mRNA_S-dermatodea_contig13054.1841.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13054.1841.1
Unique NamemRNA_S-dermatodea_contig13054.1841.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.570e-40
Identity = 100/285 (35.09%), Postives = 152/285 (53.33%), Query Frame = 1 
Query:   43 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV-KNGSPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSRNVSCIESYAPPTKRSGVSSESVIGRVPCFSGV-RPQ-HQQVQHF*SDPSIGGQRKNGSACHHRKPLVV 888
            M+  CW+ +   G IKALK+ E   SN LA+TNLAIC+NLA++V+SHRT SRV   S+P L+++F+ +S V AA SVPF  I V +G + +       +   +++S  ++E +  + M +IV+ L+ FR   +++ WKLH RI+ +F LT+I    N+A+   G  YV +  +  +L+  +W  R  H+ALDT+VLY  LG    D                E        SG SS    GR+P  SG+ RP  H+ ++      +       G+ C  + P  V
Sbjct:    8 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMD----------------EGGGSAASTSGTSS----GRLPASSGLPRPSNHRGMKKQSGLSNTSSTASGGAVCSTQGPRQV 272
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 3.920e-40
Identity = 98/228 (42.98%), Postives = 129/228 (56.58%), Query Frame = 1 
Query:   43 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYVKNG-SPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSRNVSCIESYAPP 723
            MVL CW      G +KALKF ELV SN LA+TNLAIC NLA+++ SHRT +RV+  SSP L+ + + VS  VA  + PF    V +G       +       L +S F +E +  + M VIVA LLLFR  E+++ WK+H RI+ +F LT+I  T N+A+   G  YV  G     L++ +W  R IHIALDT VLY  LGV +     E   GP     C  + A P
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLGVPAATGHDE---GPDAQRRCSAAAAAP 225
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 8.810e-37
Identity = 93/240 (38.75%), Postives = 140/240 (58.33%), Query Frame = 1 
Query:    1 SGLVHLLGEVVLEQMVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAI-TAGGIFYVKNGSPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSR--NVSCIES 711
            SGLV  L  VV + MV  CW +   +G IKA+KF E V SN +A+T+LAICVNLA+IV SHRT +RV+  SSP L+ + + +S  + +V+VP  +     G   +      G    +V+S F +E +  + M VI+A LLLFR  E+++ W++  RI+ +F LT++    N+ I     +F + +     L I SW+ R IH+ALDT VLY  L     + +++ R G +R  N +C +S
Sbjct:   59 SGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLR----EKDMDERGGNARSSNYNCNDS 294
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.070e-36
Identity = 86/182 (47.25%), Postives = 116/182 (63.74%), Query Frame = 1 
Query:    1 SGLVHLLGEVVLEQMVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV 546
            SGL+H L  +    MV  CW  D    +IK LKFFEL  SN LA+TNLAICVNLA+IV SHRT SRVR AS+P L+++F+ +S  VAA+SVPF    V +G + +           +V++ F VE    + M+VIV  L++FRR E++Q WK+H RI+ +F LT+IA   N+A+   G  YV
Sbjct:   85 SGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 4.300e-35
Identity = 87/228 (38.16%), Postives = 129/228 (56.58%), Query Frame = 1 
Query:    1 SGLVHLLGEVVLEQMVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV----KNGSP-IWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELE 669
            SG +  L  +  + MV  C+     +G+IK + F  +  SN LA TNL IC+NLA+IV SHRT +RV+  SSPR++ + +LVSA +AA +VP  +  V  G   +     P +   +++S +++E +  + M+VIV  L +FR  E+++ W+ H RI+ +F LT+     N+ +   G  YV    K   P IW    SW+ R IHI+ DTLVLY AL   S D   E
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIW----SWLFRYIHISFDTLVLYGALREGSIDERAE 232
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.250e-34
Identity = 86/219 (39.27%), Postives = 131/219 (59.82%), Query Frame = 1 
Query:   43 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYVKNGSPIW--LVIGSWILRDIHIALDTLVLYTALGVSSFD--LELEPRHGPS 687
            M+  CW  +     IK LKF EL  SN LA+TNLAICVNL++IV S R  S V+  S+ +L+++F+ +SA +AA++VPF  + V +G   ++ G++      ++IS F+VE +  + M VIV+ LLLFR  E+++ W +H  ++ +F LT++    N+ +   G  YV +    W  L+I SW  R + IALDT+VL++ L   S D   E  P  G S
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMA-WPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAETPPTDGAS 218
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.500e-34
Identity = 90/247 (36.44%), Postives = 133/247 (53.85%), Query Frame = 1 
Query:    1 SGLVHLLGEVVLEQMVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYVKNG-SPIWLVIGSWILRDIHIALDTLVLYTALGVSSFDLELEPRHGPSRNVSCIESYAPPTKRSG 738
            +G++  L  +V + MV  CW       +IK +KF EL  S+ LALT+LAICVNLA+IV SHRT  RV+  SSP L+ + + +S  + A +VP  +  +  G S +      G+   +V+S F +E I  + M VIVA LLLFR  E+++ W++H RI+ +  LT++    +++I      +V  G     L I +W+ R IHIALDT VLY  L     D  +        N +      PP+   G
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVGNARPSDINSNSTVGVPPPSTLHG 256
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.650e-33
Identity = 69/168 (41.07%), Postives = 109/168 (64.88%), Query Frame = 1 
Query:   43 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV 546
            M+  CW+ +   G IKALK+ E   SN LA+TNLAIC+NLA++V+SHRT SRV+  S+P L+++F+ +S + AA SVPF  I V +G + +       +   +++S  ++E +  + M VIV+ L+ FR   +++ WK+H RI+ +F LT+IA   N+A+   G+ YV
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYV 168
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BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.570e-26
Identity = 74/170 (43.53%), Postives = 104/170 (61.18%), Query Frame = 1 
Query:   43 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRV--LVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFYV 546
            M+  CW       +IK LKF EL  +N LA+TNLAICVNLA++V SHRT SRV   SSPR++ + ++++   AA +VP     + TG   Y +  S  +Q +   V+S FL E I  + MI IVA LLLFR  E+++ WK+H RI+ +F LT+IA   N+ +   G  Y+
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGT--YFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYI 168
[Close]
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 6.690e-23
Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 1 
Query:   43 MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTFSR-VRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQRVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALTMIAITANVAITAGGIFY 543
            M+  CW     + +IK  KF EL   N LA+TNLAIC+NLA++V SH      V   SSP L+V+ +++S   AA + PF +  + +G   +   ++      + IS F +E    + M VIVA LLLFR  E+++ WK+H RI+ +F LT+IA   N+ +   G+ Y
Sbjct:    5 MISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIY 172
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13054.1841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5K8K6_9PHAE2.570e-4035.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN1_ECTSI3.920e-4042.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTK5_ECTSI8.810e-3738.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM4_ECTSI1.070e-3647.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWL8_9PHAE4.300e-3538.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNP0_ECTSI1.250e-3439.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTK4_ECTSI1.500e-3436.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN2_ECTSI1.650e-3341.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE1.570e-2643.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI6.690e-2338.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13054contigS-dermatodea_contig13054:971..6454 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Exons4
Model size2148
Cds size777
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13054.1841.1prot_S-dermatodea_contig13054.1841.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13054 1013..5125 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924272.1608493-UTR-S-dermatodea_contig13054:970..10121622924272.1608493-UTR-S-dermatodea_contig13054:970..1012Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13054 971..1012 +
1694079141.034566-UTR-S-dermatodea_contig13054:970..10121694079141.034566-UTR-S-dermatodea_contig13054:970..1012Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13054 971..1012 +
1622924272.2146862-UTR-S-dermatodea_contig13054:5125..64541622924272.2146862-UTR-S-dermatodea_contig13054:5125..6454Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13054 5126..6454 +
1694079141.0855117-UTR-S-dermatodea_contig13054:5125..64541694079141.0855117-UTR-S-dermatodea_contig13054:5125..6454Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13054 5126..6454 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924272.1723733-CDS-S-dermatodea_contig13054:1012..11471622924272.1723733-CDS-S-dermatodea_contig13054:1012..1147Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 1013..1147 +
1694079141.0500684-CDS-S-dermatodea_contig13054:1012..11471694079141.0500684-CDS-S-dermatodea_contig13054:1012..1147Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 1013..1147 +
1622924272.1835551-CDS-S-dermatodea_contig13054:2394..25501622924272.1835551-CDS-S-dermatodea_contig13054:2394..2550Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 2395..2550 +
1694079141.0617602-CDS-S-dermatodea_contig13054:2394..25501694079141.0617602-CDS-S-dermatodea_contig13054:2394..2550Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 2395..2550 +
1622924272.1933808-CDS-S-dermatodea_contig13054:4189..43031622924272.1933808-CDS-S-dermatodea_contig13054:4189..4303Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 4190..4303 +
1694079141.0695355-CDS-S-dermatodea_contig13054:4189..43031694079141.0695355-CDS-S-dermatodea_contig13054:4189..4303Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 4190..4303 +
1622924272.2017884-CDS-S-dermatodea_contig13054:4753..51251622924272.2017884-CDS-S-dermatodea_contig13054:4753..5125Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 4754..5125 +
1694079141.077267-CDS-S-dermatodea_contig13054:4753..51251694079141.077267-CDS-S-dermatodea_contig13054:4753..5125Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13054 4754..5125 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13054.1841.1

>prot_S-dermatodea_contig13054.1841.1 ID=prot_S-dermatodea_contig13054.1841.1|Name=mRNA_S-dermatodea_contig13054.1841.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=259bp
MVLNCWLKDGALGVIKALKFFELVGSNTLALTNLAICVNLAVIVHSHRTF
SRVRGASSPRLMVMFVLVSAVVAAVSVPFGDIWVATGLSVYQNGKSPGRQ
RVLVISYFLVEAICSVVMIVIVALLLLFRRPELRQVWKLHRRIKTHFALT
MIAITANVAITAGGIFYVKNGSPIWLVIGSWILRDIHIALDTLVLYTALG
VSSFDLELEPRHGPSRNVSCIESYAPPTKRSGVSSESVIGRVPCFSGVRP
QHQQVQHF*
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mRNA from alignment at S-dermatodea_contig13054:971..6454+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13054.1841.1 ID=mRNA_S-dermatodea_contig13054.1841.1|Name=mRNA_S-dermatodea_contig13054.1841.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5484bp|location=Sequence derived from alignment at S-dermatodea_contig13054:971..6454+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGCGGCCTTGTCCATTTACTCGGCGAAGTGGTGTTGGAGCAGATGGTGCT
GAACTGCTGGCTCAAGGACGGGGCGCTGGGCGTTATCAAAGCCTTGAAGT
TTTTCGAGTTGGTAGGGTCGAACACCCTCGCCCTCACCAACCTGGCGATC
TGTGTCAACTTGGCCGTCATCGTCCATGTGAGCAATCCTCACAGTACTAC
TGCTGTGCGCGTTGGTTGATTGATTCATTTACGAGTTGATTTGCACACGT
ATATCCGATCGGCTTGATCCGACGCGACTTGTGGCCAGATGCTATACAGC
AAAAGAGTCAAGGAGAACATAACAAAAGGAGTAAACAGAACTCTACGACA
CTTGTACAATACAGCAATACCGTCCCTGGTGCTTACTTACTATTACTATG
GCACAAGAGAGAAGAAATAGTAACCCCAGATATAGAAAAGGCCGGTAGGG
CAATCGGAATCGGACAATAATGCTTCCTCTCTCGTAAGGCGTAATTAGCT
CTTTGGCGAAACGTCACCCGAGGCTACTCTATGCCCCTGCAGCCGTAGAC
GTCGTCCTTGGGCTCAGTTCCACAGCAGGCCCTGACTAGAGCCCTGTGCC
AAACGAGTGAGCATCTTTATTAATCAATGCCGCTCTGTCCGCGCTTTCCA
AACGATTTCCTATACGAATTTTGAGGCCGAGATTACTGAGGGATTGTTTA
GGCCGATTTCGTACACTAAACTCCAAAACGATTTTGTGATTTTTAGTGCG
GTCGCTCACCTCACCGGCGTAGCCTAGCCTATTAGTGGCTACATACTATT
TATAGTTAGATATTACAGTTTTGAGTAAAATTCTGCAACAAAGTTAGTTT
AGAGTCTTGTTTGAGTGAGCATTTATCAGGTTATTATGTTATTATAACCA
AAACGACCCTTTCGGTCCTCGCAGTGGTGTTGTGGCATCTATCTCCGAGA
TTTCCAAACCTGCATCGTGTTAGCTGACGGTGCAACGCGCTGGCCGATAG
CAAAAGCGAACCCTTCAGACGTCTTGTGGTGTTGTACCGTGCGGCGTGGC
CGTGTACATTTTACGCTCCTGTGTTTGTTCGCCTCTATCTGGAGGGCGGC
ATGGACGATGCGGCTACCCCTCCGCCCCACATTAGCACGAACGCCTTGCG
TGTTATTTCGAGAGGGGCTCTGAGCGGGGCTTTACCCCGTCGCACACCGC
CAAGGCTTCTCACAACCCGTAGCACGTGGCTCTTTGATGTCAACGAACAT
GGCCGCCCGCGCCTTCAGCACAACAGCGCAAAATATAACACTTTCTGAAA
TATTAACGACAGGCAAGTTAAAAAATATCCCCTGAGCGTCATCCTTCCCG
TCTCCGCCCGGCCCTTCTTACGTGATTACATGCGTCCGCTACCGCCCATC
GCAACAATTGCCGTTGTCCTGCAGAGCCACCGCACTTTCTCTCGCGTGAG
GGGTGCATCGTCTCCTCGACTGATGGTGATGTTCGTTCTGGTGTCGGCGG
TGGTGGCAGCGGTCTCCGTACCGTTCGGAGATATTTGGGTGGCAACCGGA
CTCTCCGTTTATCAGAACGGCAAATCACCGGTGAGATACTGTCCGGTGAA
TGGTGTGCTGGTCCTAATGGTGCATGCAGTCTGCCGTTTTCTTGCAGGTG
CTGAAAAGCTGAGAGCTGAAAACCCCCATTGCAGACACGGACTTGGCAAT
CAAACAACACGCGGTTGTTTTATTTTAATTTTTCCCCAGTTTGTGCGGTG
AAGCGCGGTCCTTCCGTCGAAACTGGGGTCGATGTGTTTTTTTTGCGCTC
ATGGCCGTGCACAACAGGTGTCCATCGCGATCTCGCAGGTGGCGCTTCGT
TGGGAATATCGATCAAGGTTAGGGGCTTGACGGGGCCGGTCCCGTTGGCT
TTGAAAATTGCTCGGCACCGAAAATTGCTTAGGCACGCAGTCTTTGCGGG
TTTTCCACGGAGTGTTTTTAAAAGCCAGGGAGACACGTTAGGAACATTTC
TTCCTCGAGTTTTTTTTTGCGCTTTCAAAAGTTCAAAGGCCGCAACATGC
ACAACAGGGATTGGGCGCGCCGCGCCGAACCACGCTTTTTGTTAATAATT
TTTGCTGGTTTTTAGTGGTCCCCCAGAAACGCTGGTCAGAACAGTTTTTG
ACAATTTTTGCTTTGGTGCCGATATGATACTTACTTTGCCTCTCGAACGA
ACGCTGTAATCGCACGAGAGGGGTTGTCTAAGTGAGGGTGGTTCAATTTG
CGCCGCCCTCTGCTGCTCTTGCAGCGTTCAAGAGGCCGCATCCGCCGAGA
AATAGGACGACACCTGGTCCACCAAAGTTCCTGACGACCACTCGAAAACT
GCGAAACACCGCGCGGCTTCCGGCGCGCCAACCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCGCCACACCCCCCGCCCGGACGAAGGCGGCC
CCAACACCACCCCCCCCCCGCAAGAAAACCACAAACACCACACCNNNNNN
NNNNACCCCTCCAAGTCCCCCTAATTTTGTCGCGCCCCTTCAAAAACCCC
AAACCCCCCGCCGGTTCCCGCCCGCCCCACCCCCCCCCCCCCCCCCCGCT
ATTCGCGGCCTTCGAAGCGCAAAAGTGCCTGAGGAAGAGAGGCGCCTAAC
AACCTTGCCTGGCTTTAGAAAAAACCGGCGGAAACCCGTGACTAAGACTG
CGCGCCTCAATCGCCTTTCTATACGGCACAATCTCCAAGTCAACGGGACC
GGCCCCGTTAAGGGCGTTCCTTCGAAGAATCGGTTGTGCCCTGCCCAGCC
CAGCACATGCTCTGGATACTGTATCATTAGGGCTCAGCTCATGCCCTGAC
AATTTCCAAGCCCTTTCCCCCCCCCGCCATGAAGAGACGTATACTTGAAC
AGCATCTTCGTAGTCACGGTACTTGTAGCTTGCGTGGCGGTGTCATGGTT
TTGGGATTCAATCACCCTCCTCCCATCACGACCTTGTTATCACACTGTCT
GTGAAAGCGGCGTTGTTGTTGATCTCCTCGGCTAACCTGGACAGGGCAAA
ACACGGCCGACCGGCGATAACCCTTCAAGGACGACTTGTCCGGTACATCC
TCCACCCGTGCTTGCAACACACACAAATAACCCACCCATCATACTTTATT
GCGACCTTGTTGGAGTAGTGTCTGCTGCAAGCGTTTTGAAGATTCTGTCG
CCCCGATCTTTTTCCCCAGGGACGGCAACGAGTCCTTGTAATCTCCTATT
TCCTGGTGGAGGCAATCTGCAGCGTTGTAATGATCGTCATCGTTGCACTC
CTTCTACTCTTTCGCCGGCCCGAGCTACGCCAGGTAAGAACCGCCTTCCC
CGACAAAGGGATTGCCCCGACGCTGCCCGACGGCTGAGCCAAGTATTGCA
CTTGGGGAGTCGCCTGGACCAGTTCTACTACAGTAGGGATATTTTATTTC
GGGCGGCCGGTGGAATCATCTCAGTTTTGTGTACATCAAGGTATACCCTA
ATTCTGTATCGATGAGTTGTGGGTTGTACAAGTACACGTTCTATGTTCTG
TTTCTTTACACAAAAAATCTGCACATGAGAACCACGACACTGCCCTTACT
GCATGACCTTTGCTGGCCCGTAATCGATTGTTGATATGATGATAGTAGAA
TAGTCACACGATGCTTATTTAAATAGGCAACGCCACCCTAACCAACGAGT
TCCTGCCCCAACGCCCCTCACTCAAACCGCCACATGAACGATTGCCCTAT
ATATCTTTGTATATATATATATGTGTGTGTTAGGTGTGGAAGCTGCACCG
TCGTATCAAGACCCACTTCGCCCTCACAATGATCGCCATCACCGCAAACG
TGGCCATAACAGCCGGCGGGATATTTTACGTAAAAAACGGTAGTCCCATC
TGGCTAGTGATCGGCTCCTGGATCCTGCGAGACATACACATCGCCCTGGA
CACTCTCGTACTCTACACCGCGCTTGGCGTTTCTTCGTTCGACCTGGAGT
TGGAGCCAAGGCACGGACCGAGCAGGAACGTGTCCTGCATCGAAAGCTAC
GCTCCTCCCACGAAACGGTCGGGCGTCAGCTCTGAATCGGTAATCGGGCG
AGTTCCTTGTTTCTCAGGCGTTCGGCCACAACACCAGCAGGTGCAACATT
TTTGATCCGATCCGTCCATCGGAGGTCAGAGAAAGAATGGGAGCGCGTGT
CATCACAGAAAGCCACTGGTGGTGGACCTCGCCTCCCCTTCGTTGTTTTG
CTTTTATCCAGGTATTGACTTACGCAGTACCTAGTCTGCGCGTACCCTAG
CCTTTAATTCCCATTTATTTTTAAAAGGCCTCTCAGTCTATACAAGAAGA
AGAACTGTCGATCTGTATGATAGTATAGCTTGTCTTGGGTCGGAAATAAG
TACACAACTGAGAGAGAGAGAGGGAGAGAGAGAGATGGGTTGTTTCGGTC
GTATGCGATAATTTGCCGCATGTGTGTCTGTGTGTGTGTGTGTGTCCTGC
ACAATCGCGGGGGGCGACGTGCTTTTACTTTAGTTCCGCATGGTGTGGGA
ACGCTTCGCTGCTCCCACGCGAGTGCCATCTGCACCGCGTGTCTCATGAT
TACATGTTGATAGTATTATGTGCTCTACGACTTCCGCAACTTAGCGTTGT
GATGTACTTGTTTCATCGGGAATCCGGGATCCGGAATGTTCACGTTTTTT
GCGGAGTATTTTAGTGTTGTGCTACTGCTTCAAGACAATATATGTACCTT
ACTTCGCCCTCGGCATTGTCTGTATACCCCCAAACCTACTTGCTGACATT
CTGAGCGGGCGTAAGCCGAGTTTTTCCCCTCCTGTCCATTGTGCATCCTT
TACTCTGCCTACATTGCGTTGCGTTGCGTTGCGTTGGTTTAGAGCCCGTA
CACTTTTGATAGGTAGTAGTGACACTCTTGATAGGTTTCTGATTTGTATT
TTTTTATTTGATTGATTGTCGCGTAAAGTAACAACGTAATGATCACGCTG
TTAGATGCAAACACTCTATCAGTGGAGCAAGCCCTACCATTTGGCCATGA
GCTGTATCAACAAGCACTCGGTCCTCTCGTCGGCGACGTGAAATGCGACC
CGAGTATGTATGCGTACTGCTCTGCTTGTCATCTTACTGCAAATATATAT
ACTGTAGCTATCGTAGCAGCCTAAGTGCCTCTCAACCGAAAAGTTGTGTA
TTTCCCCTCCAATACACGGCGTAACAGCCGTATCATATGTACTGCCAACT
GGAGCTCGAGCTCAAACGAACGCTGAGCGGGGCGTTGGTAATGTTACGTA
GGGTCGTCTTTTGTTCGCATCTCCTCTAAGCTCGAGCACAGACAAACATC
AGTGGGTGGGGCGTTATTGGTTTGAGTGAACATCCTACACAGGGCGGTTG
TCTTGTGATGTATTTCCTCTACGTACAAGTACACAAGTCCGAACGTTGAC
GCACGAGTCGTTCAACGATGCTAGGGGGGCGGGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig13054:971..6454+

>mRNA_S-dermatodea_contig13054.1841.1 ID=mRNA_S-dermatodea_contig13054.1841.1|Name=mRNA_S-dermatodea_contig13054.1841.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1554bp|location=Sequence derived from alignment at S-dermatodea_contig13054:971..6454+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGCTGAACTGCTGGCTCAAGGACGGGGCGCTGGGCGTTATCAAAGC
CTTGAAGTTTTTCGAGTTGGTAGGGTCGAACACCCTCGCCCTCACCAACC
TGGCGATCTGTGTCAACTTGGCCGTCATCGTCCATATGGTGCTGAACTGC
TGGCTCAAGGACGGGGCGCTGGGCGTTATCAAAGCCTTGAAGTTTTTCGA
GTTGGTAGGGTCGAACACCCTCGCCCTCACCAACCTGGCGATCTGTGTCA
ACTTGGCCGTCATCGTCCATAGCCACCGCACTTTCTCTCGCGTGAGGGGT
GCATCGTCTCCTCGACTGATGGTGATGTTCGTTCTGGTGTCGGCGGTGGT
GGCAGCGGTCTCCGTACCGTTCGGAGATATTTGGGTGGCAACCGGACTCT
CCGTTTATCAGAACGGCAAATCACCGAGCCACCGCACTTTCTCTCGCGTG
AGGGGTGCATCGTCTCCTCGACTGATGGTGATGTTCGTTCTGGTGTCGGC
GGTGGTGGCAGCGGTCTCCGTACCGTTCGGAGATATTTGGGTGGCAACCG
GACTCTCCGTTTATCAGAACGGCAAATCACCGGGACGGCAACGAGTCCTT
GTAATCTCCTATTTCCTGGTGGAGGCAATCTGCAGCGTTGTAATGATCGT
CATCGTTGCACTCCTTCTACTCTTTCGCCGGCCCGAGCTACGCCAGGGAC
GGCAACGAGTCCTTGTAATCTCCTATTTCCTGGTGGAGGCAATCTGCAGC
GTTGTAATGATCGTCATCGTTGCACTCCTTCTACTCTTTCGCCGGCCCGA
GCTACGCCAGGTGTGGAAGCTGCACCGTCGTATCAAGACCCACTTCGCCC
TCACAATGATCGCCATCACCGCAAACGTGGCCATAACAGCCGGCGGGATA
TTTTACGTAAAAAACGGTAGTCCCATCTGGCTAGTGATCGGCTCCTGGAT
CCTGCGAGACATACACATCGCCCTGGACACTCTCGTACTCTACACCGCGC
TTGGCGTTTCTTCGTTCGACCTGGAGTTGGAGCCAAGGCACGGACCGAGC
AGGAACGTGTCCTGCATCGAAAGCTACGCTCCTCCCACGAAACGGTCGGG
CGTCAGCTCTGAATCGGTAATCGGGCGAGTTCCTTGTTTCTCAGGCGTTC
GGCCACAACACCAGCAGGTGCAACATTTTTGAGTGTGGAAGCTGCACCGT
CGTATCAAGACCCACTTCGCCCTCACAATGATCGCCATCACCGCAAACGT
GGCCATAACAGCCGGCGGGATATTTTACGTAAAAAACGGTAGTCCCATCT
GGCTAGTGATCGGCTCCTGGATCCTGCGAGACATACACATCGCCCTGGAC
ACTCTCGTACTCTACACCGCGCTTGGCGTTTCTTCGTTCGACCTGGAGTT
GGAGCCAAGGCACGGACCGAGCAGGAACGTGTCCTGCATCGAAAGCTACG
CTCCTCCCACGAAACGGTCGGGCGTCAGCTCTGAATCGGTAATCGGGCGA
GTTCCTTGTTTCTCAGGCGTTCGGCCACAACACCAGCAGGTGCAACATTT
TTGA
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