prot_S-dermatodea_contig12996.1815.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12996.1815.1
Unique Nameprot_S-dermatodea_contig12996.1815.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length161
Homology
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 1.050e-81
Identity = 133/153 (86.93%), Postives = 145/153 (94.77%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSS 155
            QLRSMVSDWS G+APSEDYKKYKR+QG+V+ K  PRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSG LG+EDLKKED+ LL+TYYE+SFGFPYLLDLGGTIR++TDLGDLWYREYHLELTKEIQFPIEMS PWIITEHIVKTKRAMA+ S+
Sbjct:  523 QLRSMVSDWSDGVAPSEDYKKYKRAQGRVEAKGAPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGVLGREDLKKEDLGLLRTYYEQSFGFPYLLDLGGTIRSSTDLGDLWYREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSA 675          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 4.970e-81
Identity = 131/153 (85.62%), Postives = 145/153 (94.77%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSS 155
            QLRSMVSDW+ G+APSEDYKKYKR+QG+V+ K  PRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSG LG+EDLK+ED+ LL+TYYE+SFGFPYLLDLGGTIR++TDLGDLWYREYHLELTKEIQFPIEMS PWIITEHIVKTKRAMA+ S+
Sbjct:  233 QLRSMVSDWTDGVAPSEDYKKYKRAQGRVEAKGAPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGVLGREDLKREDLELLRTYYEQSFGFPYLLDLGGTIRSSTDLGDLWYREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSA 385          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A835YVZ9_9STRA (Cytoplasmic fragile-X interacting family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ9_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.800e-42
Identity = 77/125 (61.60%), Postives = 97/125 (77.60%), Query Frame = 0
Query:   37 PRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKT--KRAMALRSSSAPS 159
            P RV  PS++QLQL R++VRAI DE+SELRQ SG LGKEDL K+D+  + T+Y ESF FPYL+DL GTIRA +DLGDLW+REYHLE+T+ IQFP+E S PWI+TEH+V +  K   A R++   S
Sbjct:  620 PPRVTAPSTSQLQLARSVVRAICDESSELRQGSGILGKEDLTKDDMEAMMTFYAESFAFPYLIDLSGTIRAASDLGDLWFREYHLEITQSIQFPLEQSFPWILTEHMVSSSGKSTSAARAAGPSS 744          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: F0YNJ9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNJ9_AURAN)

HSP 1 Score: 149 bits (375), Expect = 1.360e-39
Identity = 70/142 (49.30%), Postives = 104/142 (73.24%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIV 144
            +LR +V+DW   + P +DY +Y R  G+V+    P RVVGPS TQLQL+R MVR+++D+ ++L+   G   K DL++ED+ L++T+Y ES  F Y+L+   T+RA +DL DLWYRE++LEL+ +IQF IE+S PWI+TEH++
Sbjct:   56 KLRRLVADWPDSMEPVDDYTRYSRQDGRVEAVH-PVRVVGPSPTQLQLMRTMVRSMFDQRNQLKV--GMFSKRDLEREDLQLMETFYNESLCFQYILNHAVTLRANSDLADLWYREFYLELSGQIQFAIELSFPWILTEHVI 194          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: F0YL26_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL26_AURAN)

HSP 1 Score: 149 bits (375), Expect = 1.590e-38
Identity = 70/142 (49.30%), Postives = 104/142 (73.24%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIV 144
            +LR +V+DW   + P +DY +Y R  G+V+    P RVVGPS TQLQL+R MVR+++D+ ++L+   G   K DL++ED+ L++T+Y ES  F Y+L+   T+RA +DL DLWYRE++LEL+ +IQF IE+S PWI+TEH++
Sbjct:  524 KLRRLVADWPDSMEPVDDYTRYSRQDGRVEAVH-PVRVVGPSPTQLQLMRTMVRSMFDQRNQLKV--GMFSKRDLEREDLQLMETFYNESLCFQYILNHAVTLRANSDLADLWYREFYLELSGQIQFAIELSFPWILTEHVI 662          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A8J2T1L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1L4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.080e-36
Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIV 144
            +LR +VSDW   I P  DY  Y R  G+V+     R VVGP+ TQL+L+R MVRA+YD  ++LR    F  K+DL+KED+ L+  +Y ES  F YLL+  GT+ + +DLGDLWYRE++LEL+ E+QF IE+SL WI+ EH++
Sbjct:  526 KLRRLVSDWPKNIEPITDYIYYSRQDGRVEPTHTAR-VVGPTFTQLRLLRTMVRAMYDPRNQLRVQ--FFSKKDLEKEDLQLMDYFYCESLCFQYLLNYTGTLTSNSDLGDLWYREFYLELSGEVQFAIELSLAWILAEHVI 664          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A7S2F5C9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5C9_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.240e-34
Identity = 67/152 (44.08%), Postives = 104/152 (68.42%), Query Frame = 0
Query:    4 LRSMVSDWSAGIAPSEDYKKYKRSQGK----VDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLG----KEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTK 147
            LR +++DW+ G    +DY+ Y R   +    V   + P RVV  S TQ Q++R +VR++YDE ++ +   G +     + DL+KED  +L+ ++ + + FPYLL+ G TIR+ +DLGDLWYRE++LE+T+++QFPIE SLPWI+TEHI+K +
Sbjct:   49 LRRLIADWNNGQERDDDYENYSRQNKETREGVKAMNHPIRVVSASPTQYQIMRTIVRSMYDERTQ-KSHGGIMSFQKTRHDLEKEDRRILEQFFGDIYDFPYLLNYGSTIRSCSDLGDLWYREFYLEITQQVQFPIEASLPWILTEHIIKNQ 199          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: D2VQD6_NAEGR (Component of scar regulatory complex n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VQD6_NAEGR)

HSP 1 Score: 127 bits (319), Expect = 5.490e-31
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSSSAP 158
            +LR++  DW     P +D  K  + +G+  + + P+R+VGPS TQL ++R+++  +Y E S   Q SG   K+D     V   K +Y +++ + YLL    T+R   DL DLWYRE++LE++K+IQFPIEMSLPWI+TE I+K   +  + S   P
Sbjct:  531 ELRNLAGDWLN--EPPQDITKPTKKKGEAAL-EYPKRIVGPSFTQLHMIRSIISTLYSERSPGMQKSGIFSKKDFNDSHVESFKEFYNKTYTWNYLLAYSTTLRRAADLADLWYREFYLEISKKIQFPIEMSLPWILTEEILKRTNSALMESIIYP 683          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A6A5BI27_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BI27_NAEFO)

HSP 1 Score: 126 bits (316), Expect = 1.390e-30
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    3 QLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQLVRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAMALRSSSAP 158
            +LR++  DW     P ++  K  + +G+  V D P+R+VGPS TQL ++R++V  +Y E S   Q SG   K+D     V +L+ +Y +++ + YLL    + R   DL DLWYRE++LE++K+IQF IEMSLPWI+TE I+K   +  + S   P
Sbjct:  529 ELRNLAGDWLQD--PPQEITKPNKKKGESSV-DFPKRIVGPSFTQLHMIRSIVSTLYSERSPGMQKSGIFSKKDFNDSHVEILRDFYNKTYMWNYLLAYSTSFRRAADLADLWYREFYLEISKKIQFQIEMSLPWILTEEILKRTNSALMESIIYP 681          
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Match: A0A7S1UBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBW1_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.310e-30
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 0
Query:   55 VRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLDLGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTK 147
            VRA+YDE SE RQ  G   + DL KEDV +L  +++ESF F YLL+  GT+RA +DLGDLWYRE+ LELT  +QFPIEMSLPWI+ EH++K++
Sbjct:    1 VRALYDERSEARQYRGLFARRDLGKEDVEVLTRFHQESFSFRYLLNYSGTLRACSDLGDLWYREFFLELTGRVQFPIEMSLPWILVEHVIKSQ 93          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12996.1815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y8_ECTSI1.050e-8186.93UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQX8_9PHAE4.970e-8185.62UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YVZ9_9STRA2.800e-4261.60Cytoplasmic fragile-X interacting family-domain-co... [more]
F0YNJ9_AURAN1.360e-3949.30Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
F0YL26_AURAN1.590e-3849.30Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2T1L4_9STRA3.080e-3650.70Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2F5C9_9STRA1.240e-3444.08Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D2VQD6_NAEGR5.490e-3140.38Component of scar regulatory complex n=1 Tax=Naegl... [more]
A0A6A5BI27_NAEFO1.390e-3040.38Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A7S1UBW1_9STRA4.310e-3060.22Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPRINTSPR01698CYTOFMRPINTPcoord: 108..126
score: 50.88
coord: 41..64
score: 45.83
IPR008081Cytoplasmic FMR1-interactingPFAMPF05994FragX_IPcoord: 3..149
e-value: 2.5E-42
score: 145.0
IPR008081Cytoplasmic FMR1-interactingPANTHERPTHR12195P53 INDUCIBLE PROTEIN-RELATEDcoord: 3..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12996contigS-dermatodea_contig12996:3914..6316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12996.1815.1mRNA_S-dermatodea_contig12996.1815.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12996 3914..6316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12996.1815.1 ID=prot_S-dermatodea_contig12996.1815.1|Name=mRNA_S-dermatodea_contig12996.1815.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=161bp
MPQLRSMVSDWSAGIAPSEDYKKYKRSQGKVDVKDLPRRVVGPSSTQLQL
VRAMVRAIYDENSELRQSSGFLGKEDLKKEDVVLLKTYYEESFGFPYLLD
LGGTIRATTDLGDLWYREYHLELTKEIQFPIEMSLPWIITEHIVKTKRAM
ALRSSSAPSGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int