prot_S-dermatodea_contig10290.219.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10290.219.1
Unique Nameprot_S-dermatodea_contig10290.219.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length525
Homology
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A6H5JF87_9PHAE (Fip1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF87_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 4.640e-69
Identity = 160/299 (53.51%), Postives = 184/299 (61.54%), Query Frame = 0
Query:  213 DGFRIVVGRAAPSPXXXXXXXXAKRFLRGTNTLVNANTTTIAGSGDSRSTPSSKPVSAAAGIASLVPSKGAPVAAARPSLKPGEYPPTAELQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNRYDQTLGRPKNTNIMGGRGGGGNYMRHGGASGARRGGDSQVGRLPAGVRPVQLH--NSGPERSNFASKGLAGNG--WGGGA--------APERFAHGFGSXXXXLPGVGHGHASSSP-WFDG---PSQQMRPG--------------NRQNFGPGPA 481
            DGFR+VVGR   +P         KRFLRGTNTLVN+ TT       S +T +SKPVSAAAGIASLVPSKGAPVA A+PSLKPGEYPPTAELQQS G+TAFDVDIDGMEEQPWRH GVDIADFFNYGFTE+SWRVYCEKQLRNRYD+T+GR ++    G            G+SG  R G       P    P+Q+H  N+ P  +NF  +GL G    WGG           PE F  GFGS     P  G G +++SP W DG   P  Q++                NRQ+FGPG A
Sbjct:  247 DGFRVVVGREGVAPAAAPVVP-TKRFLRGTNTLVNSTTT-------SGTTATSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRSGKSAGXXX---XXXXXSGSSGPPRHGRVVNSLQPQQRPPIQVHHNNNPPGPNNFRPQGLTGGNVLWGGXXXXXXXXXPGPEGFPQGFGSR----PPAG-GQSNASPLWLDGQQPPHLQLQXXXXXXXXXXXXXXXHNRQHFGPGSA 529          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: D8LU95_ECTSI (Fip1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU95_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.620e-65
Identity = 122/162 (75.31%), Postives = 131/162 (80.86%), Query Frame = 0
Query:  214 GFRIVVGRAAPSPXXXXXXXXAKRFLRGTNTLVNANTTTIAGSGDSRSTPSSKPVSAAAGIASLVPSKGAPVAAARPSLKPGEYPPTAELQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNRYDQTLGRPKNTNIMGGRGGG 375
            GFR+VVGR A +P         KRFLRGTNTLVNA TT         +T SSKPVSAAAGIASLVPSKGAPVA A+PSLKPGEYPPTAELQQS G+TAFDVDIDGMEEQPWRH GVDIADFFNYGFTE+SWRVYCEKQLRNRYD+T+GR +N    GGR GG
Sbjct:  249 GFRVVVGREAVAPAAAPVVP-TKRFLRGTNTLVNATTT-------GGTTASSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAGGRVGG 402          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A835YKB3_9STRA (Fip1 motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.800e-15
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 0
Query:  296 EYPPTAELQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNRYDQ 358
            +YPP  ELQ   GR+AF V +D +E+ PWR  GVD++DFFNYGFTE +WR Y   QLR RYD+
Sbjct:  206 DYPPLEELQLRYGRSAFGVRMDELEDTPWRRPGVDLSDFFNYGFTEGTWRAYLLAQLRLRYDK 268          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A7S4DHM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHM3_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 1.880e-14
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0
Query:  296 EYPPT-AELQQSNGR-TAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNRYDQ 358
            E+PP   ELQ    R +AFD++IDG+++ PWR  GVDI+D+FNYG TE++WR YC KQL  RY+Q
Sbjct:  142 EFPPLPTELQHPGKRNSAFDIEIDGLDDHPWRRPGVDISDYFNYGLTEKTWREYCIKQLTLRYEQ 206          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A1V9YWA6_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWA6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.230e-14
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
Query:  289 RPSLKPGEYPPTAE----LQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNR 355
            +P +   +Y PT E    L     RTAFDVDID +EE+PWR  GVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  115 QPRIPSDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDETSWRDYCAKQLQKR 185          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A067C040_SAPPC (Fip1 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C040_SAPPC)

HSP 1 Score: 83.2 bits (204), Expect = 7.740e-14
Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  290 PSLKP----GEYPPTAE----LQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNR 355
            P L+P     +Y PT E    L     RTAFDVDID +EE+PWR  GVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  113 PPLQPRNPGDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 186          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: T0QKY1_SAPDV (Fip1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKY1_SAPDV)

HSP 1 Score: 83.2 bits (204), Expect = 1.260e-13
Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  290 PSLKP----GEYPPTAE----LQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNR 355
            P L+P     +Y PT E    L     RTAFDVDID +EE+PWR  GVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  116 PPLQPRNPGDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 189          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A1W0A514_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A514_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.290e-13
Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 0
Query:  296 EYPPTAE----LQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNR 355
            +Y PT E    L     RTAFDVDID +EE+PWR  GVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  112 QYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDESSWRDYCTKQLQKR 175          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A137P6A2_CONC2 (Fip1-domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6A2_CONC2)

HSP 1 Score: 78.2 bits (191), Expect = 8.260e-13
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  305 QSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNRYD 357
            Q NG +  D+D+DG+EEQPWR  G DI D+FNYGF E +WR YC KQ   R D
Sbjct:  141 QFNGESLLDLDLDGLEEQPWRKPGADITDYFNYGFNEVTWRAYCNKQKSMRED 193          
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Match: A0A6P4YC10_BRABE (Pre-mRNA 3'-end-processing factor FIP1 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YC10_BRABE)

HSP 1 Score: 78.2 bits (191), Expect = 1.050e-12
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  307 NGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEKQLRNRYDQTLGRP 363
            NG    D D+D +E++PWR  G DI D+FNYGF E+SW++YC+KQ R R D  L +P
Sbjct:  140 NGVPVIDFDLDTLEDKPWRKPGADITDYFNYGFNEDSWKIYCDKQKRLRMDTNLQKP 196          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10290.219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF87_9PHAE4.640e-6953.51Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU95_ECTSI1.620e-6575.31Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YKB3_9STRA4.800e-1558.73Fip1 motif-domain-containing protein n=1 Tax=Tribo... [more]
A0A7S4DHM3_HETAK1.880e-1456.92Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YWA6_9STRA4.230e-1456.34Pre-mRNA polyadenylation factor n=1 Tax=Achlya hyp... [more]
A0A067C040_SAPPC7.740e-1456.76Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
T0QKY1_SAPDV1.260e-1356.76Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A1W0A514_9STRA1.290e-1360.94Pre-mRNA polyadenylation factor n=1 Tax=Thraustoth... [more]
A0A137P6A2_CONC28.260e-1358.49Fip1-domain-containing protein n=1 Tax=Conidiobolu... [more]
A0A6P4YC10_BRABE1.050e-1252.63Pre-mRNA 3'-end-processing factor FIP1 n=1 Tax=Bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007854Pre-mRNA polyadenylation factor Fip1 domainPFAMPF05182Fip1coord: 313..354
e-value: 1.1E-20
score: 72.8
NoneNo IPR availablePANTHERPTHR36884FAMILY NOT NAMEDcoord: 309..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10290contigS-dermatodea_contig10290:4135..8002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10290.219.1mRNA_S-dermatodea_contig10290.219.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10290 3841..8074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10290.219.1 ID=prot_S-dermatodea_contig10290.219.1|Name=mRNA_S-dermatodea_contig10290.219.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=525bp
MARHAKIPSGKKGATSANTKSADGESSEAIPAHPDSPTAVKKEMPAGAGG
GEEEINEEEGGNDAGSASPAPALEEASAARKNTTKTTAEADASDAAGAEN
AEPKQAPGPDADTATKAKEDAEKQESETPPVAPEVKTEQKATEDGKQETA
SPAEAAAAKRKTEAKEQPGASGAVSKEQGGELETKGVVGDTSKARAEEKR
PGEDESSDEEDGDGFRIVVGRAAPSPAAPAPAAPAKRFLRGTNTLVNANT
TTIAGSGDSRSTPSSKPVSAAAGIASLVPSKGAPVAAARPSLKPGEYPPT
AELQQSNGRTAFDVDIDGMEEQPWRHSGVDIADFFNYGFTEESWRVYCEK
QLRNRYDQTLGRPKNTNIMGGRGGGGNYMRHGGASGARRGGDSQVGRLPA
GVRPVQLHNSGPERSNFASKGLAGNGWGGGAAPERFAHGFGSGSGSLPGV
GHGHASSSPWFDGPSQQMRPGNRQNFGPGPAGVQDGAGSLMRNSNGGIDA
SAGGRRSLSPDPRGGPGDKRARMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007854Fip1_dom