prot_S-dermatodea_contig12999.1817.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12999.1817.1
Unique Nameprot_S-dermatodea_contig12999.1817.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length35
Homology
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 5.650e-15
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD
Sbjct:  800 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 834          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A8J2X2G4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2G4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.960e-12
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRH+F LVEAGHVT+ L+D
Sbjct:  965 MTDRLHKSGFKMHATLLRHLFHLVEAGHVTVPLFD 999          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: F0YHQ5_AURAN (Importin N-terminal domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHQ5_AURAN)

HSP 1 Score: 66.6 bits (161), Expect = 7.400e-12
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRH+F LVEAGHVT  L+D
Sbjct:  918 MTDRLHKSGFKMHATLLRHLFHLVEAGHVTAPLFD 952          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: F0YR00_AURAN (CRM1_C domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR00_AURAN)

HSP 1 Score: 66.6 bits (161), Expect = 7.480e-12
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRH+F LVEAGHVT  L+D
Sbjct:  400 MTDRLHKSGFKMHATLLRHLFHLVEAGHVTAPLFD 434          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A7S3NJ13_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ13_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.890e-11
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            +TDRLHKSGF+MHAT+LRH+F LVEAGHVT+ LYD
Sbjct:  991 LTDRLHKSGFRMHATILRHIFHLVEAGHVTVPLYD 1025          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A7S2AWL8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWL8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.300e-10
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRHMF +VE G VT+ L+D
Sbjct:  961 MTDRLHKSGFKMHATLLRHMFHVVELGQVTVPLFD 995          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.660e-10
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFK+HATLLRHMF LVE G VT  L+D
Sbjct:  161 MTDRLHKSGFKLHATLLRHMFHLVEMGQVTAPLFD 195          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A1Z5JBF2_FISSO (Exportin-1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBF2_FISSO)

HSP 1 Score: 61.2 bits (147), Expect = 5.870e-10
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRHMF LV+   VTL L+D
Sbjct:  939 MTDRLHKSGFKMHATLLRHMFHLVQMNQVTLPLFD 973          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A7S2R061_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R061_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.100e-9
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMH+TLLRHMF LV+   VT+ LYD
Sbjct:  672 MTDRLHKSGFKMHSTLLRHMFHLVQMNQVTVPLYD 706          
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Match: A0A7S1YZH3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZH3_TRICV)

HSP 1 Score: 60.1 bits (144), Expect = 1.500e-9
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD 35
            MTDRLHKSGFKMHATLLRHMF LV+   VT+ L+D
Sbjct:  958 MTDRLHKSGFKMHATLLRHMFHLVQMNQVTVPLFD 992          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12999.1817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJK2_9PHAE5.650e-15100.00CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A8J2X2G4_9STRA3.960e-1285.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YHQ5_AURAN7.400e-1285.71Importin N-terminal domain-containing protein n=2 ... [more]
F0YR00_AURAN7.480e-1285.71CRM1_C domain-containing protein n=1 Tax=Aureococc... [more]
A0A7S3NJ13_9STRA1.890e-1180.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2AWL8_9STRA2.300e-1080.00Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A6U1LIT5_9STRA3.660e-1080.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5JBF2_FISSO5.870e-1080.00Exportin-1 n=2 Tax=Fistulifera solaris TaxID=15195... [more]
A0A7S2R061_9STRA1.100e-977.14Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S1YZH3_TRICV1.500e-977.14Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..35
e-value: 5.3E-9
score: 37.3
IPR014877Exportin-1, C-terminalPFAMPF08767CRM1_Ccoord: 1..35
e-value: 7.1E-8
score: 32.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12999contigS-dermatodea_contig12999:6518..6622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12999.1817.1mRNA_S-dermatodea_contig12999.1817.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12999 6500..6622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12999.1817.1 ID=prot_S-dermatodea_contig12999.1817.1|Name=mRNA_S-dermatodea_contig12999.1817.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=35bp
MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR014877XPO1_C_dom
IPR016024ARM-type_fold