mRNA_S-dermatodea_contig13156.1887.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: D7FTF2_ECTSI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF2_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 2.760e-15 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 7 NGQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTIDG 174
N +G++M P W+C AS+LP LG+V VSCEGY+ DDPYVL GSCA+ YT+ G
Sbjct: 57 NEGIGENMMPSWSCTASSLPKDTELGSVNVSCEGYTYGDDPYVLAGSCAMEYTLTG 112
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: D7FTI2_ECTSI (Store-operated calcium entry-associated regulatory factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTI2_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.090e-12 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 4 RNGQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTID 171
+N GDD QP+W C A LP LG V VSCEG+ + DPYVLVGSC+LTY++D
Sbjct: 64 KNQGTGDDGQPQWECSAD-LPADGALGAVTVSCEGFDSPSDPYVLVGSCSLTYSLD 118
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: A0A0L0VR78_9BASI (Store-operated calcium entry-associated regulatory factor n=3 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0VR78_9BASI) HSP 1 Score: 67.0 bits (162), Expect = 1.220e-11 Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 10 GQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTI 168
G G D+ W C+A LP ++ LG VEV CEG+SN DDPYVL GSCALTYT+
Sbjct: 55 GGSGTDIN--WKCDAD-LPSTLKLGRVEVGCEGWSNADDPYVLKGSCALTYTL 104
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: A0A316UEM1_9BASI (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UEM1_9BASI) HSP 1 Score: 63.5 bits (153), Expect = 1.530e-11 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 16 MGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTI 168
+GD+ +W CEA LP S+ +G VEVSCEGY +DPYVL GSCALTY +
Sbjct: 49 LGDE---QWRCEAD-LPPSIRMGRVEVSCEGYEAPNDPYVLKGSCALTYQL 95
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: E3L1M0_PUCGT (Store-operated calcium entry-associated regulatory factor n=3 Tax=Puccinia graminis f. sp. tritici TaxID=56615 RepID=E3L1M0_PUCGT) HSP 1 Score: 66.2 bits (160), Expect = 1.890e-11 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 10 GQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTID 171
G +G D+ W CEA LP + LG VEV CEG+SN DPYVL GSCALTYT++
Sbjct: 55 GGLGTDVN--WKCEAD-LPAKLKLGRVEVGCEGWSNSQDPYVLKGSCALTYTLN 105
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: F4R3I2_MELLP (Store-operated calcium entry-associated regulatory factor n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R3I2_MELLP) HSP 1 Score: 66.2 bits (160), Expect = 2.090e-11 Identity = 29/50 (58.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 19 GDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTI 168
G W CEA LP S+ LG EVSCEG+ N DDPY+L GSC LTYT+
Sbjct: 56 GSGSNIHWKCEAD-LPSSIKLGRTEVSCEGFRNADDPYILEGSCGLTYTL 104
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: A0A0P4WFS8_SCYOL (Store-operated calcium entry-associated regulatory factor n=2 Tax=Portunidae TaxID=6757 RepID=A0A0P4WFS8_SCYOL) HSP 1 Score: 66.2 bits (160), Expect = 2.400e-11 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 10 GQMGDDMQPRWACEASTLPDSVY-LGTVEVSCEGYSNRDDPYVLVGSCALTYTIDGTPSG 186
G G+D+Q W C+ T D+ Y G++EVSCEGY +RDDPYVL GSC L YTID T G
Sbjct: 85 GWDGEDVQ--WECK--TDMDNAYRFGSIEVSCEGYEHRDDPYVLKGSCGLRYTIDYTKEG 140
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: A0A0L6V1C1_9BASI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6V1C1_9BASI) HSP 1 Score: 65.5 bits (158), Expect = 4.750e-11 Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 10 GQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTI--------DGTPSG 186
G G D+ W CEA LP + LG VEV CEG+SN DPY+L GSCALTYT+ D +P G
Sbjct: 54 GGSGTDIN--WKCEAD-LPSKLKLGRVEVGCEGWSNSQDPYILKGSCALTYTLKVDSSSSYDASPDG 117
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: A0A177UGM2_9BASI (Store-operated calcium entry-associated regulatory factor n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UGM2_9BASI) HSP 1 Score: 65.5 bits (158), Expect = 5.410e-11 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 IRNGQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTI 168
++ MGD +W CEA LP+++ LG VEVSCEG+ N DDPYVL GSC LTY +
Sbjct: 81 VQCSSMGDW---QWKCEAE-LPEALRLGKVEVSCEGWENADDPYVLSGSCGLTYNL 132
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Match: A0A5B0PCK3_PUCGR (Store-operated calcium entry-associated regulatory factor n=2 Tax=Puccinia graminis f. sp. tritici TaxID=56615 RepID=A0A5B0PCK3_PUCGR) HSP 1 Score: 65.1 bits (157), Expect = 6.880e-11 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 10 GQMGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTI 168
G G D+ W CEA LP + LG VEV CEG+SN +DPYVL GSCALTYT+
Sbjct: 55 GGSGTDVN--WKCEAD-LPAKLKLGRVEVGCEGWSNANDPYVLKGSCALTYTL 104 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13156.1887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13156.1887.1 >prot_S-dermatodea_contig13156.1887.1 ID=prot_S-dermatodea_contig13156.1887.1|Name=mRNA_S-dermatodea_contig13156.1887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=58bp MGDDMQPRWACEASTLPDSVYLGTVEVSCEGYSNRDDPYVLVGSCALTYTback to top mRNA from alignment at S-dermatodea_contig13156:865..1053+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13156.1887.1 ID=mRNA_S-dermatodea_contig13156.1887.1|Name=mRNA_S-dermatodea_contig13156.1887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at S-dermatodea_contig13156:865..1053+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13156:865..1053+ >mRNA_S-dermatodea_contig13156.1887.1 ID=mRNA_S-dermatodea_contig13156.1887.1|Name=mRNA_S-dermatodea_contig13156.1887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at S-dermatodea_contig13156:865..1053+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |