390:3143..7696- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTGGACGACCTGATCGTCCTGAGCGAGGGGCGGGTGGTGTTCAAGGG
TCCCGCCAAGAAAGTCGCGGCGCACTTCCGAGGAAAAGGCCACGCCATCC
CACCCGACACCAACCCGGCAGAATTTGCTATCGACGTCGTTTCAGTCGAT
TACGCGTCACCGATGTTGGACGACCTGATCGTCCTGAGCGAGGGGCGGGT
GGTGTTCAAGGGTCCCGCCAAGAAAGTCGCGGCGCACTTCCGAGGAAAAG
GCCACGCCATCCCACCCGACACCAACCCGGCAGAATTTGCTATCGACGTC
GTTTCAGTCGATTACGCGTCACCGGACGCCGAGGAGGAAAGCAAGCGGCG
CATCGCTAACTTCGCCAGCGACTTCGCCCCTTCCGCCACGCCCGCGCCTT
TCTCCACGTGGTTCTCTCCATCGTCGGCACCTTCTTCCGGACGCCGAGGA
GGAAAGCAAGCGGCGCATCGCTAACTTCGCCAGCGACTTCGCCCCTTCCG
CCACGCCCGCGCCTTTCTCCACGTGGTTCTCTCCATCGTCGGCACCTTCT
TCCGGCAAATCTGACTCCGAGAAACCCGGCCGTCGTGCTGCGAGCAGCAG
CAGCAGCGACGACATCGGCATCAGTACCAGAAACCGCCGGCGCGTGCGAG
GTATCGTGGCCGCGAAGGATGCAGGCGCGACGACATCGACCGTCGAAGAG
GGGAGGGAAACAACAGAGTCGTTCCTGGGGCGTTGGCGAAGCAAGGGGTC
GGGGGTTGACGGAGATGAGGGCGTTGCATGTGAGGCCGGAGGCGGGGGGA
AGGTGGCGGGCAAGGGGGTGGTCGTGAGGAGGCGGCCGCGCAGCGAGAGG
GCCGGGATCGTGGAGCAGTTCCGCCTGCTGCTCTCGAGGTCGTGGAGGCA
GGTCAACCGCGCCAAGTTTGCCAACGTCACGCGGGCAAATCTGACTCCGA
GAAACCCGGCCGTCGTGCTGCGAGCAGCAGCAGCAGCGACGACATCGGCA
TCAGTACCAGAAACCGCCGGCGCGTGCGAGGTATCGTGGCCGCGAAGGAT
GCAGGCGCGACGACATCGACCGTCGAAGAGGGGAGGGAAACAACAGAGTC
GTTCCTGGGGCGTTGGCGAAGCAAGGGGTCGGGGGTTGACGGAGATGAGG
GCGTTGCATGTGAGGCCGGAGGCGGGGGGAAGGTGGCGGGCAAGGGGGTG
GTCGTGAGGAGGCGGCCGCGCAGCGAGAGGGCCGGGATCGTGGAGCAGTT
CCGCCTGCTGCTCTCGAGGTCGTGGAGGCAGGTCAACCGCGCCAAGTTTG
CCAACGTCACGCGGGTGGTGGCGAACCTGGGCTCCGCGGTCATCTTCGGC
TCCATCTTCTGGAAGCTGGGTCTCGGACAGTCCCACATCAACGATCGCGT
CGGCTTGCTCCAGGTGGTGGCGAACCTGGGCTCCGCGGTCATCTTCGGCT
CCATCTTCTGGAAGCTGGGTCTCGGACAGTCCCACATCAACGATCGCGTC
GGCTTGCTCCAGACGGCAGTGATCCAGTGCGCCATGAGCACTGTGGCGAA
AACTCTCGTGACGTTCCCCGCGGAGAGCACTATCGTCAAGACGGCAGTGA
TCCAGTGCGCCATGAGCACTGTGGCGAAAACTCTCGTGACGTTCCCCGCG
GAGAGCACTATCGTCAAGGCCGAGAGGAGCTTGCAAATGTACAGCGTGCT
GCCGTACTTTCTGTCTAAGATGATCGCCGAGTTGCCCATCAGCGCCCTGT
TCCCCAACATCTTCGGCATCATTCTCTACCACATGACTGGGCTGCACCCC
AAGCGCGACCGGTAAGCCGAGAGGAGCTTGCAAATGTACAGCGTGCTGCC
GTACTTTCTGTCTAAGATGATCGCCGAGTTGCCCATCAGCGCCCTGTTCC
CCAACATCTTCGGCATCATTCTCTACCACATGACTGGGCTGCACCCCAAG
CGCGACCGGTAA
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