prot_S-dermatodea_contig13600.2088.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13600.2088.1
Unique Nameprot_S-dermatodea_contig13600.2088.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length299
Homology
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BLAST of mRNA_S-dermatodea_contig13600.2088.1 vs. uniprot
Match: A0A6H5K749_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 9.440e-107
Identity = 205/316 (64.87%), Postives = 235/316 (74.37%), Query Frame = 0 
Query:    1 MQVLDEGLKQYMDGDG--RDRSPRPSPLTWRRVSQAYLRPLLPSKLKAPTPEEVEAVKLNRSLGRALENNTALAEAVKSKDDLVKDLNSRIKQFQLHAVRRRKGYRALKLGLAELTREVQAKESMMTILAVCMFGTSSILEGMSSTLNAQHADIAALALLLIDREAKERALALEAESNAARLEDLGESLHRAESALSAVATSLGSGEDTVQRWK--VASGGTGGT------GDED----PLAELLHELHVAAAAKFITPLGLEPFTGAITVAVPQTATMPTAGQGAV--------RGRKSPG-FWGGVLGVLCCRR 293
            ++VLDEGLK +MDGDG  R +S R  PL+WRRVS AYLRPLLPSKLKAPTPEE+EA+KLNRSLGRALENNTALAEAV SKDDLVK+LNSRIKQFQLHAVRR+KGYRALKLGLAELT EVQAKE+MMTIL VCM GTSSILEGM ++L AQ A+IA +A +L DRE +   L +E E+  A L DL  SLH+ ESALSAVA SLG+ E+ VQRWK  VA+   G        GD+D    PL +LLHE+H AAA  F++PLGLEP TGAIT+AVP+       G            RG KSPG FW GV  +L CRR
Sbjct:  779 IEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSDAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKETMMTILTVCMLGTSSILEGMYASLEAQRANIAEIAEVLRDREERVEELTVEVENGTACLTDLQTSLHKTESALSAVAVSLGAEEECVQRWKDAVAAAALGRATPGEEPGDDDDGEGPLGQLLHEIHAAAAKTFVSPLGLEPSTGAITIAVPRPLDGEAGGXXXXXXXXXXVDRGTKSPGGFWAGVFDLLFCRR 1094
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BLAST of mRNA_S-dermatodea_contig13600.2088.1 vs. uniprot
Match: D7FUP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP1_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 7.930e-71
Identity = 125/150 (83.33%), Postives = 138/150 (92.00%), Query Frame = 0 
Query:    1 MQVLDEGLKQYMDGDG--RDRSPRPSPLTWRRVSQAYLRPLLPSKLKAPTPEEVEAVKLNRSLGRALENNTALAEAVKSKDDLVKDLNSRIKQFQLHAVRRRKGYRALKLGLAELTREVQAKESMMTILAVCMFGTSSILEGMSSTLNAQ 148
            ++VLDEGLK +MDGDG  R +S R  PL+WRRVS+AYLRPLLPSKLKAPTPEE+EA+KLNRSLGRALENNTALAEAV SKDDLVK+LNSRIKQFQLHAVRR+KGYRALKLGLAELT EVQAKE+MMTIL VCM GTSSILEGM +TL+AQ
Sbjct:  272 IEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKETMMTILTVCMLGTSSILEGMDATLDAQ 421
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13600.2088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K749_9PHAE9.440e-10764.87WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FUP1_ECTSI7.930e-7183.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13600contigS-dermatodea_contig13600:2311..6359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13600.2088.1mRNA_S-dermatodea_contig13600.2088.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13600 954..6602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13600.2088.1 ID=prot_S-dermatodea_contig13600.2088.1|Name=mRNA_S-dermatodea_contig13600.2088.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=299bp
MQVLDEGLKQYMDGDGRDRSPRPSPLTWRRVSQAYLRPLLPSKLKAPTPE
EVEAVKLNRSLGRALENNTALAEAVKSKDDLVKDLNSRIKQFQLHAVRRR
KGYRALKLGLAELTREVQAKESMMTILAVCMFGTSSILEGMSSTLNAQHA
DIAALALLLIDREAKERALALEAESNAARLEDLGESLHRAESALSAVATS
LGSGEDTVQRWKVASGGTGGTGDEDPLAELLHELHVAAAAKFITPLGLEP
FTGAITVAVPQTATMPTAGQGAVRGRKSPGFWGGVLGVLCCRRPTRES*
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