prot_S-dermatodea_contig13587.2078.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13587.2078.1
Unique Nameprot_S-dermatodea_contig13587.2078.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length125
Homology
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: D7FRG3_ECTSI (PObg2, plastid Obg/CgtA-like GTPase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRG3_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 3.310e-64
Identity = 104/125 (83.20%), Postives = 119/125 (95.20%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGSGEKRWLALELRLVADVGLVSGELAGR 125
            VCESSLNTLVNLRGT+SFVA++GT G+QRLTNGKDGGSIE+PVPPGTVV+DRDNGGV+LGELREGGERL+VAKGG+GGRGNAATK+TRGQAP+AS PG+GE+RWL+LELRLVADVGLV    AG+
Sbjct:  161 VCESSLNTLVNLRGTMSFVAQKGTAGQQRLTNGKDGGSIEVPVPPGTVVKDRDNGGVVLGELREGGERLVVAKGGFGGRGNAATKITRGQAPKASPPGAGERRWLSLELRLVADVGLVGVPSAGK 285          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A836CHG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG5_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.830e-33
Identity = 73/124 (58.87%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    2 CESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGSGEKRWLALELRLVADVGLVSGELAGR 125
            C   LNTL  LRG  SFVA+ G  G     NG+DG  + + VP GT+V D D G  ILGEL+  G+RL+VAKGG GGRGNA+ KVTRG APRA+ P  GE+R L LELRLVADVGLV    AG+
Sbjct:  274 CVGGLNTLGELRGVASFVADNGRNGGMCYNNGRDGTDVGVKVPAGTIVADMDTG-AILGELKSPGDRLIVAKGGEGGRGNASQKVTRGTAPRATPPSPGERRQLKLELRLVADVGLVGVPNAGK 396          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A2W4KNF7_9FIRM (GTPase ObgE (Fragment) n=2 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4KNF7_9FIRM)

HSP 1 Score: 114 bits (284), Expect = 2.250e-27
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V + +LNTL +LR    + AERG  GE    +G+ G   E+ VPPGT+VRDRD G V L +L E G+RL+VA+GG GGRGNA     R QAPR +  G  GE RWL LELRL+ADVGLV    AG+
Sbjct:   47 VVDPALNTLADLRYRRHYRAERGGNGEGSNRHGRRGRDCEVRVPPGTIVRDRDTGEV-LADLAEAGQRLVVARGGRGGRGNARFATPRRQAPRIAEKGEPGEARWLRLELRLLADVGLVGWPNAGK 171          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A3M1FP24_9CHLR (GTPase Obg n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FP24_9CHLR)

HSP 1 Score: 110 bits (276), Expect = 2.670e-26
Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V +  LNTL   +  + F AERG  G      G DG  + IPVPPGT+VRD + G  +LG+L   G++LLVA+GG GGRGNAA K  R +APR +  G  GE+RW+ LEL+L+ADVGL+    AG+
Sbjct:   47 VVDEGLNTLQPFKNQVHFRAERGQHGGGANKTGADGADLLIPVPPGTLVRDAETG-ELLGDLTRPGQKLLVARGGRGGRGNAAFKSGRNRAPRLAEKGEPGEERWIELELKLIADVGLIGAPNAGK 171          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A7C5XTA0_9GAMM (GTPase Obg n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XTA0_9GAMM)

HSP 1 Score: 108 bits (269), Expect = 1.110e-25
Identity = 66/126 (52.38%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V +  LNTL + R    F AE G  GE R   G+ G  +EI VP GTVVRD D G  ++G+L   GERLLVA+GG GG+GN   K +  +APR + PG+ GE+R LALELRL+ADVGLV    AG+
Sbjct:   48 VADPGLNTLADFRYARRFEAEDGRPGEGRERTGRSGDDLEIRVPVGTVVRDADTG-ELVGDLTRPGERLLVARGGRGGKGNVRFKSSTNRAPRQATPGTPGERRRLALELRLLADVGLVGLPNAGK 172          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A7C3FCR1_9CHLR (GTPase Obg n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3FCR1_9CHLR)

HSP 1 Score: 108 bits (270), Expect = 1.780e-25
Identity = 64/126 (50.79%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V + SLNTLV+ R  + F A+RG  G  +  +G+ G  + IPVPPGTVV D D  G +L +L   G++ LVA+GG GGRGNAA K    QAPR +  G  GE+RWL LEL+L+ADVG+V    AG+
Sbjct:   47 VVDPSLNTLVHFRQRVHFKAQRGAHGRGKNQHGRSGEDLYIPVPPGTVVYD-DETGELLADLVTPGQKALVARGGRGGRGNAAFKSPTNQAPRIAERGEPGEERWLRLELKLIADVGIVGVPNAGK 171          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A497ANC6_9CHLR (GTPase Obg n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497ANC6_9CHLR)

HSP 1 Score: 105 bits (263), Expect = 1.740e-24
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V +  LNTLVN +    F A RG  G  +   GK G  + IPVPPGTVVRD + G +I  +L E G+++LVA+GG GGRGNAA      QAPR +  G  GE+RWL LEL+L+AD G+V    AG+
Sbjct:   47 VVDPHLNTLVNFKKRSHFKAGRGQHGRGKNQTGKSGEDLYIPVPPGTVVRDAETGELIA-DLVEPGQKVLVARGGRGGRGNAAFATPTNQAPRFAEKGEPGEERWLYLELKLIADAGIVGVPNAGK 171          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: UPI0004162A7F (Obg family GTPase CgtA n=1 Tax=Thermithiobacillus tepidarius TaxID=929 RepID=UPI0004162A7F)

HSP 1 Score: 104 bits (260), Expect = 3.320e-24
Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 0
Query:    6 LNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            LNTLV+ R   +F AERG GG+ R   G+ G    I VP GTVV D D G  +LG+LRE G+RL+VA+GG+GG GN   K +  +APR + PG  GE R L LELRL+ADVGLV    AG+
Sbjct:   53 LNTLVDFRYQKNFQAERGHGGQGRQKTGRAGADKVIQVPIGTVVYDLDTG-ELLGDLREAGQRLVVARGGWGGHGNLFYKSSTNRAPRRAEPGGEGEARELRLELRLLADVGLVGLPNAGK 172          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A7R8ZXD9_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8ZXD9_9CRUS)

HSP 1 Score: 100 bits (250), Expect = 4.410e-24
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V + +LNTL++ R    F AERG  G  R   GK G  +EIPVP GT+V+D D+   ++G+L E G++LLVA+GG+ G GN   K +  +APR S  G+ GE+R + LEL+L+ADVGL+    AG+
Sbjct:   48 VADQNLNTLIDFRHARMFNAERGQNGSGRNCTGKSGDDLEIPVPVGTIVKD-DDSDELIGDLIEPGQKLLVARGGFHGLGNTRFKSSTNRAPRQSTNGTPGEERIIHLELKLLADVGLLGLPNAGK 172          
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Match: A0A7C5R0T0_9CHLR (GTPase Obg n=2 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5R0T0_9CHLR)

HSP 1 Score: 104 bits (260), Expect = 4.640e-24
Identity = 63/126 (50.00%), Postives = 81/126 (64.29%), Query Frame = 0
Query:    1 VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVRDRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGS-GEKRWLALELRLVADVGLVSGELAGR 125
            V  + L TL++ +    F AERG  G  +   G  G ++EIPVP GTVVRD D  G +L +L E G+R+LVA+GG GGRGNAA      QAPR +  G  GE+RW+ LELRL+ADVG+V    AG+
Sbjct:   47 VATAHLTTLIDFKKRSHFRAERGAHGGGKDKQGARGANLEIPVPVGTVVRDAD--GNVLADLVEVGQRVLVARGGRGGRGNAAFATPTNQAPRIAENGEPGEERWITLELRLLADVGIVGMPNAGK 170          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13587.2078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRG3_ECTSI3.310e-6483.20PObg2, plastid Obg/CgtA-like GTPase 2 n=2 Tax=Ecto... [more]
A0A836CHG5_9STRA2.830e-3358.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2W4KNF7_9FIRM2.250e-2753.97GTPase ObgE (Fragment) n=2 Tax=Firmicutes bacteriu... [more]
A0A3M1FP24_9CHLR2.670e-2650.00GTPase Obg n=1 Tax=Caldilineae bacterium TaxID=242... [more]
A0A7C5XTA0_9GAMM1.110e-2552.38GTPase Obg n=1 Tax=Chromatiales bacterium TaxID=20... [more]
A0A7C3FCR1_9CHLR1.780e-2550.79GTPase Obg n=1 Tax=Caldilineae bacterium TaxID=242... [more]
A0A497ANC6_9CHLR1.740e-2450.00GTPase Obg n=1 Tax=Chloroflexi bacterium TaxID=202... [more]
UPI0004162A7F3.320e-2453.72Obg family GTPase CgtA n=1 Tax=Thermithiobacillus ... [more]
A0A7R8ZXD9_9CRUS4.410e-2446.83Hypothetical protein (Fragment) n=1 Tax=Cyprideis ... [more]
A0A7C5R0T0_9CHLR4.640e-2450.00GTPase Obg n=2 Tax=Anaerolineae bacterium TaxID=20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006169GTP1/OBG domainPFAMPF01018GTP1_OBGcoord: 2..110
e-value: 3.4E-23
score: 82.0
IPR036726GTP1/OBG domain superfamilyGENE3D2.70.210.12coord: 1..111
e-value: 4.0E-23
score: 83.5
IPR036726GTP1/OBG domain superfamilySUPERFAMILY82051Obg GTP-binding protein N-terminal domaincoord: 2..111
NoneNo IPR availablePANTHERPTHR11702DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATEDcoord: 3..124
NoneNo IPR availablePANTHERPTHR11702:SF31GTPASE MTG2, MITOCHONDRIALcoord: 3..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13587contigS-dermatodea_contig13587:231..4356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13587.2078.1mRNA_S-dermatodea_contig13587.2078.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13587 231..4356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13587.2078.1 ID=prot_S-dermatodea_contig13587.2078.1|Name=mRNA_S-dermatodea_contig13587.2078.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=125bp
VCESSLNTLVNLRGTLSFVAERGTGGEQRLTNGKDGGSIEIPVPPGTVVR
DRDNGGVILGELREGGERLLVAKGGYGGRGNAATKVTRGQAPRASAPGSG
EKRWLALELRLVADVGLVSGELAGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006169GTP1_OBG_dom
IPR036726GTP1_OBG_dom_sf