prot_S-dermatodea_contig10346.252.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10346.252.1
Unique Nameprot_S-dermatodea_contig10346.252.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length501
Homology
BLAST of mRNA_S-dermatodea_contig10346.252.1 vs. uniprot
Match: D8LCG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG8_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 2.330e-131
Identity = 253/531 (47.65%), Postives = 312/531 (58.76%), Query Frame = 0
Query:    1 AASEREALEQ-SHGLRSELKHAIRVARKTFGEGDRIESRWRRTTRLDKPRLDPEVWHPGRLVAVNKDGN-VDMVFEDGEQERLSGIPAKYVRLAP----------------------APSAPPRCTDHTLGHETPESPAPPEDVCSASRRKLAHIASAAKSIRSTWEEPVTMDQELARLRILWEEKMRGRPEWRASFPAAHFEATKMISIG-DVKAGWGGAQQR---------------RPLRKRRQARDTARCRRG-----------QPSRVCGLHDQLAVD----------TTRETLQQDTRGQSCATNGRADIITT------------CSALAQAQSNLVKTAMAYDRCVVGVRDCLDRGVAAFHVAQTYSEQQRAFDESTAAIGPAQPARAGYTNWRGRPIVGLQNATLDVAEAMDAWATQWAAARN---ETVGS----QETNKVAK----------APPFMWGGLPLASTIAGHSAKLLARVPEIEGWYGPGFPVRRNPFFLTYPIDDRPVTPRNALVRAYVNGEM 441
            AA  +E LEQ S GL  E+K A++VA  TF EGDR+ESRWRR TRLDK ++DP  WHPGR+V  +KDG  VD+VFEDG+ ERLSGI  K+VRLAP                      A  +  R +        P S    E VCSASR +LAHIA A K +R TWE+PV + QE+ARLR+L E KMRGRPEWR SFP   F ATK +  G    A  GG + R               R L+ +    D +R R              P+ V  +H +  +D          +T +   ++T  +S      +                  +AL +AQ+ LV  A+AYDR V G RDCLDRG AAF +A+TYSEQQ+AF+ESTA +GPAQPARAGYT+WRG P+VGLQ+ATLDV EAMDAWA +WAA +    +T G      E   V K          APPF+W G PL STI G SAKL+A  PE++GWYGPGFP+ RNPFFL YP+DDRPVTPR+ALVRA+VNGE+
Sbjct:  322 AARHQETLEQQSRGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXXXXXXXXXXXVMAAGVSGRRNSCDRRPSCVPTSAPTDELVCSASRGELAHIACATKFLRCTWEDPVPISQEMARLRMLEERKMRGRPEWRGSFPLVDFSATKRLPFGAGGMARTGGRRARNAAASAATAAVATRDRQLQAQGTVHDDSRTRLRTVQWSPSSSLKMPTTVPQVHREENIDRDQGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXGATALLEAQAKLVSAALAYDRYVAGARDCLDRGCAAFRLARTYSEQQKAFEESTAILGPAQPARAGYTDWRGSPVVGLQSATLDVVEAMDAWAAEWAADKGGKPDTGGGGNAFAEEGVVLKDGAVAEVAVAAPPFLWEGSPLVSTIIGQSAKLVAGAPELKGWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 852          
BLAST of mRNA_S-dermatodea_contig10346.252.1 vs. uniprot
Match: A0A6H5JB67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB67_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 5.710e-130
Identity = 253/544 (46.51%), Postives = 304/544 (55.88%), Query Frame = 0
Query:    1 AASEREALEQ-SHGLRSELKHAIRVARKTFGEGDRIESRWRRTTRLDKPRLDPEVWHPGRLVAVNKDGN-VDMVFEDGEQERLSGIPAKYVRLAP---------------------APSAPPRCTDHTLGHETPESPAPPEDVCSASRRKLAHIASAAKSIRSTWEEPVTMDQELARLRILWEEKMRGRPEWRASFPAAHFEATKMISIGDVKAGWGGAQQRRPLRKRR------------------QARDTAR------CRRGQPSRVCGLHDQLAVDTTRETLQQDT---RGQSCA---------TNGRA--------------------------DIITTCSALAQAQSNLVKTAMAYDRCVVGVRDCLDRGVAAFHVAQTYSEQQRAFDESTAAIGPAQPARAGYTNWRGRPIVGLQNATLDVAEAMDAWATQWAAARNETV------------------GSQETNKVAKAPPFMWGGLPLASTIAGHSAKLLARVPEIEGWYGPGFPVRRNPFFLTYPIDDRPVTPRNALVRAYVNGEM 441
            AA  +E LEQ S GL  E+K A++VA  TF EGDR+ESRWRR TRLDK ++DP  WHPGR+V  +K G+ VD+VFEDG+ ERLSGI  K+VRLAP                     A     R            +PAP E VCSA RR+LAHIA A KS+R TWE PV + QE+ARLR+L E KMR RPEWR SFP   F ATK +  G       G   R  +RK +                  QA+ T R       R  Q S    L   + V   +     D    +G  C          TN R+                                +AL  AQ+ LV  A+AYDRCV GVRDCLDRG AAF +A+TYSEQQ+AF+ESTA +GPAQPARAGY +WRG P+VGLQ+ATLDV EAMD WA +WA A+                      G+ E   VA APPF+W G PL ST+ G SAKL+A  PE++ WYGPGFP+ RNPFFL YP+DDRPVTPR+ALVRA+VNGE+
Sbjct:  240 AARHQETLEQQSQGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKGGDRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXLVSSGRDDDYVTAAGVTGRRNSCDRRPSCAPTPAPTELVCSAIRRELAHIACATKSLRCTWEVPVPISQEMARLRMLEERKMRSRPEWRGSFPLVDFSATKRLPFG------AGGMARTVVRKVKNTAASAVSAVLATRDHQLQAQSTVRDDSRTRLRTVQSSPSSSLKMPMTVPQVQRDENDDRDLGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXXXXXXXXXXTALLAAQAKLVSAAVAYDRCVAGVRDCLDRGCAAFRLARTYSEQQKAFEESTATLGPAQPARAGYKDWRGSPVVGLQSATLDVVEAMDDWAAEWAVAKGGKTDAGGGDNAFAEEGVVLKDGAVEEVAVA-APPFLWEGSPLVSTVIGQSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 776          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10346.252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCG8_ECTSI2.330e-13147.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB67_9PHAE5.710e-13046.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 24..95
e-value: 1.9E-5
score: 26.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10346contigS-dermatodea_contig10346:3678..5774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10346.252.1mRNA_S-dermatodea_contig10346.252.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10346 3678..5774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10346.252.1 ID=prot_S-dermatodea_contig10346.252.1|Name=mRNA_S-dermatodea_contig10346.252.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=501bp
AASEREALEQSHGLRSELKHAIRVARKTFGEGDRIESRWRRTTRLDKPRL
DPEVWHPGRLVAVNKDGNVDMVFEDGEQERLSGIPAKYVRLAPAPSAPPR
CTDHTLGHETPESPAPPEDVCSASRRKLAHIASAAKSIRSTWEEPVTMDQ
ELARLRILWEEKMRGRPEWRASFPAAHFEATKMISIGDVKAGWGGAQQRR
PLRKRRQARDTARCRRGQPSRVCGLHDQLAVDTTRETLQQDTRGQSCATN
GRADIITTCSALAQAQSNLVKTAMAYDRCVVGVRDCLDRGVAAFHVAQTY
SEQQRAFDESTAAIGPAQPARAGYTNWRGRPIVGLQNATLDVAEAMDAWA
TQWAAARNETVGSQETNKVAKAPPFMWGGLPLASTIAGHSAKLLARVPEI
EGWYGPGFPVRRNPFFLTYPIDDRPVTPRNALVRAYVNGEMVTTISPMIL
QEREKEELALAAVLGRQAAAPSWWPATRGSMSEAHYTRVRRAEKILLRED
S
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