prot_S-dermatodea_contig13136.1880.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13136.1880.1
Unique Nameprot_S-dermatodea_contig13136.1880.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length173
Homology
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.840e-38
Identity = 141/180 (78.33%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    1 VEADSTVHLVRSQARPAPSTPPAGSPAAAAGAAGANP-------FGVAGAXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT 173
            VEADSTVHLVRSQAR APS P AG      GAAG NP       FG       XXX             GGGMDINRMQQQLMSNPEMMANI  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT
Sbjct:   65 VEADSTVHLVRSQARAAPSMPAAG------GAAGTNPSPSATNPFGGTPPGGAXXXGANPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT 238          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A6H5KF83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF83_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.890e-21
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0
Query:  128 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT 173
            PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT
Sbjct:   14 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT 59          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.890e-15
Identity = 65/111 (58.56%), Postives = 72/111 (64.86%), Query Frame = 0
Query:   63 GGGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT 173
            GGG DI+RMQQQL+SNPEMMANI                      XXXXXXXXXXXXXXXX    PA +RQ L+M RNP AM +A RSQD  MS +E  P GFNALRR+YT
Sbjct:  130 GGGADISRMQQQLLSNPEMMANIMNSPMMQGLLNDPETLRSMVTGXXXXXXXXXXXXXXXXVFNDPAVIRQSLEMMRNPAAMREAMRSQDRAMSNLETHPEGFNALRRMYT 240          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A7S2ML96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ML96_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.710e-11
Identity = 99/170 (58.24%), Postives = 113/170 (66.47%), Query Frame = 0
Query:    6 TVHLVRSQARPAPS-TPPAGSPAAAAGAAGANPF-GVAGAXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYT 173
            TVHLVRS     PS TP   +P+  +  +GANP   + G+                    G  DINRMQQQL+ NPE     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P+ MRQ +DM RNP AM +  R+QDL +SQ+EN P GFNALRR+YT
Sbjct:   75 TVHLVRSSRTQNPSDTPQTHTPSFQSMGSGANPPPSMPGSGMNSGAANPYAAMMNMQQ--GPPDINRMQQQLLQNPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDPSLMRQTMDMIRNPAAMREMMRTQDLAISQLENHPEGFNALRRMYT 242          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A7S2W3L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3L9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.060e-10
Identity = 56/109 (51.38%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   64 GGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 172
            GGM +  MQ++LM NPE++  +              XXX    XXXXXXXXXXXXXX       PA MRQ ++  RNP AM +  RSQDL MSQ+EN P GFNALRR+Y
Sbjct:  126 GGMGVQGMQERLMRNPELLEQVWSSPMMQQLLNNPDXXXSMLEXXXXXXXXXXXXXXLSHILNDPAVMRQTMEAMRNPSAMREMMRSQDLAMSQLENHPEGFNALRRMY 234          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A6U3QPU3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QPU3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.740e-9
Identity = 106/188 (56.38%), Postives = 127/188 (67.55%), Query Frame = 0
Query:    6 TVHLVRSQAR--------------PAPSTP-------PAGSPAAAAGAAGANPFGVAGAXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 172
            T+HLV+  A+              P+PSTP        +G+   ++G AG+NPF                XXXXXXXX G  D+N+MQQQL+ NPEMM++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MR+ ++M R+P AM    R+QDL MSQIEN PGGF+ALRR+Y
Sbjct:   79 TLHLVKGSAQNRSGGQSGASAAPVPSPSTPFSAGVSTDSGTGLGSSGTAGSNPF----------LAMQQMXXXXXXXXXGMPDMNQMQQQLLQNPEMMSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMRRSMEMMRDPSAMQNMMRNQDLAMSQIENVPGGFSALRRMY 256          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A3Q7FI77_SOLLC (Uncharacterized protein n=4 Tax=Solanum TaxID=4107 RepID=A0A3Q7FI77_SOLLC)

HSP 1 Score: 64.7 bits (156), Expect = 5.020e-9
Identity = 83/185 (44.86%), Postives = 100/185 (54.05%), Query Frame = 0
Query:    1 VEADSTVHLVRSQARPAPSTPPA------------GSPAAAAGAAGANPFGVAGAXXXXXXXXXXXXXXXXXXXGGGM-DINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 172
            +EAD TVHLVR  A PAPS  PA             +P +AA  AG  PF   G+                   G G+ D  ++QQQL  NP+MM ++               XXXXXXXXXXXXXXXXXXXXXXX    PAT+RQ ++ ARNPE M +  R+ D  MS IE+ P GFN LRR+Y
Sbjct:   90 LEADHTVHLVRGSA-PAPSANPACAPNVGGPNTAQNAPRSAASDAG-GPF--PGSGLGASMFPGLGSGGGGGLFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLVQNLMNNPETXXXXXXXXXXXXXXXXXXXXXXXVLNDPATLRQTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMY 270          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: I2CQX3_NANGC (Ubiquilin n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX3_NANGC)

HSP 1 Score: 62.4 bits (150), Expect = 2.950e-8
Identity = 79/103 (76.70%), Postives = 83/103 (80.58%), Query Frame = 0
Query:   70 RMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 172
            RMQQQLM NPEM    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   PA +RQ ++ ARNP A  Q  RS DL MSQIEN P GFNALRR+Y
Sbjct:   20 RMQQQLMQNPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDPAMLRQAMETARNPAAREQMMRSNDLAMSQIENHPEGFNALRRMY 122          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A2G3CKR2_CAPCH (Ubiquitin domain-containing protein DSK2a n=2 Tax=Capsicum TaxID=4071 RepID=A0A2G3CKR2_CAPCH)

HSP 1 Score: 62.4 bits (150), Expect = 3.170e-8
Identity = 83/184 (45.11%), Postives = 99/184 (53.80%), Query Frame = 0
Query:    1 VEADSTVHLVRSQARPAPSTPPA-----GSPAAAAGA-------AGANPFGVAGAXXXXXXXXXXXXXXXXXXXGGGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 172
            +EAD TVHLVR  A PAPS  PA     G P  A  A       AGA PF   G+                    G +D  ++QQQL  NP++M ++                XXXXXXXXXXXXXXXXXXXXXXX   PAT+RQ ++ ARNPE M +  R+ D  MS IE+ P GFN LRR+Y
Sbjct:  103 LEADHTVHLVRGFA-PAPSANPASAINAGGPTTAQNAPRDATPDAGA-PF--PGSGLGASTFPGLGSGGGGLFGAGLLDFEQVQQQLTQNPDLMRDMMNMPLFQNFMNNPETIXXXXXXXXXXXXXXXXXXXXXXXLNDPATLRQTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMY 282          
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Match: A0A7S3VGM9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM9_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.940e-8
Identity = 79/109 (72.48%), Postives = 88/109 (80.73%), Query Frame = 0
Query:   64 GGMDINRMQQQLMSNPEMMANIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY 172
            G MD++ MQ QLM NP      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P  MR+ ++M R+P AM  A R+QDL +SQIEN PGGFNALRR+Y
Sbjct:  138 GNMDMSEMQNQLMQNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPEMMRRSMEMMRDPSAMQNAMRNQDLALSQIENIPGGFNALRRMY 246          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13136.1880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR67_ECTSI1.840e-3878.33Ubiquitin family protein, expressed n=1 Tax=Ectoca... [more]
A0A6H5KF83_9PHAE2.890e-21100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7M7_9STRA1.890e-1558.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2ML96_9STRA8.710e-1158.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2W3L9_9STRA3.060e-1051.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U3QPU3_9STRA3.740e-956.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A3Q7FI77_SOLLC5.020e-944.86Uncharacterized protein n=4 Tax=Solanum TaxID=4107... [more]
I2CQX3_NANGC2.950e-876.70Ubiquilin n=1 Tax=Nannochloropsis gaditana (strain... [more]
A0A2G3CKR2_CAPCH3.170e-845.11Ubiquitin domain-containing protein DSK2a n=2 Tax=... [more]
A0A7S3VGM9_9STRA5.940e-872.48Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 78..106
e-value: 6.8
score: 10.3
coord: 108..147
e-value: 5.7E-7
score: 39.2
NoneNo IPR availableGENE3D1.10.260.100coord: 103..160
e-value: 2.0E-6
score: 29.8
IPR015496UbiquilinPANTHERPTHR10677UBIQUILINcoord: 1..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13136contigS-dermatodea_contig13136:203..5630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13136.1880.1mRNA_S-dermatodea_contig13136.1880.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13136 203..5630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13136.1880.1 ID=prot_S-dermatodea_contig13136.1880.1|Name=mRNA_S-dermatodea_contig13136.1880.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp
VEADSTVHLVRSQARPAPSTPPAGSPAAAAGAAGANPFGVAGAGAGGAAG
ANPLAEMMGGMGGGGMDINRMQQQLMSNPEMMANIMNSPMMEGLLNNPEM
LRSIMFSNPQMQQVMQNNPQLAQVLNDPATMRQYLDMARNPEAMNQARRS
QDLMMSQIENQPGGFNALRRLYT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006636STI1_HS-bd
IPR015496Ubiquilin