prot_S-dermatodea_contig13110.1865.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13110.1865.1
Unique Nameprot_S-dermatodea_contig13110.1865.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length605
Homology
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BLAST of mRNA_S-dermatodea_contig13110.1865.1 vs. uniprot
Match: A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.180e-18
Identity = 60/117 (51.28%), Postives = 75/117 (64.10%), Query Frame = 0 
Query:  451 VEAGVEEPHGVNGI---------GEAAVVPDDADGGDGYRGDAAYARLLIAEHLELYFRQQVFNGV-PYLSYSKAQ--------LQPALHAHRELSRTRPDK-VAAVFRETALPCLP 548
            VE G+EE  G  G+         G ++VV +DA    GYRGD AYA LL+AEHLELYFRQQVF+G  PYL Y + +        L  A+H HRE S+TR +K + A+FRETALPC+P
Sbjct: 1192 VEEGIEEEVGCGGVNGEVERDNRGSSSVVDEDAGHDGGYRGDEAYAELLVAEHLELYFRQQVFSGAAPYLLYDEERDGGQQPKDLPRAMHRHREASKTRQEKKLVAMFRETALPCVP 1308
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BLAST of mRNA_S-dermatodea_contig13110.1865.1 vs. uniprot
Match: D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.760e-16
Identity = 56/106 (52.83%), Postives = 70/106 (66.04%), Query Frame = 0 
Query:  460 GVNGI------GEAAVVPDDADGGDGYRGDAAYARLLIAEHLELYFRQQVFNGV-PYLSYSKAQ---------LQPALHAHRELSRTRPDK-VAAVFRETALPCLP 548
            GVNG       G ++V  +DA+   GYRGD AYA LL+AEHLELYFRQQVF+G  PYL Y + +         L  A+H HRE S+TR +K + A+FRETALPC+P
Sbjct: 1252 GVNGEEERGTRGSSSVEDEDAEHDCGYRGDEAYAELLVAEHLELYFRQQVFSGAAPYLLYDEERDGGGQQPEDLPRAMHRHREASKTRQEKKLVAMFRETALPCVP 1357
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13110.1865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K372_9PHAE1.180e-1851.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMA8_ECTSI1.760e-1652.83Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13110contigS-dermatodea_contig13110:3091..6354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13110.1865.1mRNA_S-dermatodea_contig13110.1865.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13110 3091..6354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13110.1865.1 ID=prot_S-dermatodea_contig13110.1865.1|Name=mRNA_S-dermatodea_contig13110.1865.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=605bp
SVPPTGVTAAAPDDGSVAPPTPLRRSTDATRERYGGRRRRGTRAVVIEEP
GSPRATLALASGLGGELVPDLRQQSLSFCTVPLPTEDTEHRPRSEHAENE
GGGRIKHSRGERNPEIVPEAEEKETPAEGFHARRRSLSLVGEADGDETKI
VKIQGIRPADLDRIEGIPASPEKPPERPREFVDTPPLPALLLRDPHIDYD
RERAPLVQPLPFLIRARTSDEVRSDVDSPKSGAGDGDVVAVDDFDEKLPP
DAPLGVIPGRLVSAPVAASPAKGHVSSDSGGARVDPIQPPQSPLTREDSG
IQRKTGARQEGPPPDDGCGKPGSRGGPNVGVAPGDVREIALGVFSTSEKK
ENGMLDSRGLGGYPRDRLAAGLSRSAVDAPATREHDSVASDPETEQEQRP
EARAGAAEAPDSAEPITVIVPAEGATKEPADGAEIDSSGSVARPSSTSVT
VEAGVEEPHGVNGIGEAAVVPDDADGGDGYRGDAAYARLLIAEHLELYFR
QQVFNGVPYLSYSKAQLQPALHAHRELSRTRPDKVAAVFRETALPCLPDL
PWGSVSPVSPGPTGGSSGSNMSDNRRRGVLGGSSRRRAAEELAAAGMAQT
VRRRG
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