mRNA_S-dermatodea_contig13067.1844.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13067.1844.1
Unique NamemRNA_S-dermatodea_contig13067.1844.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: D7FKK0_ECTSI (PIH1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK0_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.890e-92
Identity = 134/182 (73.63%), Postives = 156/182 (85.71%), Query Frame = 1 
Query:    1 RAYYLFPQEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSKASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQ 546
            R + + P+EATKFK A+ +PEFQ+MLRDYMEEMQDP QR EQE YI++LE Q RVPEGK++VHPLPGFVIK +F RG  D + EKLF NVVTSDKLAKPYSK S++R GGE+WSLPVAVGPLR EKDK G STTTFDVCYHPEALVRA +L+AFRD+V LSSLERVEDAFLR T++K+ VD+
Sbjct:   21 RDFEITPEEATKFKTALGEPEFQAMLRDYMEEMQDPKQRAEQELYISELESQNRVPEGKEVVHPLPGFVIKTRFTRGSKDAEPEKLFTNVVTSDKLAKPYSKISNSRPGGEAWSLPVAVGPLRKEKDKGGGSTTTFDVCYHPEALVRADRLSAFRDLVVLSSLERVEDAFLRGTKEKITVDK 202
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A7S1XY41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY41_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.350e-53
Identity = 85/199 (42.71%), Postives = 134/199 (67.34%), Query Frame = 1 
Query:   22 QEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARG--PGDGQREKLFVNVVTSDKLAKPYSKASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAMMVSK 612
            +E  KF+AA  +PEF+ +L +YM+E+ DPA R EQEAYI QLE   +VP  K+++HP+PGFV+K   + G  P +  REK+F+N+V  +++ +P S  +D    GE+W LP ++GP R+E+DK G    T D+C+HP A++RAQ    FRD++  +++E  E+A  +   Q+  +++ Y +L+GV YK+G  A M++SK
Sbjct:   42 EEVKKFQAAFDEPEFRKLLSEYMDEISDPAHRAEQEAYIRQLEADNKVPTNKELIHPMPGFVVKTHRSGGGAPAEIDREKIFINIVGHERMEEPTSMRTDQ---GENWRLPYSLGPRRVEQDKRGGVVPTQDICFHPTAVLRAQAEQRFRDLIVQTAIEAWEEAAKKVLNQEDKLERAYHVLRGVAYKNGTPATMVLSK 237
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A7S2CZE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZE5_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.230e-49
Identity = 86/211 (40.76%), Postives = 137/211 (64.93%), Query Frame = 1 
Query:   22 QEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQ---QRVPEGKDIVHPLPGFVIKAK-------FARGPGDGQRE-KLFVNVVTSDKLAKPYSKASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAMMVSKKEI 621
            +E  KF+ +  DPEF+SM   Y++E+ DP  R E +AYI+QLE      +VPEGK+++ P P FV+K K          G  + +++ KLF+N+V SDK+  P ++ +   +GG  W+LP+ +GP R+E D+ G +  TFD C+HPEAL +A +   F+D++  ++++ VE A L+ T+QK  +D+ Y +L+GVTYK+G  A MMV K+++
Sbjct:   21 EEQGKFRKSFEDPEFRSMFSSYLDEISDPKHRAETDAYISQLENDPSGSKVPEGKELIRPKPAFVVKTKAKYQAPSMEEGKVNDEKDYKLFINIVQSDKVGAPVAQPA---QGGTQWTLPICLGPKRLENDRNGSTAPTFDACFHPEALTQALRSKPFKDLIVQTAIDNVEAAVLQVTKQKTKLDRKYHVLRGVTYKNGDPAIMMVPKEKV 228
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A6A4ZZ14_9STRA (PIH1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZ14_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.420e-48
Identity = 92/223 (41.26%), Postives = 128/223 (57.40%), Query Frame = 1 
Query:   22 QEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSK---ASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAMMVSKKEINRNQAEEANEAMATPPSAEA 681
            +E   F  AM DP+F+S+L +YM E+ DPA R EQE Y+ QLE + +VP  K +V P PGFV+K K+       ++ K+FVNV +SDK+  P S    ++ +  GG SW+LP  VGP R+E DK G +  TFDVCYHP+ + RA +  AF  ++  ++L+ V+  F         VD+ Y ILKG+ YKSG    M ++              A ATPPS  A
Sbjct:   32 KEQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKY-------KQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGQAIATFDVCYHPQTISRAMESAAFMKMLVNTALDGVDKVFHTLDVDPSKVDREYHILKGIAYKSGNPVTMCIAG-------------APATPPSRAA 234
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: D0NLC8_PHYIT (Protein kintoun n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLC8_PHYIT)

HSP 1 Score: 168 bits (425), Expect = 7.490e-45
Identity = 89/216 (41.20%), Postives = 131/216 (60.65%), Query Frame = 1 
Query:   19 PQEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSKASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAV-DQNYRILKGVTYKSGPCAAMMVSKKEINRNQAEEANEAMAT 663
            P+E TKF +AM DPEF+S+L +YM+E+ DP  REE E Y+AQLE +Q+VP  K +V P PGFV+K K+          K+F+NV +SDK+  P +    + + G SW+LP ++GP R+E DK G S  TFDVC+HP  +  +     +R +V  + L+ VE     +  +K A+  +NY +LKGV YKSG    + + K+        EA+E++ T
Sbjct:   14 PEEQTKFLSAMKDPEFRSLLNEYMQEISDPHNREESERYLAQLETEQKVPTDKQLVKPTPGFVVKTKWEN------THKIFINVCSSDKMQPPSNTRVSSGQQGASWNLPYSLGPERLEPDKGGASVATFDVCFHPRVIEFSMSRADYRHMVVSTCLDAVEPIMRESRRKKDALLARNYHVLKGVLYKSGDPVTLCLKKER-------EASESVKT 216
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A397BQP2_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BQP2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.240e-44
Identity = 92/223 (41.26%), Postives = 128/223 (57.40%), Query Frame = 1 
Query:   22 QEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSK---ASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAMMVSKKEINRNQAEEANEAMATPPSAEA 681
            +E   F  AM DP+F+S+L +YM E+ DPA R EQE Y+ QLE + +VP  K +V P PGFV+K K+       ++ K+FVNV +SDK+  P S    ++ +  GG SW+LP  VGP R+E DK G +  TFDVCYHP+ + RA +  AF  ++  ++L+ V+  F         VD+ Y ILKG+ YKSG    M ++              A ATPPS  A
Sbjct:  128 KEQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKY-------KQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGQAIATFDVCYHPQTISRAMESAAFMKMLVNTALDGVDKVFHTLDVDPSKVDREYHILKGIAYKSGNPVTMCIAG-------------APATPPSRAA 330
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A6U1AP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AP86_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.360e-44
Identity = 89/206 (43.20%), Postives = 129/206 (62.62%), Query Frame = 1 
Query:    7 YYLFPQEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSKASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLR----ATEQKMAVDQNYRILKGVTYKSGPCAAMMVSK 612
            + L   E  KF+ A  DP+F+ ML DYM+E+ DP  R EQEAYI +LE + +VPEGK++V P   FV+K          +  K+F+NVV SDK+A+P  KA+  ++GG S+SLP+++GP RME DK G +  TFD C+HP+AL  A++   F+D+V  +++E VE         A  +K+     Y  LKG+ YK+G  A MM++K
Sbjct:   38 FKLSGDEEHKFRNAFGDPKFREMLADYMDEISDPKHRAEQEAYITKLENEDQVPEGKELVRPSAAFVVKT-HTEDADKAKGSKVFINVVQSDKIAEP--KATP-QKGGVSYSLPLSLGPKRMESDKGGATVPTFDACFHPKALQLAKRDKRFKDLVVKTAMEHVEQQMNAGVSPARHEKLV--PIYHTLKGIDYKNGTPAIMMMNK 237
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A8K1CUS5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUS5_PYTOL)

HSP 1 Score: 167 bits (424), Expect = 1.580e-44
Identity = 99/206 (48.06%), Postives = 126/206 (61.17%), Query Frame = 1 
Query:   25 EATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSKA---SDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRA--TEQKMAVDQNYRILKGVTYKSGPCAAMMVSKKEINR 627
            E  KF  AM DPEF+S+L DYM E+ DP  R E EAY+AQLE +QRVPE K ++ PLPGFV+K K+       + +K+FVNV +SDKLA P S     S    GG SW LP +VGP RME DK G    T+DVC+H   L  A     FRD+V  + L+ VE A LR    E +  + +N+ +LKGV YKSG    M + KKE+ +
Sbjct:   63 EQQKFLQAMQDPEFRSLLNDYMLEISDPENRRETEAYLAQLEQEQRVPENKMLIKPLPGFVVKTKWL------ETQKVFVNVCSSDKLAPPSSTQVAKSAQTTGGTSWHLPYSVGPERMEADKGGARVITYDVCFHTRTLQFATTQRPFRDMVIGTCLDAVE-AQLRQFHREPQGVLSRNHHVLKGVLYKSGDPVTMCL-KKEVEK 260
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: A0A6G0WI70_9STRA (Protein kintoun n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI70_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.680e-44
Identity = 93/225 (41.33%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:   22 QEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSK---ASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAMMVSK-KEINRNQAEEANEAMATPPSAEAK 684
            +E   F  AM DPEF+S+L +YM+E+ DP  R EQE Y+ QLE + +VP  K +V P PGFV+K K+       +++K+F+N+ +SDK+  P S    A+ +   G SW+LP  VGP RME+DK G +  TFDVC+HP+ L R  +  AF  ++  +S++ V+ A L+       V + Y ILKGV YKSG    M +SK +E   + A E+ +    PPS   K
Sbjct:   29 KEQQSFLKAMKDPEFRSLLNEYMQEISDPQHRAEQEMYLRQLENENKVPTDKQLVLPKPGFVVKTKY-------KQKKMFINICSSDKMQPPSSTRIAATTSTAAGTSWNLPYCVGPQRMEQDKGGQAVMTFDVCHHPQTLSRGMESAAFLKMLVNTSIDGVDKALLQLDPSAEKVAREYHILKGVVYKSGNPITMCISKPRETLASNATESQQ----PPSTTTK 242
[Close]
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Match: W4GLA3_9STRA (Protein kintoun n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLA3_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.830e-44
Identity = 92/223 (41.26%), Postives = 128/223 (57.40%), Query Frame = 1 
Query:   22 QEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLEGQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPYSK---ASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQKLNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAMMVSKKEINRNQAEEANEAMATPPSAEA 681
            +E   F  AM DP+F+S+L +YM E+ DPA R EQE Y+ QLE + +VP  K +V P PGFV+K K+       ++ K+FVNV +SDK+  P S    ++ +  GG SW+LP  VGP R+E DK G +  TFDVCYHP+ + RA +  AF  ++  ++L+ V+  F         VD+ Y ILKG+ YKSG    M ++              A ATPPS  A
Sbjct:   32 KEQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKY-------KQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGKAIATFDVCYHPQTISRAMESAAFMKMLVNTALDGVDKVFHTLDVDPSKVDREYHILKGIAYKSGNPVTMCIAA-------------APATPPSRAA 234
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13067.1844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKK0_ECTSI1.890e-9273.63PIH1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1XY41_9STRA2.350e-5342.71Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2CZE5_9STRA2.230e-4940.76Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6A4ZZ14_9STRA4.420e-4841.26PIH1 domain-containing protein n=1 Tax=Aphanomyces... [more]
D0NLC8_PHYIT7.490e-4541.20Protein kintoun n=3 Tax=Phytophthora infestans Tax... [more]
A0A397BQP2_9STRA1.240e-4441.26Uncharacterized protein n=11 Tax=Aphanomyces astac... [more]
A0A6U1AP86_9STRA1.360e-4443.20Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A8K1CUS5_PYTOL1.580e-4448.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WI70_9STRA1.680e-4441.33Protein kintoun n=1 Tax=Aphanomyces euteiches TaxI... [more]
W4GLA3_9STRA1.830e-4441.26Protein kintoun n=1 Tax=Aphanomyces astaci TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13067contigS-dermatodea_contig13067:1980..6558 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score279.3
Seed ortholog evalue1.7e-72
Seed eggNOG ortholog2880.D7FKK0
KEGG koko:K19751
EggNOG free text desc.axonemal dynein complex assembly
EggNOG OGsKOG4356@1,KOG4356@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons5
Model size708
Cds size708
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13067.1844.1prot_S-dermatodea_contig13067.1844.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13067 1980..6558 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924272.3112392-CDS-S-dermatodea_contig13067:1979..21401622924272.3112392-CDS-S-dermatodea_contig13067:1979..2140Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 1980..2140 -
1694079141.1259696-CDS-S-dermatodea_contig13067:1979..21401694079141.1259696-CDS-S-dermatodea_contig13067:1979..2140Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 1980..2140 -
1622924272.3260956-CDS-S-dermatodea_contig13067:3330..34921622924272.3260956-CDS-S-dermatodea_contig13067:3330..3492Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 3331..3492 -
1694079141.1374257-CDS-S-dermatodea_contig13067:3330..34921694079141.1374257-CDS-S-dermatodea_contig13067:3330..3492Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 3331..3492 -
1622924272.3445425-CDS-S-dermatodea_contig13067:4307..44371622924272.3445425-CDS-S-dermatodea_contig13067:4307..4437Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 4308..4437 -
1694079141.1469798-CDS-S-dermatodea_contig13067:4307..44371694079141.1469798-CDS-S-dermatodea_contig13067:4307..4437Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 4308..4437 -
1622924272.3558314-CDS-S-dermatodea_contig13067:5899..60341622924272.3558314-CDS-S-dermatodea_contig13067:5899..6034Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 5900..6034 -
1694079141.1567347-CDS-S-dermatodea_contig13067:5899..60341694079141.1567347-CDS-S-dermatodea_contig13067:5899..6034Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 5900..6034 -
1622924272.3646586-CDS-S-dermatodea_contig13067:6438..65581622924272.3646586-CDS-S-dermatodea_contig13067:6438..6558Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 6439..6558 -
1694079141.1663353-CDS-S-dermatodea_contig13067:6438..65581694079141.1663353-CDS-S-dermatodea_contig13067:6438..6558Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13067 6439..6558 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13067.1844.1

>prot_S-dermatodea_contig13067.1844.1 ID=prot_S-dermatodea_contig13067.1844.1|Name=mRNA_S-dermatodea_contig13067.1844.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=236bp
RAYYLFPQEATKFKAAMADPEFQSMLRDYMEEMQDPAQREEQEAYIAQLE
GQQRVPEGKDIVHPLPGFVIKAKFARGPGDGQREKLFVNVVTSDKLAKPY
SKASDNRRGGESWSLPVAVGPLRMEKDKTGDSTTTFDVCYHPEALVRAQK
LNAFRDIVALSSLERVEDAFLRATEQKMAVDQNYRILKGVTYKSGPCAAM
MVSKKEINRNQAEEANEAMATPPSAEAKVRRYFPN*
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mRNA from alignment at S-dermatodea_contig13067:1980..6558-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13067.1844.1 ID=mRNA_S-dermatodea_contig13067.1844.1|Name=mRNA_S-dermatodea_contig13067.1844.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4579bp|location=Sequence derived from alignment at S-dermatodea_contig13067:1980..6558- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGCGCTTATTATCTTTTTCCACAGGAGGCCACCAAGTTCAAGGCGGCGAT
GGCAGACCCGGAGTTCCAATCCATGCTGAGGGATTACATGGAGGAGATGC
AGGATCCTGCCCAAAGAGAGGTGACCACCCGCGGGTCTCGAATGGTGCTG
TTTGCGATTCCCGTCCTACGTGGGAGTCGCCACTTTAATATCGTCACCAG
CAACGTTTCGAACGCACCGCCGACAACGTTTCAGACGCATTGTGGTGACG
TCGATGCGGGTGTGCGTATCAAGTCCCATGCAGCTCTCGAGTGTGGCCAG
CTACATACACTGGTGTGCTCACAATAGGGCACGAATCGCACGAGCGGTGT
GCAGACAGGAACTTACAGCGTTTGCCTTGTCTAATGAATGCAGCCACACA
ACCCAATTTGTAGTTGTAGACAAAAAATATCATCCCCGCAGCAGTCGTAA
ATTGCAGTAGGATCGATGGTCGCGTAATCTGGTGATGCTGAGTGCATACG
CATTCACGCCGCACCGCTCGGCAGGAACAAGAAGCGTACATCGCCCAGCT
AGAGGGCCAGCAGCGCGTTCCCGAGGGAAAGGATATAGTACACCCTCTTC
CGGGTTTCGTGATCAAGGCCAAGTTTGCGAGAGGCCCCGGCGACGGCCAG
CGAGAAAAGGTGCGGGGCAGATGAGCGAGAACCTCCTGTCGTCTTTGGCA
AAAGTCCGGGAGCGGAGATGAAGGTTTACCAAAACACGTTTTTCGTTTTT
TTGGCACACATGTGATAGACTTTCTTTTCCCAGGTCCATCTGTGGTCACA
AGGGATCATCCCATCTCTCTTATCCCCGATTCTCACCTTTGGTTTTTGTC
GCGCATTGGGTTCGGCACTCCCGCAGCTCGCCGATTCCCAGATTCGCCGT
GTGTAGTGATTGATTGTTTGATTGAGTGATTGATAGTTACACTTATAAGC
TACCGGCCCACCAATAAAATAGTGGTTGCCGGTCCCGCTCGTTTGTGGTC
AGATGAGAGATCGAGAGATCGAAAAACAAAAACGGAATTGTATACAGATC
TTCAGCAGGGACGTGTCGTTTCCGTGGGGTGATGGAGATTCGCCCTTCAA
GGGTACCGTAAGACACAAGCACCGGTGAGTCCAACAAGTGCGTTTGAGTT
GGCCCAGGAGCCCGGCGGCCGTCCCGTGGATACACACTACCCACCGATGC
TTGGATACAGTTATGTCCCCCTGTATCACACGATGGTCGTGACTGCCCAG
GCTTACGGTATTTAGGCGAAAAAAACTGCAGCGACACCTGAAGTTTGTCG
ATATCACGTGTTCCTTCGTGTGCCACCCCCCCCCCCCCGTTTGGCCAAGT
GTCAGAGACGAAGGAAAGGGCTGGGATAAGGCGATAGAGAGGGTCATTTG
GGAGGCAAAGGCGCGGCGTGTGTGTATATGTGTCACGAAAAGACGTAGTC
CAGGCCGGCCTTTTCAGCCGCCTGCGGAATCCGCACGTATCCCTTTCGGT
GCTCCCTTTTTCTCCCGTAAAGCAAGAAATGATCATGATTTGAAAAATAC
AGAGCGAGCCTTGGGGTCCAACCTTGTCCAAGGAAGAAAATCTGGTCCAA
AAGCTACAATACGCATATGGAGGTTTGGTTTTACTTGACTACGCTGCGTA
CGATGCTATGAATATGCTTTTCAAAGATGGAGATTGTAGTGGACATGTAA
TTTGAGGCAGGGGTATACAATCAGGTCCACAGCCTACAAGTGTATTTTTG
AATCCGGTACAATCAATGCTTGTACCCCTATGATAAAACACGCGTATTTT
TTAAATCAATATTTTTTTAATCAATACGACCAGGTACAATTATAACTGAC
TGAAACACTGTTGTAGACTCATAAAGTACACGAGTTACACGTGCACAAGT
CAGTACACTAAAATCTCCACCTTTGATTGGTTTAACTTACTTTTGTCCGT
TTTCTCGCCGAGCCTCTCTCTCTCTCTCTCACCAAGACGCCCGCGGCGCT
ATCCAAGCTCAAAACCCATATCCACCACCCCTCTGCGAAACCCTTCGCGT
TAGTTATAACCCACGTGTCGGTGTCGGCGTGTCTCGTTGCTTCTCATGTC
CCCCGTTTTCCCCGCGCACAGCTGTTCGTCAACGTGGTGACGTCCGACAA
GCTTGCGAAGCCGTACAGCAAGGCATCTGACAACCGACGGGGGGGGGAGT
CCTGGTCGCTGCCGGTCGCTGTGGGGCCCTTGCGCATGGAGAAAGACAAA
AGTAGGTTGGCGCGGCGTCTTTTTTTTTTCGCGTGTTTGTGTGTTTGTGT
GTTTGTGTGCTTAGCCCTTTGGGGAGTGGGTTGGTTTTTGTTTTTTCGGG
TCTACCCGACTCCGCCGTATTTCACATCGAACAATGTGCAATGTGTAGTA
CTTGTACCCGAACGATGGATTGCTTCTCGCCGCACGTAGCAGTAGTAGCA
GGGGGAAAGTGATAACCCTGCCGCGAGTTGTAGCTATAATATGTAGCATG
CACGCGGTGCGCAAGTGTGTGCACCCTCAACGCAATGTATCCGAAGCGAT
GCCATTGACATTTCAAGCAAACGAGTTCAGAGCCGAAAGGAATAAGAGGG
GGGTGTCGTGGGTCGTCTCTACAATAGCACCAGGGGTAGCCCCCATATTC
TTCTTATGAATAGCTCGAGCTCCTTAAGGGTGGGGCTCAGGTACCTTGCG
CCACTGAGAAGGGTGGATCTCAGGCGTCAACTTTTTGTTTTGGGACGGTG
TTTTTTCTTCTTGAGGGGTGTCGTTGGGCGGTGCAAACAAAAATTCCCGT
CTTTGCCTTTGCGTGGTACGCGCCAATGTATACCGTCCGTGTAAAGTGGA
GCGATGCCATCAAAACTCCAAATGCCCGCCAAGAGGCTCTAGTGTTATCC
GCGGCAATGCTGAGTGGGTGAGCTACACCATCGATCCTTCGCGTCTCCAG
GCCGGGACTCGAACATGGGAGGCTGCTCCCACGTAGTACCTCACATCCTC
TGTACCTGCCGCGACGTTTTTTTTTCGTCTGCCTATGATATCCTTCTGTG
ATTTGGTGCTTCTCAGCGGGCGACAGCACGACTACGTTCGACGTTTGCTA
CCACCCGGAGGCTCTGGTGCGAGCGCAAAAGCTGAACGCTTTCCGCGACA
TCGTGGCGCTTTCATCGCTGGAGAGGGTAGAGGACGCGTTTCTGAGGGCC
ACCGAGCAAAAGATGGCCGTCGACCAGAGTGAGCCGTTTCTTCGGTTTTG
CCTTTTTTTTCCGCCCGGTTCTTGTGTTTACGGTGAAAGTGAGATTCGGC
AGCCAGAGATCGTGACACGTAGAACTCTTATTTTTGTACCGCCTGGTTGT
TCGAGCAAATGTTAATGGTGCTTCATGCTTCTCCGGTGTGATGAGCGACG
CGGAGTCAATCAGTGGCCCGACGGCCTTGCTCGTCGAGACGCGTGCGGCC
AATATCGTTAGCCCTGGTTATGCATGATATTCTTAAACTAAAAGTACACG
TTCAAGGTTTCCTGCTGCTGACGTCGCAACGTTCTGGGGAACGCGTAGCC
CAAGGCCAACGACACTGCAAAGGAGAGCACAATGACGTATTAATAGTGTG
ATGTCATTATGAGTGGAAGGACGCACGTAAAATGCGCCTCGATGGTGTGA
TACATTCTAAATTCACGGCGATATGAATGAATTGTGCACAGGCAGCCGGT
AGCAGCGGTGCTTGTGCTCGCCCTTGTATTCGTACTGATGGCCCCCACGC
ATCGCTGATAGAGCGAGAGCGGGAACGAAGCGCTCCCATGGCTCTCAGGG
AGGGGACTTTACCAAGTGGTCGGCACTTAAAAAAATTCCGAGATACTTCT
GAAACACAGCTTTACTAATTGTGTTTTGAAAGCGCTGGGACGGCGCCCCG
GGCGTCGACCCTACCCACCCTAACCCCTACCTTGACCGCCCTCAAAACCT
TCATGCGAGGCCTGTAGCGCCCCAAACGCGGCGCAGCCGCGTTTGAGCCA
TGTGTTCTTAACGACCATTGCGACCACATTCCGACCAAAGACTAGACTGT
CAGCTTTGACCAGTAAAAAACGCGGGATATGACGGGATATGCATTTGTCG
ACCAACTGTCAAAGTCTACTGCTCTCAGGCGCCGAGAGCAGGGCTGGTGG
TCGGCACGCATCGTTTTCAGGGAAGCGGCAAGCGTACATAGAGAGAACTA
TGTTGATGAGTGAAAAACGCGTCGGACGTTTTTTAAGAGCGATTTTAGAG
CGATCATACCCACACTGAACTTCTATACGATTTTGAGGCCAAACAAATTG
ATTTTAGAGTTGAGCGGCCACGCATTCCTCACGGGCGTAGCCTTGCCTAC
CTACTAGTATATATTATTACATCTTGTAATTCTGCTCTCCGCTCATCGCC
GCTATGATATGCTCGAAGACTACCGGATCCTGAAAGGTGTGACGTACAAG
AGCGGGCCGTGCGCGGCGATGATGGTGTCGAAGAAGGAGATCAACCGCAA
CCAGGCGGAGGAAGCCAATGAGGCTATGGCGACCCCTCCATCGGCAGAGG
CGAAGGTGAGACGTTATTTTCCTAACTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig13067:1980..6558-

>mRNA_S-dermatodea_contig13067.1844.1 ID=mRNA_S-dermatodea_contig13067.1844.1|Name=mRNA_S-dermatodea_contig13067.1844.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at S-dermatodea_contig13067:1980..6558- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGCGCTTATTATCTTTTTCCACAGGAGGCCACCAAGTTCAAGGCGGCGAT
GGCAGACCCGGAGTTCCAATCCATGCTGAGGGATTACATGGAGGAGATGC
AGGATCCTGCCCAAAGAGAGCGCGCTTATTATCTTTTTCCACAGGAGGCC
ACCAAGTTCAAGGCGGCGATGGCAGACCCGGAGTTCCAATCCATGCTGAG
GGATTACATGGAGGAGATGCAGGATCCTGCCCAAAGAGAGGAACAAGAAG
CGTACATCGCCCAGCTAGAGGGCCAGCAGCGCGTTCCCGAGGGAAAGGAT
ATAGTACACCCTCTTCCGGGTTTCGTGATCAAGGCCAAGTTTGCGAGAGG
CCCCGGCGACGGCCAGCGAGAAAAGGAACAAGAAGCGTACATCGCCCAGC
TAGAGGGCCAGCAGCGCGTTCCCGAGGGAAAGGATATAGTACACCCTCTT
CCGGGTTTCGTGATCAAGGCCAAGTTTGCGAGAGGCCCCGGCGACGGCCA
GCGAGAAAAGCTGTTCGTCAACGTGGTGACGTCCGACAAGCTTGCGAAGC
CGTACAGCAAGGCATCTGACAACCGACGGGGGGGGGAGTCCTGGTCGCTG
CCGGTCGCTGTGGGGCCCTTGCGCATGGAGAAAGACAAAACTGTTCGTCA
ACGTGGTGACGTCCGACAAGCTTGCGAAGCCGTACAGCAAGGCATCTGAC
AACCGACGGGGGGGGGAGTCCTGGTCGCTGCCGGTCGCTGTGGGGCCCTT
GCGCATGGAGAAAGACAAAACGGGCGACAGCACGACTACGTTCGACGTTT
GCTACCACCCGGAGGCTCTGGTGCGAGCGCAAAAGCTGAACGCTTTCCGC
GACATCGTGGCGCTTTCATCGCTGGAGAGGGTAGAGGACGCGTTTCTGAG
GGCCACCGAGCAAAAGATGGCCGTCGACCAGACGGGCGACAGCACGACTA
CGTTCGACGTTTGCTACCACCCGGAGGCTCTGGTGCGAGCGCAAAAGCTG
AACGCTTTCCGCGACATCGTGGCGCTTTCATCGCTGGAGAGGGTAGAGGA
CGCGTTTCTGAGGGCCACCGAGCAAAAGATGGCCGTCGACCAGAACTACC
GGATCCTGAAAGGTGTGACGTACAAGAGCGGGCCGTGCGCGGCGATGATG
GTGTCGAAGAAGGAGATCAACCGCAACCAGGCGGAGGAAGCCAATGAGGC
TATGGCGACCCCTCCATCGGCAGAGGCGAAGGTGAGACGTTATTTTCCTA
ACTGAACTACCGGATCCTGAAAGGTGTGACGTACAAGAGCGGGCCGTGCG
CGGCGATGATGGTGTCGAAGAAGGAGATCAACCGCAACCAGGCGGAGGAA
GCCAATGAGGCTATGGCGACCCCTCCATCGGCAGAGGCGAAGGTGAGACG
TTATTTTCCTAACTGA
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