prot_S-dermatodea_contig10338.249.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10338.249.1
Unique Nameprot_S-dermatodea_contig10338.249.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length192
Homology
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: D7FY86_ECTSI (Meiotic recombination protein DMC1/LIM15 homolog, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY86_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.680e-104
Identity = 163/192 (84.90%), Postives = 173/192 (90.10%), Query Frame = 0
Query:    1 QSVDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            Q V+ELT AGIKMAEINKLKEA++ATVGAVLATPTK         LLTIRGFS+ATV K+  AAAKVD SGSSG+F+TGLQCR AR+KVIKVHTGSKQLDALLGGGIET SITEFFGEFRSGKTQL HTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDP+ETLENV VTRVFNHEQQI+
Sbjct:   30 QCVEELTNAGIKMAEINKLKEANLATVGAVLATPTKR--------LLTIRGFSDATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQID 213          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A0A1J4KIK7_9EUKA (Meiotic recombination protein DMC1 like protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KIK7_9EUKA)

HSP 1 Score: 194 bits (493), Expect = 4.790e-58
Identity = 107/191 (56.02%), Postives = 133/191 (69.63%), Query Frame = 0
Query:    2 SVDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            S+++L +AGI  A+I KLKEA I TVGAVL   TK R       L  ++G S+A V K+ AAA  +D S S   F +G +C   RQ+VI + TGS +LD LLGGGIE+ SITE FGEFR+GKTQL HTLCVTSQL    GG  G+VVY+DTEG FRPER+  IA RFG+DP+E L+N+   R F HEQQ++
Sbjct:   22 SIEKLVQAGINAADIKKLKEAGICTVGAVLME-TKKR-------LANVKGISDAKVDKIIAAATSLDTSFS---FMSGNECLNRRQRVIHITTGSSELDKLLGGGIESMSITEVFGEFRTGKTQLCHTLCVTSQLPINQGGGAGKVVYIDTEGTFRPERIPTIAARFGVDPNEVLDNILYARAFTHEQQMQ 201          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A0A835YPZ9_9STRA (DMC1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.120e-55
Identity = 103/191 (53.93%), Postives = 134/191 (70.16%), Query Frame = 0
Query:    3 VDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVD-RSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            +++L K  I  A+I KLKE  IATVG +   P K         L  IRGFSE  V K+   A KVD R+G   +F++G++ R  R+ VIK+ TGS  LD +LGGG+ET SITEF+GEFR+GKTQ+MHTL VT+QL  +SGG  GRVV++DTE NFRPER+E IAERFG+D +E LEN+F  +  +HEQQ++
Sbjct:   31 IEQLAKHAINAADIQKLKEQGIATVGMLFQCPLKT--------LHDIRGFSETKVAKILETARKVDPRAGI--IFRSGIEARDERRNVIKITTGSAGLDGILGGGVETGSITEFYGEFRTGKTQMMHTLAVTAQLDIQSGGGAGRVVFIDTENNFRPERIENIAERFGIDGNEVLENIFHCQPQSHEQQMD 211          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A0A482S2G5_9ARCH (RECA_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2G5_9ARCH)

HSP 1 Score: 181 bits (460), Expect = 2.270e-55
Identity = 92/166 (55.42%), Postives = 125/166 (75.30%), Query Frame = 0
Query:   26 TVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQI 191
            TVG+VL   T+         LLTI+G +EA V K+  AA K+D  G+  +F+TG++ +  R+ ++ + TG+  LD +LGGGIETSSITE FGEFR+GKTQL HTLCVT+QLS +  G +G+V+Y+DTEGNFRPER+E+IAERFGLD  +TL+N+ V RVF+HE+Q+
Sbjct:    2 TVGSVLQCATRE--------LLTIKGITEARVEKIKEAAKKLDLRGN--MFKTGVEVKEKRKSIVHITTGATSLDKILGGGIETSSITELFGEFRTGKTQLSHTLCVTTQLSFDMHGGQGKVIYLDTEGNFRPERIESIAERFGLDAEQTLDNIIVCRVFSHEEQM 157          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: W7TD93_9STRA (Dna repair protein DMC1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD93_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.240e-55
Identity = 96/184 (52.17%), Postives = 127/184 (69.02%), Query Frame = 0
Query:    2 SVDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVF 185
            +V EL K G+  A+I KL EA I+T G V   P K        +LL I+GFSEA V K+ ++A K+   G+S  F+TG + R  R++ IK+ TG+K  DA+LGGG+E+ SITE +GEFR+GKTQL HTL VT QL  + GG +G+ +Y+DTEGNFRPER+E IAERFGLD   TL+N+ V R +
Sbjct:    9 NVSELQKLGVNAADIAKLVEAGISTAGMVCKVPLK--------VLLAIKGFSEAKVEKIRSSARKLT-GGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIAERFGLDADATLDNIIVARAY 183          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A0A4D9CQI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQI8_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.630e-55
Identity = 98/191 (51.31%), Postives = 131/191 (68.59%), Query Frame = 0
Query:    2 SVDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            +V EL K G+  A+I KL EA I+T G V   P K        +LL I+GFSEA V K+ ++A K+   G+S  F+TG + R  R++ IK+ TG+K  DA+LGGG+E+ SITE +GEFR+GKTQL HTL VT QL  + GG +G+ +Y+DTEGNFRPER+E IA+RFGLD   TL+N+ V R +  +QQ E
Sbjct:   32 NVSELQKLGVNAADIAKLVEAGISTAGMVCKVPLK--------VLLAIKGFSEAKVEKIRSSARKLT-GGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIADRFGLDADATLDNIIVARAYASDQQCE 213          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A2FY08_TRIVA (Meiotic recombination protein DMC1/LIM15 homolog, putative n=2 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2FY08_TRIVA)

HSP 1 Score: 180 bits (456), Expect = 1.810e-52
Identity = 97/191 (50.79%), Postives = 128/191 (67.02%), Query Frame = 0
Query:    2 SVDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            S+++L +AGI +A+I KLKEA I TVGAVL    K         L  ++G S+A V K+ AAA  ++    S  F +G  C   R KVI++ +GS +LD LLGGG+E+ SITE FGEFR+GKTQL HTLCVT+QL     G +G+V ++DTEG FRPER+  IA+RFG+D  E LEN+   R F HEQQ++
Sbjct:   23 SIEKLQQAGINIADIKKLKEAGICTVGAVLMETKKH--------LANVKGISDAKVDKLIAAAQSLESE--SFTFISGATCLKNRSKVIRITSGSTELDKLLGGGVESMSITEVFGEFRTGKTQLCHTLCVTAQLPLSQSGGQGKVCFIDTEGTFRPERIPVIAQRFGVDGDEALENILYARAFTHEQQMQ 203          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A0A8H7SE14_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SE14_9FUNG)

HSP 1 Score: 179 bits (453), Expect = 6.740e-52
Identity = 100/192 (52.08%), Postives = 125/192 (65.10%), Query Frame = 0
Query:    2 SVDELTKAGIKMAEINKLKEAHIATV-GAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            S+DEL   GI MA+INKLK A + TV GA +              LL I+G SE  V K+  AA+K    G    F TG +    RQKV+K+ TGSKQ DALLGGGI+T SITE FGE+R+GKTQL HT+CV  QLS E GGA  +V Y+DTEG FRP+R+ +IAERFG DP   L+N+ V R +N + Q++
Sbjct:   32 SIDELQAHGIGMADINKLKGAGVCTVRGAQMMIKKN---------LLKIKGLSETKVDKIKDAASKTQGCG----FMTGSELAHHRQKVVKISTGSKQFDALLGGGIQTMSITEVFGEYRTGKTQLAHTMCVQVQLSAEHGGASSKVAYIDTEGTFRPDRIRSIAERFGADPEVVLDNIIVARAWNSDHQMD 210          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: B6K203_SCHJY (RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K203_SCHJY)

HSP 1 Score: 177 bits (449), Expect = 1.920e-51
Identity = 93/190 (48.95%), Postives = 131/190 (68.95%), Query Frame = 0
Query:    3 VDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            ++ELT  GI M +I +LK+A I TV  V  +  +         LL I+GFSEA V K+  AA+K+  +     F T ++   +R++V  + TGSK  DA+LGGG+++ SITE FGEFR GKTQ+ HTLCVT+QL +E GGAEG+V ++DTEG FRP+R+ AIAERFG+D  + +EN+ V+R +N EQQ++
Sbjct:   22 IEELTAQGIGMTDIIRLKQAGICTVQGVQMSTKR--------FLLKIKGFSEAKVDKLKEAASKLCPAN----FATAMEISQSRKRVWSISTGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAERFGVDADQAMENIIVSRAYNSEQQMD 199          
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Match: A0A8H7V7F4_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V7F4_9FUNG)

HSP 1 Score: 176 bits (447), Expect = 6.040e-51
Identity = 99/190 (52.11%), Postives = 123/190 (64.74%), Query Frame = 0
Query:    3 VDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIRGFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLDALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE 192
            VDEL   GI +A+I KLK A + TV  V     K         LL I+G SE  V K+  AA K     S   F T  Q  V R+KV+K+ TGSKQLDALLGGGI+T S+TE FGE+R+GKTQL HTLCV  QLS E GGA  +  Y+DTEG FRP+R+ +IA+RFG+DP   L+N+ V R +N +QQ+E
Sbjct:   39 VDELQMHGIGVADITKLKSAGVCTVRGVQMMTKKN--------LLKIKGLSETKVDKIKEAAIK-----SQARFVTAKQIAVQREKVVKISTGSKQLDALLGGGIQTMSLTEVFGEYRTGKTQLAHTLCVQVQLSPEDGGANSKAAYIDTEGTFRPDRIISIADRFGVDPEIVLDNIVVARAWNSDQQME 215          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10338.249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY86_ECTSI1.680e-10484.90Meiotic recombination protein DMC1/LIM15 homolog, ... [more]
A0A1J4KIK7_9EUKA4.790e-5856.02Meiotic recombination protein DMC1 like protein n=... [more]
A0A835YPZ9_9STRA1.120e-5553.93DMC1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A482S2G5_9ARCH2.270e-5555.42RECA_2 domain-containing protein n=1 Tax=archaeon ... [more]
W7TD93_9STRA3.240e-5552.17Dna repair protein DMC1 n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CQI8_9STRA6.630e-5551.31Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A2FY08_TRIVA1.810e-5250.79Meiotic recombination protein DMC1/LIM15 homolog, ... [more]
A0A8H7SE14_9FUNG6.740e-5252.08Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
B6K203_SCHJY1.920e-5148.95RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyce... [more]
A0A8H7V7F4_9FUNG6.040e-5152.11Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.20coord: 1..78
e-value: 1.9E-11
score: 45.8
NoneNo IPR availableGENE3D3.40.50.300coord: 79..192
e-value: 7.2E-38
score: 132.5
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 2..192
NoneNo IPR availablePANTHERPTHR22942:SF30MEIOTIC RECOMBINATION PROTEIN DMC1/LIM15 HOMOLOGcoord: 2..192
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 76..191
e-value: 1.3E-46
score: 158.9
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 88..192
score: 29.622
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 90..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10338contigS-dermatodea_contig10338:2835..7878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10338.249.1mRNA_S-dermatodea_contig10338.249.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10338 2834..7878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10338.249.1 ID=prot_S-dermatodea_contig10338.249.1|Name=mRNA_S-dermatodea_contig10338.249.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp
QSVDELTKAGIKMAEINKLKEAHIATVGAVLATPTKARCLARTLILLTIR
GFSEATVGKVHAAAAKVDRSGSSGVFQTGLQCRVARQKVIKVHTGSKQLD
ALLGGGIETSSITEFFGEFRSGKTQLMHTLCVTSQLSKESGGAEGRVVYM
DTEGNFRPERVEAIAERFGLDPSETLENVFVTRVFNHEQQIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase