mRNA_S-dermatodea_contig13233.1926.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13233.1926.1
Unique NamemRNA_S-dermatodea_contig13233.1926.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: D7FT09_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT09_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 3.950e-31
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            PTGHVTSLAVLPG+RRCG A QL+  LH++ +       VSLHVRKSN GAIRLYEE  GY+V GVA +YYSDGEDAF+M+A+L
Sbjct:  135 PTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 218          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: A0A6H5KNJ0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ0_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 4.460e-30
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            PTGHVTSLAVLPG+RRCG A QL+  LH++ +       VSLHVRKSN GAIRLYEE  GY+V GVA +YYSDGEDAF+M+A+L
Sbjct:  133 PTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYRANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 216          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: A0A7S2HE16_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE16_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.750e-18
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 1
Query:    7 GHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            GH+TSLAV+P +RR G+A Q++  +H Q          SLHVR +N GA+RLY+   GY  + V   YYSDGEDAFLM A L
Sbjct:  123 GHITSLAVMPDFRRLGLAQQMMEKVHSQMRLHYSADKSSLHVRITNEGAVRLYQNSLGYETMQVIGNYYSDGEDAFLMTASL 204          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: M7NPU0_PNEMU (N-acetyltransferase domain-containing protein n=2 Tax=Pneumocystis TaxID=4753 RepID=M7NPU0_PNEMU)

HSP 1 Score: 82.4 bits (202), Expect = 1.220e-17
Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 1
Query:    7 GHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            GH+TSL+VL  YRR G+A QL+             + VSLHVRK+N  A++LY     + VVGV   YY+DGEDAFLM+ DL
Sbjct:   70 GHITSLSVLRNYRRLGIAAQLMRQSQQAMVDNFQAKYVSLHVRKTNRAALKLYRNNLNFVVVGVEKEYYADGEDAFLMRCDL 151          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: UPI0013867FDF (N-alpha-acetyltransferase 11 n=1 Tax=Mustela erminea TaxID=36723 RepID=UPI0013867FDF)

HSP 1 Score: 81.6 bits (200), Expect = 1.340e-17
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVC----MRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            P GH+TSLAV   +RR G+A +L+    DQAS  +      R VSLHVR+SN  A+RLY +  G+RV  V P YY+DGEDAF M+ DL
Sbjct:   68 PHGHITSLAVKRSHRRLGLAQKLM----DQASRAMVETFGARYVSLHVRRSNRAALRLYADTLGFRVSEVEPRYYADGEDAFAMRRDL 151          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: B8CB65_THAPS (N-acetyltransferase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB65_THAPS)

HSP 1 Score: 79.7 bits (195), Expect = 3.770e-17
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQAD 249
            P GHVTSLAV    RR G+A  L+  LH   +       V LHVR SN+ A++LY E  GY V  + P YY DGEDA+ M+ D
Sbjct:   60 PLGHVTSLAVHSHARRLGIASSLLHQLHFHLNSCYNANSVGLHVRISNSAAVKLYIEHLGYDVADIIPMYYGDGEDAYFMRKD 142          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: A0A0C3AMU4_9AGAM (N-acetyltransferase domain-containing protein n=2 Tax=Serendipita TaxID=358905 RepID=A0A0C3AMU4_9AGAM)

HSP 1 Score: 80.1 bits (196), Expect = 4.470e-17
Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQAD 249
            P GHVTS++VL GYRR GVA +L+       S       VSLHVRKSN  AI LY +  G+ V  +   YY+DGEDAF M+ D
Sbjct:   68 PHGHVTSISVLRGYRRLGVAKRLMVLSQQAMSEVYRAEYVSLHVRKSNRAAIGLYRDTLGFSVHQIEKGYYADGEDAFAMRLD 150          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: A0A4S4L1B3_9AGAM (N-acetyltransferase domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L1B3_9AGAM)

HSP 1 Score: 79.0 bits (193), Expect = 1.080e-16
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            P GHVTS++VL GYRR G+A +L+    +  +       VSLHVRKSN  AI LY +  G+   GV   YY+DGEDA+ M+  L
Sbjct:   74 PHGHVTSISVLRGYRRLGIAKKLMLQSQEAMASIYKASYVSLHVRKSNRAAIGLYRDTLGFAEDGVEKKYYADGEDAYAMRLSL 157          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: A0A6J2L8W0_9CHIR (N-terminal amino-acid N(alpha)-acetyltransferase NatA n=5 Tax=Phyllostomidae TaxID=9415 RepID=A0A6J2L8W0_9CHIR)

HSP 1 Score: 80.5 bits (197), Expect = 1.080e-16
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVC----MRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            P GH+TSLAV   +RR G+A +L+    DQAS  +      + VSLHVRKSN  A+RLY E   +RV  V P YY+DGEDA+ M+ DL
Sbjct:   68 PHGHITSLAVKRSHRRLGLAQKLV----DQASRAMIENFSAKYVSLHVRKSNRAALRLYSETLNFRVSEVEPKYYADGEDAYAMKRDL 151          
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Match: UPI001D1A23F2 (N-alpha-acetyltransferase 11 n=1 Tax=Mustela putorius furo TaxID=9669 RepID=UPI001D1A23F2)

HSP 1 Score: 80.9 bits (198), Expect = 1.650e-16
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1
Query:    1 PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVC----MRVVSLHVRKSNTGAIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL 252
            P GH+TSLAV   +RR G+A +L+    DQA+  +      R VSLHVR+SN  A+RLY +  G+RV  V P YY+DGEDAF M+ DL
Sbjct:   68 PHGHITSLAVKRSHRRLGLAQKLM----DQAARAMVETFGARYVSLHVRRSNRAALRLYADALGFRVSDVEPRYYADGEDAFAMRRDL 151          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13233.1926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT09_ECTSI3.950e-3167.86N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6H5KNJ0_9PHAE4.460e-3067.86N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2HE16_9STRA1.750e-1851.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
M7NPU0_PNEMU1.220e-1750.00N-acetyltransferase domain-containing protein n=2 ... [more]
UPI0013867FDF1.340e-1752.27N-alpha-acetyltransferase 11 n=1 Tax=Mustela ermin... [more]
B8CB65_THAPS3.770e-1748.19N-acetyltransferase domain-containing protein (Fra... [more]
A0A0C3AMU4_9AGAM4.470e-1750.60N-acetyltransferase domain-containing protein n=2 ... [more]
A0A4S4L1B3_9AGAM1.080e-1647.62N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6J2L8W0_9CHIR1.080e-1651.14N-terminal amino-acid N(alpha)-acetyltransferase N... [more]
UPI001D1A23F21.650e-1651.14N-alpha-acetyltransferase 11 n=1 Tax=Mustela putor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13233contigS-dermatodea_contig13233:4870..5695 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.4
Seed ortholog evalue8.1e-25
Seed eggNOG ortholog2880.D7FT09
Preferred namenaa10
KEGG koko:K00670,ko:K20791
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0012505,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048471,GO:0070013
EggNOG free text desc.N-terminal peptidyl-glutamic acid acetylation
EggNOG OGsCOG0456@1,KOG3235@2759
EC2.3.1.255,2.3.1.256
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-24_004370.1
Exons2
Model size252
Cds size252
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924279.1300044-CDS-S-dermatodea_contig13233:4869..49851622924279.1300044-CDS-S-dermatodea_contig13233:4869..4985Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13233 4870..4985 +
1694079146.3273346-CDS-S-dermatodea_contig13233:4869..49851694079146.3273346-CDS-S-dermatodea_contig13233:4869..4985Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13233 4870..4985 +
1622924279.1427858-CDS-S-dermatodea_contig13233:5559..56951622924279.1427858-CDS-S-dermatodea_contig13233:5559..5695Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13233 5560..5695 +
1694079146.3450766-CDS-S-dermatodea_contig13233:5559..56951694079146.3450766-CDS-S-dermatodea_contig13233:5559..5695Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13233 5560..5695 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13233.1926.1prot_S-dermatodea_contig13233.1926.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13233 4870..5695 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13233.1926.1

>prot_S-dermatodea_contig13233.1926.1 ID=prot_S-dermatodea_contig13233.1926.1|Name=mRNA_S-dermatodea_contig13233.1926.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=84bp
PTGHVTSLAVLPGYRRCGVAGQLISTLHDQASGFVCMRVVSLHVRKSNTG
AIRLYEEQQGYRVVGVAPAYYSDGEDAFLMQADL
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mRNA from alignment at S-dermatodea_contig13233:4870..5695+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13233.1926.1 ID=mRNA_S-dermatodea_contig13233.1926.1|Name=mRNA_S-dermatodea_contig13233.1926.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=826bp|location=Sequence derived from alignment at S-dermatodea_contig13233:4870..5695+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCACGGGACACGTGACATCTCTAGCAGTGTTGCCCGGCTATAGGCGTTG CGGCGTGGCGGGCCAGCTAATATCTACTCTCCACGACCAGGCAAGTGGGT TTGTGTGTATGCGTGTGTATGCGTGTGTGTGCGTGGGGCGGGGGGAGGGG GGGGGCACCCACGAACTATTGCAGCCTACAATAGCAGGGAACGCACCTTC CAAATCTCCGCGTGTCATGAGTCTCACCATGGAATTAATCCACGCTGGGA GGGACCCCGTTACAGTTGCTACGAAAAGAGGGCTTGTACGTTGGTGTCTC ATTCGAACACTAGTCGTTGTAGGGAGGGGTTATCGCAAGCAGCCGGTCCG CTGCAAATCCAGCCGCTCTATCGGCGGTGAACATGGGAGCCAAGAACACA GAATACTTAACACACACGCAATACCGGGTTTCTCGGTTAGGTTACAGCAC TCCTCGCCGGGGGGCTGGCCCTACCGGAGCGCAGGGGGGCAGCACTCATG CACTGCTTCAGAACAAGCAAATACGTTCTCGTTGTTGGTGTGGGTGAGGA ACCGCTTTGACGATGCCGCAATGGCTGCCCGGATACGCGATTTCTCCCAA AGCAAGGGTCCAACCGGTTAGGCGACCGCTGCCTCCCCGTACACCCCACC CCGTCTTGCCGCAGATGCACGCTCATTACTGCGCCGCCAGGGTGTCGCTG CACGTCCGGAAGTCAAACACGGGTGCTATTCGGCTGTACGAGGAGCAGCA AGGCTACAGAGTCGTTGGCGTCGCGCCGGCGTACTATTCCGACGGAGAAG ACGCCTTCCTGATGCAGGCGGACCTT
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Coding sequence (CDS) from alignment at S-dermatodea_contig13233:4870..5695+

>mRNA_S-dermatodea_contig13233.1926.1 ID=mRNA_S-dermatodea_contig13233.1926.1|Name=mRNA_S-dermatodea_contig13233.1926.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=504bp|location=Sequence derived from alignment at S-dermatodea_contig13233:4870..5695+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCCACGGGACACGTGACATCTCTAGCAGTGTTGCCCGGCTATAGGCGTTG
CGGCGTGGCGGGCCAGCTAATATCTACTCTCCACGACCAGGCAAGTGGGT
TTGTGTGTATGCGTGTCCCACGGGACACGTGACATCTCTAGCAGTGTTGC
CCGGCTATAGGCGTTGCGGCGTGGCGGGCCAGCTAATATCTACTCTCCAC
GACCAGGCAAGTGGGTTTGTGTGTATGCGTGTGGTGTCGCTGCACGTCCG
GAAGTCAAACACGGGTGCTATTCGGCTGTACGAGGAGCAGCAAGGCTACA
GAGTCGTTGGCGTCGCGCCGGCGTACTATTCCGACGGAGAAGACGCCTTC
CTGATGCAGGCGGACCTTGGTGTCGCTGCACGTCCGGAAGTCAAACACGG
GTGCTATTCGGCTGTACGAGGAGCAGCAAGGCTACAGAGTCGTTGGCGTC
GCGCCGGCGTACTATTCCGACGGAGAAGACGCCTTCCTGATGCAGGCGGA
CCTT
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