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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 3097 |
| Cds size | 1242 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1327.1943.1 >prot_S-dermatodea_contig1327.1943.1 ID=prot_S-dermatodea_contig1327.1943.1|Name=mRNA_S-dermatodea_contig1327.1943.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=414bp
MFDGPVMIDARLLDYLSTRLASKATLADATKADTAGFPAQGERDLQAVCS
AGDPFTISSAIYPDAEGCFAEVEADSYLYANADVTWAILPVSIAIATLTS
SSSSYTTTSEIFWASALIFVDSNSDLVFDAECLSADPVRTGSHPTDVSPW
YCQLGDRFYEVTGSGFSAECGCSSDSSTGTGTGDTPAPADASAGTSGCSG
TDPFTVTSGLLSDFDGCYSDGGATDQTVFMQAVDGAGGSLAVHEAYIDQA
ETDERWLVGAYAGTNSTVEPTVDCISQEAPSEAHPADANWVCDFTGTGAY
TLASDAQFSIECGCSSSSLPSTSPASTPAPMVDASGSTEPTPSPVATEEP
APAASGDLTTSTSVPAAEPIGAGGASANGGDVRALRPSAIMMAAAALAVG
LASGSLATKWRLD* back to topmRNA from alignment at S-dermatodea_contig1327:6869..12048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1327.1943.1 ID=mRNA_S-dermatodea_contig1327.1943.1|Name=mRNA_S-dermatodea_contig1327.1943.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5180bp|location=Sequence derived from alignment at S-dermatodea_contig1327:6869..12048+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ACAGACTCTACGGCCGAGGAAAACCGACAGTCGATCGCCGGCGGGTGTTG
CTGGAGAAGACCACACTCGCCCACTGAATGCGCTGGGGCTGGAAAAAAAA
GACGGCATATCTGTAATGTTCGACGGGCCAGTTATGATCGACGCGCGACT
CCTGGACTACCTCTCGACGCGACTCGCGTCAAAAGCAACATTGGCGGATG
CGACCAAGGCCGATACCGCCGGCTTTCCAGCACAGGGAGAGCGCGATCTG
CAAGCTGTGTGCTCCGCGGGCGACCCTTTCACTATTTCATCTGCGATTTA
CCCGGATGCCGAAGGTTGCTTCGCTGAGGTGGAGGCTGATTCGTACCTTT
ACGCGAACGCCGACGTAACGTGGGCGATCCTGCCTGTCAGTATTGCCATC
GCGACTCTTACCTCATCTTCCTCTTCTTACACTACCACCTCCGAGGTAAG
CCACGCTCGTGAGTAATTCTAGGGTAGGGAGGGTGCACTATGGGCCGCTT
CGCTGCGCCAGCTGGGCCGCTTTTGGAATCGGCAAGCAAGATTTCTCTGG
CCCCAAGACCAAACGTTCAACTAGTTGTTTCCGCCAAGGATGTTGCTCTA
TGTGAGTGGCGAACGTTCATCATGGTCACCCGATAACATTCATTTACCAA
ACGTTCAATAGTTGTTTCCGGCAAGGATTTAGCTCTGTGTGAGTGGCGAA
CGGTCATCATGGTCACCCGATAACATTCATTTTGTGGGTTTTTAACTCCC
TTACGAGGTACCACTCATTCGTGCAGCCAAACGCGGATCCTATACCCGTA
GGGTGCCTCTCATCGTCGTGCTGAGTACTGCGATGACGCACATCGACGTC
GCCATGGTACTCGCGGTACCGGGCTTTGCTGGAGCGTGAAGCGTGTGTGA
ACCTGCCGTGGATACCGGAAATTAGAAGGCCCAAATTGTAGTGAGCGACG
AGTTGCAGGGTTCTGCGGTTGTGTCCTCCCCGTTAGCCTAACGGCGCCAC
AGAGTGCTGGCGTGATTCCGCTCACTGTACAACCTCGCATTTCCCTTCTT
CGTGTGTGTTCGTACCCCTTAAACGCCAGATATTCTGGGCGTCGGCACTT
ATTTTCGTCGACAGCAACAGTGACTTGGTTTTCGACGCGGAGTGCTTATC
TGCAGACCCCGTCAGAACAGGTTCCCACCCAACGGATGTCAGCCCCTGGT
ACTGTGAGTTTATCCAACTTCCCGTTCAGGTTGGTTCTGCTTGGCGATTG
TAGTACTGTGAGTTTATTCAACTTCCCGTTCAGGTTGGTTCTGCTTGGCG
ATTGTAGTTCCAGCTATTAATAATTTGTTCCGCTGGCCGGTCGGGCTAGG
ACCCATACCTTGGATGGTGCGCCGGAATGGGAAACCTAGTGACAGCGTGC
CCATTTGCCGGCGGACGTCTCGTCTCCGACATGCGCTGATAAAATTGACG
AGGATGTTTTGAGGCAATCGGTGGTTGGGCTCCGCCGCCGCTTTTACTCA
CACGTATATCGATTTTCCCTCGACCCGAGGAATCGCATCATCATGCTTGC
GGCCTTGTCCTACGCGGAGGCCCTTCTTGGCGATTCCGAGCCCGCTCTTT
TTGTGTGGGTGAGGTCACCGCCTTGTCGGCTCTTCGCGTATTCGATGTTT
TTTTCCGCTCGCGTTCGCTGTTGAGGTGGCATATTTCCGCAGCGTTTGGC
GAAGACATGTGATAGGGCGCGAATCTCTCCTGTGTGACACACACAGGTCT
GCCTACTACGGGCTGACGGTAGCGCTGTCCCTTCCCTCTGCGTACGCACT
CGTTGGCGTCCGCCATGCCTCCTACGCATCGACATTTCACTCGCATCAGG
CCAGCTCGGAGACAGATTCTACGAAGTAACCGGTAGTGGCTTCTCCGCGG
AGTGCGGCTGTTCCAGCGATTCATCGACCGGAACGGGAACGGGAGATACC
CCGGCGCCCGCCGACGCCTCCGCGGGAACGTCCGGATGCAGTGGGACCGA
CCCCTTCACTGTTACGTCTGGCTTACTCTCCGACTTTGACGGTTGCTACA
GCGATGGTGGGGCTACGGACCAGACGGTTTTCATGCAGGCCGTCGACGGG
GCTGGTGGTTCCTTGGCGGTGCACGAGGCGTATATCGACCAGGCCGAGAC
AGACGTGAGTAGATGCAGAACGTCATGAGGGCGTTATGTCCACTGAACTG
GTTCGAGGGATGTCAGCCTGTGTCGTGGTTGATCCGATGTTGGACCATGG
TCACATACACCATCAGCCCTTCGTTTTTGTCGACGACGGGGTTCTATTTT
GGCATATCTTATCATGTGGCCCAGAAGAGAGTGGCGCTCAGAGCATTAAA
TAGTTCGCAAGCGATGGTCGTCTGTTGTGGAATATTTGTGGGCCGACCTA
CTCGGCGCTCTGCCTCCCCCCATTGCGCTTGCTAGCGGCGTTTGCCGATC
GTGTTAACGTAGACCAATATGTACCATATCGTGCAACGTCTCTACCTTTA
CCTTTCGCAACGCGGGGGTGGTCCTCTCATCGCCCTCGAGCAGGAGCGGT
GGCTGGTGGGTGCATACGCTGGAACCAACTCAACGGTTGAGCCCACAGTG
GACTGCATTTCCCAGGAGGCCCCGTCCGAGGCTCACCCTGCGGACGCCAA
CTGGGTCTGTAAGTGGAATTGACTGGTGGTCACTATTTTTGGTTTAACGC
GAAGATGCCTGTTGGCTTTAACGCCGTCGCGGTTGTTCGCTTTGCTCGCG
GTTAGCTAGCGCGGAAGAGGACACACACCCGCAATTCCAACCTTGCCTAG
TTAATAGGTGGCCCGAGGAGCTGCGCCCAGAGAGGTCCATACCTTGTATG
TTTCGCAGACCCGTAAATCTCGCAACGGTCACTGGCCAAAGCGTTTGCAG
GTTGCGATGCCACGCACGTGGAGAGGGCACTGGAATGTACACCCTACGCC
CATCGCAGGTCGAACCGACTGTCACAGGCTTACCGCTAGCCTCCAGTTGT
GCGTGGCTCCCCTCCCCGAGTTCGATCCACCGCCCACCGCAATTCTCCGT
CCCCTTCTGCACCGCAACGCAGGTGACTTCACGGGCACGGGAGCGTACAC
CCTGGCGTCTGACGCTCAGTTTAGCATCGAGTGCGGGTGCAGCTCTAGCT
CCCTACCCAGCACCTCACCGGCATCCACCCCGGCACCAATGGTGGATGCC
TCGGGAAGCACGGAACCGACGCCCTCTCCTGTCGCGACCGAGGAACCGGC
TCCTGCCGCGAGTGGTGACTTGACCACGAGCACGAGCGTACCTGCCGCCG
AGCCCATTGGTGCGGGGGGTGCGAGTGCAAACGGTGGCGATGTGCGCGCT
TTGAGACCCTCGGCGATTATGATGGCGGCGGCCGCTCTGGCGGTGGGTCT
CGCCAGTGGTTCCCTGGCGACGAAATGGCGACTGGATTAGGCAACGAGCC
CCTCGTAGTGCGGAGCGAGGAGGGGCTGTCTGGTGCAGGTGCTGGCGGGA
GAGTGTACGCATGTTTAGAACGGGATGTGTTCACGGTCGATGGTTTGTAA
TAGGAGCGCTTTAGGGTTTTGGTCTGTGTTTGTTACTCCTCGTCGCGGCA
TCTATGTACGCTTGTACGCAAGCCTGGCACCATACCTTGCACAGGCTTTT
GGTCGTTTGGGTGGCTTCTTCTTCTTCCTGTCCGTTGTTTGATTTTGGCT
GTTCCCCTCTCTCTTTGGTTGACCCTGTGATTGCACCATCGAAGCCGATA
CGCGCCCGCACCGGGGCATGCTGCCTTACATTATTTAACCACCGCTTCAG
TACAGGACGATTCTTGCGAAAATTTCGAAGTATCATTGTCAGAGGTACTG
TAGAGAGCTGGGACAGGAGCAGCATTAGTAGCAGTGGTGTACTTGGAGAG
ACATCGGCCAAAAGTACCAGCAGTTTCCCTACCGTCGCATGTCAGATCCA
GCGAGCAGGTCGAAACGTGGAGTGGCCCTCATGCGCATCCATCTTGAGCG
GCGTCCTATGCAAGTTTTTCGTGGGCGGTGCGAGTTCGGTAGCGTAAGTT
TAGTCGAACGTTTTGAGGGGAAGAGAAACAGCACGGTTGCTTGCGTTCCT
CTCATTTCGCGCGCCGCGCTTGTGTGTATGAGACCGAAAACAGAGTATTT
TCCCCTTTTGTGCTGCTTCTGCTGCGGCTTCCGTGTACACGCGCTACACT
ATCCCCACCCCACGGACTTTCTTCGCTGTGGCGCTCGTTTTGGCGGCGAT
TTCGGCCGGGGGCGGTGCGTATTTTTTCATGTTTGACGTCGTACAGGGCC
CTGACAGCCATTGCTCGTGCTTGTATTGTATCATATAAATAAACTTAAAC
GGTGCTATTTTGTAGCGTATCATGGGATCTGCATAACTGTAGTGATAAAT
GATTCATGGTTGATGCATGCAGCCAGAGAAACCGTGCTTTCGTTTTTTTC
TGTGGACTGCTTGCTTTGCTGTTTGTTTCGTTACGGATGGGGGCATCCCT
CGATATTCTGAGATTCACGGAAACTGTATTCGGAGGAGAAGAAGTAATTA
TTTTCTATGATGTGCAGTGCTTGTATCGTGTACCAGGTATCATATTATTA
GCGGTTTCAGATCTTGGGTTTGGACATTTTTCCCCGCTCGGTATCCCACC
TCTGTATCGAATTTGGAGCTGTCGTATTTTGACAAAGTTCCGCCAGGCAG
TCCTTCTACAAATGACGGATATATATCCAGGAGTCCTCACAGTGACGGTA
CGGCACTGTCAGTTTGTTCTTCTCTCGACCGGCACTGGTTCGGTACGGCA
CTGTAAGATTTCCAACCGGCACTGGTACGGCCCTGTCAGATTTGTTTTTC
TCCCAAGCGGCACTGCGAGGACCCCTGAATAGATCGGCCATGTCTGACGC
CCAGAGAACCTACGGCAAGATTTTCGAAACAAACAAAGTGTACTGAGAAC
ATCGCGAACCACTGATGTTTGGCCGAATTAGTGGACCAATGGTGCTGAAT
TTTCCCGGCGACTTTCACCAAGAGCCCACAGCGACACTGCAATAATAGTA
TTTGATTACGTAGTGTACGCGGGACAGTACGTTTTTCATCTATGATGTGC
ATTCTACTGCCTCTCCGCAGTATTTACATGAATGATGATTGGGTCAAGGT
CTTGACCCAGTTCTAATCAAAACTGACGGC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1327:6869..12048+ >mRNA_S-dermatodea_contig1327.1943.1 ID=mRNA_S-dermatodea_contig1327.1943.1|Name=mRNA_S-dermatodea_contig1327.1943.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2484bp|location=Sequence derived from alignment at S-dermatodea_contig1327:6869..12048+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTCGACGGGCCAGTTATGATCGACGCGCGACTCCTGGACTACCTCTC
GACGCGACTCGCGTCAAAAGCAACATTGGCGGATGCGACCAAGGCCGATA
CCGCCGGCTTTCCAGCACAGGGAGAGCGCGATCTGCAAGCTGTGTGCTCC
GCGGGCGACCCTTTCACTATTTCATCTGCGATTTACCCGGATGCCGAAGG
TTGCTTCGCTGAGGTGGAGGCTGATTCGTACCTTTACGCGAACGCCGACG
TAACGTGGGCGATCCTGCCTGTCAGTATTGCCATCGCGACTCTTACCTCA
TCTTCCTCTTCTTACACTACCACCTCCGAGATGTTCGACGGGCCAGTTAT
GATCGACGCGCGACTCCTGGACTACCTCTCGACGCGACTCGCGTCAAAAG
CAACATTGGCGGATGCGACCAAGGCCGATACCGCCGGCTTTCCAGCACAG
GGAGAGCGCGATCTGCAAGCTGTGTGCTCCGCGGGCGACCCTTTCACTAT
TTCATCTGCGATTTACCCGGATGCCGAAGGTTGCTTCGCTGAGGTGGAGG
CTGATTCGTACCTTTACGCGAACGCCGACGTAACGTGGGCGATCCTGCCT
GTCAGTATTGCCATCGCGACTCTTACCTCATCTTCCTCTTCTTACACTAC
CACCTCCGAGATATTCTGGGCGTCGGCACTTATTTTCGTCGACAGCAACA
GTGACTTGGTTTTCGACGCGGAGTGCTTATCTGCAGACCCCGTCAGAACA
GGTTCCCACCCAACGGATGTCAGCCCCTGGTACTATATTCTGGGCGTCGG
CACTTATTTTCGTCGACAGCAACAGTGACTTGGTTTTCGACGCGGAGTGC
TTATCTGCAGACCCCGTCAGAACAGGTTCCCACCCAACGGATGTCAGCCC
CTGGTACTGCCAGCTCGGAGACAGATTCTACGAAGTAACCGGTAGTGGCT
TCTCCGCGGAGTGCGGCTGTTCCAGCGATTCATCGACCGGAACGGGAACG
GGAGATACCCCGGCGCCCGCCGACGCCTCCGCGGGAACGTCCGGATGCAG
TGGGACCGACCCCTTCACTGTTACGTCTGGCTTACTCTCCGACTTTGACG
GTTGCTACAGCGATGGTGGGGCTACGGACCAGACGGTTTTCATGCAGGCC
GTCGACGGGGCTGGTGGTTCCTTGGCGGTGCACGAGGCGTATATCGACCA
GGCCGAGACAGACGCCAGCTCGGAGACAGATTCTACGAAGTAACCGGTAG
TGGCTTCTCCGCGGAGTGCGGCTGTTCCAGCGATTCATCGACCGGAACGG
GAACGGGAGATACCCCGGCGCCCGCCGACGCCTCCGCGGGAACGTCCGGA
TGCAGTGGGACCGACCCCTTCACTGTTACGTCTGGCTTACTCTCCGACTT
TGACGGTTGCTACAGCGATGGTGGGGCTACGGACCAGACGGTTTTCATGC
AGGCCGTCGACGGGGCTGGTGGTTCCTTGGCGGTGCACGAGGCGTATATC
GACCAGGCCGAGACAGACGAGCGGTGGCTGGTGGGTGCATACGCTGGAAC
CAACTCAACGGTTGAGCCCACAGTGGACTGCATTTCCCAGGAGGCCCCGT
CCGAGGCTCACCCTGCGGACGCCAACTGGGTCTGAGCGGTGGCTGGTGGG
TGCATACGCTGGAACCAACTCAACGGTTGAGCCCACAGTGGACTGCATTT
CCCAGGAGGCCCCGTCCGAGGCTCACCCTGCGGACGCCAACTGGGTCTGT
GACTTCACGGGCACGGGAGCGTACACCCTGGCGTCTGACGCTCAGTTTAG
CATCGAGTGCGGGTGCAGCTCTAGCTCCCTACCCAGCACCTCACCGGCAT
CCACCCCGGCACCAATGGTGGATGCCTCGGGAAGCACGGAACCGACGCCC
TCTCCTGTCGCGACCGAGGAACCGGCTCCTGCCGCGAGTGGTGACTTGAC
CACGAGCACGAGCGTACCTGCCGCCGAGCCCATTGGTGCGGGGGGTGCGA
GTGCAAACGGTGGCGATGTGCGCGCTTTGAGACCCTCGGCGATTATGATG
GCGGCGGCCGCTCTGGCGGTGGGTCTCGCCAGTGGTTCCCTGGCGACGAA
ATGGCGACTGGATTAGGTGACTTCACGGGCACGGGAGCGTACACCCTGGC
GTCTGACGCTCAGTTTAGCATCGAGTGCGGGTGCAGCTCTAGCTCCCTAC
CCAGCACCTCACCGGCATCCACCCCGGCACCAATGGTGGATGCCTCGGGA
AGCACGGAACCGACGCCCTCTCCTGTCGCGACCGAGGAACCGGCTCCTGC
CGCGAGTGGTGACTTGACCACGAGCACGAGCGTACCTGCCGCCGAGCCCA
TTGGTGCGGGGGGTGCGAGTGCAAACGGTGGCGATGTGCGCGCTTTGAGA
CCCTCGGCGATTATGATGGCGGCGGCCGCTCTGGCGGTGGGTCTCGCCAG
TGGTTCCCTGGCGACGAAATGGCGACTGGATTAG back to top
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