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Homology
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: D8LLD2_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD2_ECTSI) HSP 1 Score: 351 bits (900), Expect = 1.900e-114 Identity = 181/228 (79.39%), Postives = 199/228 (87.28%), Query Frame = 1
Query: 34 GGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSIDQVKAPKVKTIGMGNIAHSAHSGKGYHHTPGKEGAG-SEKASPDSSVGTY--GRGGRIGPDALLRDSAYESFGSDDYVYDDDGDDDVGQ 708
G + +EKDNTDWIF PEGLSFPSDF++TRQICKEQKKWLMVNIQDH+EF SHRLNKDVWSNETILTLLRGNFIFWQRNK L QARYY+DKYNL G+VLPHTAILDPRTGAQLLRVVG+VEPEDLSMALVEFLENNSIDQVKAP V+TIGMGNIAH GY+ TPGK+G G SE+ SPD+SVG Y GRGGR G +L RDSAYESFGS++YVY+DD DD+GQ
Sbjct: 250 GRSSVEEKDNTDWIFKAPEGLSFPSDFLETRQICKEQKKWLMVNIQDHQEFASHRLNKDVWSNETILTLLRGNFIFWQRNKALRQARYYVDKYNLEGQVLPHTAILDPRTGAQLLRVVGFVEPEDLSMALVEFLENNSIDQVKAPAVRTIGMGNIAHH-----GYNQTPGKDGGGVSERTSPDNSVGMYSGGRGGR-GDASLSRDSAYESFGSEEYVYEDD--DDLGQ 469
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A6H5JRV7_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV7_9PHAE) HSP 1 Score: 280 bits (717), Expect = 1.270e-85 Identity = 153/227 (67.40%), Postives = 171/227 (75.33%), Query Frame = 1
Query: 34 GGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSIDQVKAPKVKTIGMGNIAHSAHSGKGYHHTPGKEGAGSEKASPDSSVGTY--GRGGRIGPDALLRDSAYESFGSDDYVYDDDGDDDVGQ 708
G + +E+DN DWIF PEGLSFPSDF++TRQICKEQKKWLM DH+EF SHRLNKDVWSNETILTLLRGNFIFWQRNK L QARYY+DKYNL G+VLPHTAILDPRTGAQLL+VVG+VEPEDLSMALVEFLENNSIDQ G G SE+ SPD+SVG Y GRGGR G +L RDSAYES+GS++YVY+DD DD+GQ
Sbjct: 458 GRSSVEERDNMDWIFKAPEGLSFPSDFLETRQICKEQKKWLM----DHQEFASHRLNKDVWSNETILTLLRGNFIFWQRNKALRQARYYVDKYNLEGQVLPHTAILDPRTGAQLLKVVGFVEPEDLSMALVEFLENNSIDQ-------------------DGGGV----------SERTSPDNSVGMYSGGRGGR-GDASLSRDSAYESYGSEEYVYEDD--DDLGQ 648
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A7S2FLK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLK4_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.980e-36 Identity = 73/163 (44.79%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 1 MLRGALGGRAGGGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEV-LPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSIDQVKAPKVKTIG 486
M+ G LG R G + D+ + +DW+F+ P+ + D ++ R++ KEQ KWL+VN+QD E F SH+LN+D W N+TI LL +FIFWQR+ T R ++ Y L+ +V LPH AIL P TG+QL G+++P+DLS+ALVEF+E N ++ + PK + G
Sbjct: 212 MMMGGLG-RGGMASSTDDLEASDWMFAPPDSVK--GDIIEARRMAKEQGKWLLVNLQDVEIFESHQLNRDTWKNDTIQALLETSFIFWQRSSTSQAGRDFLRLYGLSADVCLPHIAILGP-TGSQLWSRTGFIQPDDLSIALVEFMEANDLNAMTKPKERHFG 370
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A7S2FU61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU61_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.150e-34 Identity = 69/161 (42.86%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 4 LRGALGGRAGGGAVA-DEKDNTDWIFSIPEGLSFPS--DFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSIDQVKAPKVK 477
+ G LG GGG ++ ++ ++DW+F P L+ + D + R K+ +KWL+VN+Q + F SHRLN+D WSNETI TLL +F+FWQR+ Y+ Y ++ + LPH AI+ P TGA L G+++P++LSMALVEF+E N +D PK K
Sbjct: 2 MGGNLGVGMGGGMMSTNDIPDSDWMFPPPRNLTCAAGGDVREARNQAKDARKWLLVNVQSVDIFDSHRLNRDTWSNETIQTLLDSSFVFWQRSSGCSAGADYIRLYKVSHDDLPHIAIIGP-TGATLWSQTGFIQPDELSMALVEFIEQNDLDATTLPKPK 161
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A836CHR7_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHR7_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.120e-34 Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 4 LRGALGGRAG----GGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQI-----------CKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNS 447
L AL G G GGA E ++T+W+F P + S F DTRQ C+++K+W+MVNIQD F SHRLN+DVWS+ET+ L+ +F+FWQR T A+ + ++Y++ + LP TAI+DPRTG L+RV G++ PED+S ++E +E+ S
Sbjct: 179 LESALAGLDGLDLDGGA---EGESTEWLFPPPTDMIERSSFSDTRQATELSYARDAIACRQRKEWIMVNIQDRSVFASHRLNRDVWSDETVRALVSESFVFWQREVTSEDAQGFCERYSVRSDALPVTAIIDPRTGGMLVRVEGFISPEDMSSLIMEIMESRS 338
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A7S2WDF0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDF0_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.460e-27 Identity = 55/118 (46.61%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 124 RQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSIDQVKAPKVK 477
+Q KE++KWL+VN+Q + F SH+LN+D WS+ETI LL +FIFWQR+ R Y++ Y +A E LP AI+ P TG +L G++ P +LS ++EFLE NS+D APK++
Sbjct: 19 KQRAKEERKWLLVNLQALDNFQSHQLNRDTWSDETIQALLESSFIFWQRSSASEAGRQYLNLYRVAPEDLPEIAIIGP-TGIKLFSHSGFLPPAELSGMVLEFLEQNSLDSKDAPKMR 135
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A6H5KU22_9PHAE (UAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU22_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.990e-24 Identity = 56/147 (38.10%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 13 ALGGRAGGGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSID 453
A G R A A+++ IFS P + F DF RQ K+QKKWL+VNIQ EF HRLN+DVW +E I ++ N IFWQ+ +A+ Y +YN G PH A++DPRTG ++ G++ P + + + + S +
Sbjct: 178 AKGKRPSDPAAAEKQKKLASIFSPPTDIMFMGDFQAARQAAKQQKKWLLVNIQTEAEFDCHRLNRDVWKDEMIQNIIECNCIFWQQPSISEEAKLYCRRYNATG--FPHIALIDPRTGMRVWNFQGFLAPPEFIEKVTDVTDKISFE 322
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: D7FS95_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS95_ECTSI) HSP 1 Score: 108 bits (269), Expect = 2.420e-23 Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 13 ALGGRAGGGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSID 453
A G R A A+++ +FS P + F DF RQ K+QKKWL+VNIQ EF HRLN+DVW +E + ++ N IFWQ+ +A+ Y +YN G PH A++DPRTG ++ G++ P + + + + S +
Sbjct: 178 AKGKRPSDPAAAEKQKKLASMFSPPTDIMFMGDFQAARQAAKQQKKWLLVNIQTEAEFDCHRLNRDVWKDEMVQNIIECNCIFWQQPSISEEAKLYCRRYNATG--FPHIALIDPRTGMKVWNFHGFLAPPEFIEKVTDVTDKISFE 322
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A7S1HAU8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HAU8_HEMAN) HSP 1 Score: 106 bits (265), Expect = 5.140e-23 Identity = 63/186 (33.87%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 40 AVADEKDN-TDWIFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSIDQV-KA-PKVKTIGMGNIAHSAHSGKGYHHTPGKEGAGSEKASPDSSV 588
+ + KD + +F P L F +F R+ +E KK+ +VNIQ H+EF SH LN+D W +E + ++R +F+FWQ+ R+Y+ Y A LP I+DP TGA L R+ GY PED+ L FL++++ ++ KA P +GM + A G G + +E A+ D+++
Sbjct: 119 STGESKDTGMEMLFPPPADLMFQGNFDALRKGAEEDKKYCLVNIQKHDEFASHALNRDTWKSEQVCQVVRSSFVFWQQQFESISGRHYLSLY--ASHDLPVVDIIDPMTGALLDRIEGYTTPEDMVERLTRFLDSHTWGKMGKAMPTQVAMGMSQAQYHAVDGPGGADKRSRMSLENEDAALDAAI 302
BLAST of mRNA_S-dermatodea_contig1299.1814.1 vs. uniprot
Match: A0A7S1CF00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CF00_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.590e-22 Identity = 51/125 (40.80%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 73 IFSIPEGLSFPSDFVDTRQICKEQKKWLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYYMDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNS 447
IF P + +DF + QKKWL+VN+QD EEF SH LN+D WS+++I ++RGNFIFWQ + Y Y V P AI+DPRT +++ + G++EP L+ L +FL+ +S
Sbjct: 71 IFRPPIDIMEDTDFDNAVASANLQKKWLLVNMQDDEEFASHMLNRDTWSDDSIKEIVRGNFIFWQTFHKGAMGQRYTQFYRPT--VYPLIAIIDPRTKQKVMEITGFIEPRVLAQRLADFLDGHS 193
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 352.4 |
| Seed ortholog evalue | 1.6e-94 |
| Seed eggNOG ortholog | 2880.D8LLD2 |
| Preferred name | UBXN7 |
| KEGG rclass | RC00029 |
| KEGG ko | ko:K00006 |
| KEGG Reaction | R00842 |
| KEGG Pathway | ko00564,ko01110,ko04011,map00564,map01110,map04011 |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0012505,GO:0016020,GO:0016604,GO:0019538,GO:0019899,GO:0019941,GO:0030163,GO:0030674,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032182,GO:0032991,GO:0034098,GO:0036211,GO:0042175,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0051603,GO:0060090,GO:0070013,GO:0071704,GO:0098796,GO:0098827,GO:1901564,GO:1901565,GO:1901575 |
| EggNOG free text desc. | ubiquitin binding |
| EggNOG OGs | KOG1364@1,KOG1364@2759 |
| Ec32 ortholog description | UAS |
| Ec32 ortholog | Ec-27_002200.1 |
| EC | 1.1.1.8 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 709 |
| Cds size | 708 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1299.1814.1 >prot_S-dermatodea_contig1299.1814.1 ID=prot_S-dermatodea_contig1299.1814.1|Name=mRNA_S-dermatodea_contig1299.1814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=236bp
MLRGALGGRAGGGAVADEKDNTDWIFSIPEGLSFPSDFVDTRQICKEQKK
WLMVNIQDHEEFLSHRLNKDVWSNETILTLLRGNFIFWQRNKTLGQARYY
MDKYNLAGEVLPHTAILDPRTGAQLLRVVGYVEPEDLSMALVEFLENNSI
DQVKAPKVKTIGMGNIAHSAHSGKGYHHTPGKEGAGSEKASPDSSVGTYG
RGGRIGPDALLRDSAYESFGSDDYVYDDDGDDDVGQ back to topmRNA from alignment at S-dermatodea_contig1299:5015..14697- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1299.1814.1 ID=mRNA_S-dermatodea_contig1299.1814.1|Name=mRNA_S-dermatodea_contig1299.1814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9683bp|location=Sequence derived from alignment at S-dermatodea_contig1299:5015..14697- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTGCGCGGTGCGCTCGGGGGAAGAGCTGGCGGCGGCGCCGTTGCGGA
CGAGAAGGATAACACGGACTGGATTTTCAGCATCCCGGAGGTGCGTAAGT
GTTTGACCGCGGAGGGTTTGGTTTTGAGCCGGGAGGCGCGCGTGCGCGCG
TGGTGTGTGTCATCCGATTCCGATTCCCCTCGTTGTCGGGGTTTTATTTC
GGAGAGACGGCGTGTTTTTTTTGTGCTTTTTGTACAAGTATGCGTGTGTG
TGTGTGGCGGGGGGGAAGGGGGTGTGTGTAGAGGGGGGGAAGGGGGGAAA
GGCGGGGGTGGGTCATGGCGTAGGTTAAGCCTCGGCGAGGACGGCGAGTG
TCCTGACATACGTGGCGCGGTCCCAGAATTTTGTTTGCTTGATTGTTCTT
GTGTTTGCTGTTGTCGCGTTTTTTTCACAGCGCTATCGGCCTTGGTTCAC
GCAATGGAAGCTCGTTCAACGAATCGCGTCTGCGGTACGAAATCCACGTT
CGGTGTACGCGCACCAGCGGAACACGCGTCGTGCCTCCTTGCACGCGAAA
CCCGCTGATGTCATTCCTTGCTCGGCCTGGTGCAGCACTACGAATTATTT
TGAGCGTCGGCCGCCGTACGGCGTGCAATGTGCGTAGTATGATCTTGCCG
CGTCCGCTCCCGGCTTTCGTTGCCCCAAAATGCTGACTCGAATAGAGAGA
GCAACGCTTGGGGTCCCCCCCCCCCCAACCCCCCTGGCGCCTTAAAATAA
AAACGATTTTAATGCAATACAGCATGGCATCGGTGGATACTTCTTTTTGT
TTTTTGCCATCGGCGATTGATCCTGTGGGAACAATGCTCTGTCCTCTCGA
GGACGCGCAGTCGATTGTCTAACAGCTAAGGCATGCAAAATATTAGTACC
CCCCCCCCCCGCGTTAACCTTTTGTTTTAAAGGGGGATAAGACAAGGGTG
TTCTAAACCTTCTTTTAATATAAAGACCACCCCCCCCCACCCCCTCTGTC
ACCCCAACTTTGACGAAACCGTTCTGCAGGGACTGTCGTTCCCTTCGGAC
TTCGTGGACACGCGTCAGATCTGCAAGGAGCAGAAGAAGTGGCTCATGGT
CAACATTCAGGTGAGGCGGGTTAACGGGTAACGGCGCCCCCTTTGCAAAC
GCTGTTTGCGGTGTCTACGTACGTCCTGATTACCGCTATTATAGTACGCT
CTTCACCCTCGGCTTGTCTCGGTACCCTCCGCAGCTGGACGGTAGAAGGA
GGGTGTAGTCAAGTCCTTGTCGTGCTTTAGCTGTTGAGAACCATTGATGA
CGCATGCTCGGGAGGACGGGACATAGTTCCCACAGGATAGATGGATCGAT
CGATCGCCGATGGCCAATGGCTCCTTCCAACTGTACCAAAGATGGATAAC
CAAAAGGGTTTACTGTTCTATCTTATTCAATTATCACCTTTCCGGGTCAC
TTCTTCGATAGAGCGGGGGAGGACGAAAAAAGGTGTACCTGGTACAGTAC
GAGGCACGGGTGGACGCTTTAGCAGCTTTCTTTTGGGGGGTGGGGGGGGG
GGGGGGGGGATGGGGGGGGGTGGGGGGGTTTGTCGCGGGCGGGGCCGGCT
AGGGGGAGCCGCCTTGTGTGGGTGGAAAAAAATGTTTGTTNNNNNNNNNN
GGGAGAGCGGGAGGGGGGCGCAGGAGGGTCGCTGGCGGGGGGGGGGGGGC
GGGGGGGCGGGGTGGTGGGGCGGTTGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGTGTGTGGGTTTGTCGCAGGCGGTGCCGGC
TAGCGGACGCCGCCTTGTGTGGGTTGACAAAACTGTTTGTTTTTAGGTGG
ATTTTTGCGACGAGAGTGTGTGGACACAAGGTCCCGGTGCGGAGTTGCAA
AAAATGATAAAAGGCGGACGGGTCATTTGTTTTGTGGATAGGTATTATAG
CGAGGAGTATGCATAGTAGCTGGCTTGAATGGCCGTAAGACGGTCCAACT
CATGTTTCCATGTACCGGTTTCCGCGCGTGTTGGAAACCCCTCCAGGATG
TTTCGTTCCACGTGAATGTGGGAAGTATCCCTATTCATTTTGGCTTCGGT
ATCGTTCACACTCTCCACAGATATCGCAGGCTGTAGTAGTTAGAGCATGT
TTTACACGATGTTTTGTCTGCGGTGGTATTACAACACACTGTAAACAAAA
GTAGGCAGGCTTCGATACCCGTTGATGCGCGTGTTGCTTGGTTGTGGAAA
TCATATCCCGCCCCCTGTGCCCCCCCCCCCCCCCCGTGTGCCGTCGTGGC
ACTTGGTCTTTGATCCTTGGTCTTTGATCCTTGGCCTTTGACCCTTGGTC
TGTGGTCCTTGGTCTTTGATCCTTGGTCTTTGGTGCCCAGGACCACGAGG
AGTTTTTGAGCCACCGGCTGAACAAGGATGTGTGGTCAAACGAGACGATC
CTCACGCTGCTCAGGGGAAATTTCATCTTCTGGCAGCGGAACAAGACTCT
CGGCCAGGCCAGGCGAGCACTCGCACAGATTGCATACACTCCGCTTTCAC
GGGGGTTTCGCTTATATGCGCTGTTGTAGCAGACCCCTCCCGCGCGCGGC
CTTGTCGGGCGAGATCCGCGTCGATCGAGCAGCAGAGGGAACTTATGTCT
TGGTTTGACCACGTCGATCGAGCAGCAGAGGGAACTTATGTCTTGGTTTG
ATTGTAATTATTTAAACAATCGTTTTTTTTTTGCGCGTGTTTATGTGATT
ATTGTTTAACGCGCGTTCTCTGCGATCTTGTCACGAAACCGCGACTTGGC
TGGGATGATTGTGACTGTATCAGTCAATACGAGACAAAGAAAATTACCAT
TACCATCGTTACCATCGTTACAATCGTTACCATTATCATCATTATCATCA
CCATCGTTACTATTGTCAATATCATCATTACCATCGTCACCAGTATCATC
AATCGTCATGATCGTTGTCCTTATCATCGCCATCATCTCGATGTCATCAT
CACACAATCATCACCATCATAATCACAATCGTCATTATCGTAATCGTCGT
CATTATCATAATCATCAGCTTCGCCATCATCACCACCACCACCACCACCA
TCGTCATCATCATCACCCCCATCACCATCACCATCACCATCACCATCATC
ATCATCATCAATCAACAATCAAACAGACCGCATATGTTGTCATACACCGA
TACCTTTCCGAAAACCGTTTCGCGAGTCACTCAACAAAGTGCGGCCGATT
TTATTGCATCCCTTCCGTCCCTATCCTCTTGTCGCACGGCACAGCATATC
TCGCGGTACACCTCGCCGCAAAGGGCACAGCCGCTGGCGCTCCGCACGCG
CAGCGTAAACAAAAATCGACGCGACGGTTAATATGCTTGATCGCTTTCCG
ACTTGCCGCAATCAGGTATTACATGGACAAGTATAACCTGGCGGGTGAGG
TACTGCCACACACGGCCATCCTTGATCCGCGTACCGGTGCGCAGCTGCTG
AGGGTGGTGGGATATGTCGAGCCGGAGGACTTGAGTATGGCCCTTGTTGA
GTTTCTGGAGAACAACAGCATCGATCAGGTCAGTCCCAGGCCTCCCCTTT
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGCGGGGGGGTGGG
GTGGGGCTGGGGGGGCGGGTGTGGGGGGGGGGGGGGGGGGTGGGGGGGGG
GGGGGGGGTGGGGGGGGGCAGTGGGGGGAGCCGACGATTATTTTGTATTT
TCCGCCCGTCCCGCGCTTTAGTGTGTGTGTGTGTGTGTGCGTTTGTGTGT
GGGGGGGTGCGGTTGTTGTTTGGGTTTGCAGGCATTGTTCGATTCCGATT
CCTCTTGATTGCGTTTTCTATATCTGGAGTTACTGCTGTGTATTGTACTC
TTGCTATAATATACTCTGATATTTTAGTGCCGGGGACGGCATTCTGTATT
ACAGAAGTCGAGTTCTTCTGGGTATTTTCTCCTTGGCTCTTTGCGAAAGC
ATCTGACTACAAGTCGGGTAGGATTAAGCCGATCGGCTACAGTTGTGCAA
GTTATATCAATCACTGAATGTCGTGCACTCGATGATGCGTGTGTGTGTGT
GTGTGTGTGTGTGTATAGGACTCGCGGTTGGACGAGGTGGAGGAGCTACT
GTAGAACTCTCGCGAAATATTTCACTATTGTACAGTATAATATATTGAAA
TGAAACTGGGAAAAATATAGTTCGGGATAAAAATATAGAGGCGTTTTGGA
GGGGTTATCGCTTCATGGGAGGAGGGCCGGCGGAGAGGCCTTACGTTGAC
GCCATAAACAAACACGACAAAGAACAAAGAAAAACGCATGTCCACAAAAC
CAAACAGATACTTTCCTCCCCACTTGCCAAAATTTTTCAAAAATCTGAAA
AAACCGCTGGAAATCCGGTCGATTAGTTTCAATCCATACACAACAAAATG
GGGGGTTATACCACAAACAAAAAATCCCCTTTTTCTCTCTATATATATAC
AATCTTTTTCATAAATGCGTGAAGGGGGACTCCTGCCACCTACCATACCA
TATATTATCCCCAACGATCGGAAATGTAGGGCGCGGAAACGAGCAAAACC
CCGATCTTTCGAAATCGCATTTAATGGCGGCGGCTGCGCCAGATACATTA
GGATTCGCAGCCGCCGCCGCCGCCGTGTGTGCTGTTGGGGGGTCTTGTCA
TTTTCGTGGTGGCGTTTCGTAGCCTCGGGTCAGTAGAGCTTAGCCTTGTA
GCGTTTTCCGCTGCGGCTGCCTACTTTATGTTGTTTCCGCTCCCCAAGAC
TCAGGAAAAAGCCCATCCACGCCTTGCCCATGGTATTGTAGTCACCCGAT
CCGATGTGGTTTTCGATGAATAAAGCATCGTCCGAAGCTCTGTTCCGTGG
TTTTAAGTTTAAAGAAGCCCTTGCGGTTAACAAGCAACGCCAGCTAATCG
TTTCGCGTGATGATGCGAGGAGTTGTAGCCGCGTGGCGTTTTGTCAGCCC
GCGGCGCATCCGCGTAGGTTTGTCATCATGCCTCGTGGTGGGATATGCTT
TGACATCTGATGATGGATGCTGTTGTATTTCTGTGTCCTAAAGCGGTGCG
AGCAGGACTTCAGACAGTAAGTCCCTGTAGCTTGACAATGCCTACCTATT
GTATGATGTGGTAGATTGATGACAGGCAGCACATCATACAGGAATCCTGT
AGCTCGTGCTATTAATAGTATTAATAGTATCATAGCACATTATTATGATA
GTTTTCCTGTAAACCAGGTGTTCAGTCTCTCCGGGCGGCGTGCGGGTTAT
ATCTCTGTCATGTTGGACATCAGTATTTTGTTCGGTGTAGGGGTGCTGGA
TTTCACTTCCTCTTGTGCCTTCATGTAACCACGAGCGGTATCAGCATCCA
CTTTTGCAATTGCAAAATGGCGGGCCGGTCTGTTGTATATGTGACAATCG
ATCGATCACCAACAATGTAATTAAAAACAATATCGAAGTCTTGAAGCACA
AACCACGCGAGTGGATGTCGTTGCAGGGGACGGTTGCCCCCGTGGTTTGT
GACTTAAACAGTTTGAACGTTTGAACAGCTCGGCAGAGTTTACCGCCCCC
TGTTTTTTTTTGTTTTTTTTTGCGCACATACGACAAACCGTATTTTCCGA
AGTCCGTCTTTAGTCACATAGGATCGTCCCATCTAGCTCTCCCCGGTATG
TTCTTACCTTAGGATTTTATCGCGAACGCGTTGGGTTCGGCACCCCCGCA
GCTCGACGATTTCTAGGATCTTTGCTCACTCACGCTGTCGCGCTTTTCGC
GGCGGAGGGGAGAGAAAAAATATAATTTCGACCCTGCCAGGATTCGAACC
CGAGTCCTCCGCCCTACTGGGACGTTCTACTATCACAGGCAGTTGGTATA
CGAGTCAGTTCAACAACGGAACGCGATGGTTGACGTTTATAGGTCGATTT
ATAGGCCAATCAGAAGTTGTTCCGGCGCTTTTGATTGGTTTACGGCTGTG
TGTGTTTTTTGTTTTTGTTTTTTTGCACACATTTGACAAACCCGCTTCTC
CGAGGTCCGTCTGTGGTCACAAGGGACCATCCCACCTCTCTTATCCCCGG
TTCTTACCTTAGATTTTATCGTGGATGCATTGGGTTCGGCACTCACGCAG
CTCGCCCATTCCTCTGAGTTATACTTCCAATTGCATCATTTCAGGCCCCG
TACGTCCAAATGATACCAGGTTTGGCCACACCGACCTAGCACATACCCAT
CCTACACCCCACCTCGCACGCAACCAATGCTATGGGCTATTATAGGGTTA
GAGGGTTAGGGTTTGGGTTGGGGTGTTGTGAAAAGCAAAGGAAAAGAGGG
GGGAGGAAACACATGTCAACAATTTCCCAAAGTTGACCAAGGCGATGAAA
CTTCCCTCTTTTTTAATTTGTGACTCACGCCGCTTCCGCCGCCGCCGCCG
CCGCCTCTTTGCTCTGCTTTGCTCTGCTTTGCTTTGCTTTGCTTTGCTTT
GCTTTGCTTTGCTTTGCTTTGCTTTGCTTGCTTGCTTCATCAGGTGAAGG
CGCCAAAGGTGAAGACCATCGGCATGGGGAACATCGCGCATTCGGCGCAT
TCGGTAAGCGAAACGCCTCGTCTCACAGTCCTCGCTCGCTCCCTCTCGTC
GTGCCGTGTCGTGTCGTGTCGTGTCGTGTCGTGTCGTGTCGTGTCGTGTC
GTGTGCGCTATTTGCGAAGGCCAATACGAAACGCAACTCTTTTAGAGAGT
ATCATACCATGTTCAGATAGGAATAGGTTAAGGTTTAAAAGGTTTGTGTT
TCGCCAGTAAGAGAGGTGCTTCGGCACGACGCCAATGGCTAAGACTTTGA
TTTTCAGGAATAAGTAGTCGCCCGCGCGCCCCCGCCCCCCCGCGCGCGCC
TTTTAGTTTCGCGTTCATGTTACAGTACACAGACCAAGCGTTTTTTTCTC
CACAGCTGCGCGAAAAATAGCCTACTGGAAGCCGATGAACTATTATATTT
AATAAAGTGAGCAAATCCCTGCGGATGGCATGCGGCAGAGCCACTTCGTG
GTCGATTTCCAACCCTTGCTGAGTGAAGATTTATACAGCCAATCGCGCAC
CCTCCATAGGTTTCGCCCCGAGCGCATTCTTACATGCTATAATAGCGGGT
AGCCCCGGCTACTTTGCGAGGTGTGCGAACGGGTCGAACGTGCGAATGAT
CCGACAAAGCTTCACAAACACTACTCTATAAGCCCTATCGATTCGGCATC
AAGAGCACTACTCTAAAAATACCTACAATCGATTTGACGTCAAGAGTAAC
CTCTCACTAAATCGTTACTGAAAAATAGTCAAAGCGCTACCTATATCCAT
TAAGATGATGATGGCGCGACCTTTCGTATGATACTGATACTGTGTCATCA
TGGCATAAGACCTGCGGGAATGTAATGATGTAAGGTAGGTTCATCGAGGC
ACATTTATCTTGATTGATTTATTGATTGTTTGATTTGCACACAGATAGCC
GATCGACTTAATCCGACCCGACTTGTGGTCAGACACGCAAACAGTCAAGG
AGAAAAACAACTAATCATAACTCTACTTCTACTATACACCGTACTGTCCC
TGGTACTTACTCATAGGTACAAGAAATAAGAAATAGTACCCCAGATACAG
AACAAACGCAGGAAGATAATCGGACTCAAACAATGCTCCCTCGCCTCTCC
TGCGTCCCCGTTAATGATACTGTGTCATTATGTGATAAGATCTGCGCGAT
TGGAATGATGTAATGTCATCGAGGCACATTTCCCTGCGTCCCCGTTAAGA
GTACTGTGTCATCATGTCATAAGGCCTGCGGTAATGTAATGAGAATATGT
AATGTCATCGAGGCACATTTCCCCGCGTCCCCGTTATCGCGATCAGTCCG
AGGTTATACGCGCCCGCGCAGAAAGCGAAAGCGGCTCAAGGCGTGATTGA
TTGATGAATGATTGATGATTTTCACACCTATAACCGACCGGCCCGCCATT
TGTGCCATCGCAAAAGTGGATGCTGATCCCGCTAACTCGTGGTCACATGA
AGGCACAAGAGCAAGTGAAATCCAGCACCCCTACACCGAACAAAACACTG
ATGGCCAGACATGACAGGGATATAACCCGCACGCTGCCCGGAGCGCCTGA
CCCCCTGATCTACTGGAGAACAATCGTAAGAATGTGCTGTGATTTATGTC
AATTCCATCTTTGTATGTACCACGTATAGAGGTAATTCCATAGAGTTTTT
CCGATCTCTCTATTTCTCATCTGACCACGACCCGTATCGGCAACTGCTGG
TGGGCCGGTCGGTTGTATGTGTGATAATCAATCAATCAATCAATCAATCA
ATCAATCAATCAAATCAAATCAAATCAATAAAATGAAACATACATTGCCG
TGAGGGCGCACGCCCTTGTGCACCGCGTGCATGCGTGCTAGCTACTCGCG
GCAGGGTCATCACTTTCCCACCGCCACTATCAATACTATGTACTAGTAAC
ACTATGTACTATTAATACTATGATGTGTACAAATAATACTATGTACTATC
AACACTATGCTATTGACACCATGTACAAGTAACACTATGTACTAATAACA
CTATGTAATTTTAACACCATGTACTATTCATACTCTATACTTTTCACACT
ATGTCCTATTAATACTATGTACTATTAAACTATGTACTATTACACCATGC
ACTATTAATACTATTAATATGTACTATTAATTATATGTACTATTATACTA
TGTACTATTAACACCATGTACTATTAATACTATATACAGCCAGGAGTAAG
CCACCGTTCGGGTACTGTACCTGTTCCATGTGAGTTACAGAGTGCAGGCG
GGTGGGCTAGATAAACGAATTCACTTCGAAAAGGGGTTAGCCCTTGTGAA
ACGCAGCCTGGTATGTCCGTTTGGATACGACATGCGTTTAACACAAGCAC
CCCTAAAAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAACCCCCCACCC
CCCCCCCCCCCCCCCCCCGGCGTCCGGGGGGGGGGGGTGCGGGGGGNNNN
NNNNNNCCCCGGCCGTTAAACTGAGACCTACAACCCCCCTGCCTTTGAGG
TTCGAGGTGGGGTTGGTCGAGGTGGGGTTGGGACGCGTGGTTGTGAAAAG
CAGCCTGGCCAGCGAACCGAAAACCCGGCGCATCGCTCCGTCCCGGCATT
GTTGGGACGCGTGGTCTATGTCCGTCTGGGTACGACAGGCATTTAGAATA
TGTAAAAGTAAGTACCCCCCCCCCCCCCACCCCCCCCCCCTCCCCCCCCC
CCCACCCCCCCAACAGCCCCCCTCACTCAGCACTAATACGCTAGAGCNNN
NNNNNNNAGGTCCACCCCCGCCCTGCCCTCTCGCCCCACCCCCCCCCCCC
CCCCCGTTTTTCAACACAAACCCCCCCAACCCCCCCCCCCCCCCCCCCGC
CCTCCCCCAAACACCGTGTCATATAATACATCTGACTGAAGGGGAAGGGA
TACCACCATACTCCCGGCAAGGAGGGGGCGGGTTCCGAAAAGGCCAGCCC
GGATAGCAGCGTCGGCACATACGGCAGGGGCGGGAGGATTGGGCCGGACG
CGCTCCTCAGAGACTCGGCCTACGAGTCGTTCGGCAGCGATGATTACGTC
TACGACGATGACGGAGATGACGATGTCGGTCAG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1299:5015..14697- >mRNA_S-dermatodea_contig1299.1814.1 ID=mRNA_S-dermatodea_contig1299.1814.1|Name=mRNA_S-dermatodea_contig1299.1814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at S-dermatodea_contig1299:5015..14697- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTGCGCGGTGCGCTCGGGGGAAGAGCTGGCGGCGGCGCCGTTGCGGA
CGAGAAGGATAACACGGACTGGATTTTCAGCATCCCGGAGATGCTGCGCG
GTGCGCTCGGGGGAAGAGCTGGCGGCGGCGCCGTTGCGGACGAGAAGGAT
AACACGGACTGGATTTTCAGCATCCCGGAGGGACTGTCGTTCCCTTCGGA
CTTCGTGGACACGCGTCAGATCTGCAAGGAGCAGAAGAAGTGGCTCATGG
TCAACATTCAGGGACTGTCGTTCCCTTCGGACTTCGTGGACACGCGTCAG
ATCTGCAAGGAGCAGAAGAAGTGGCTCATGGTCAACATTCAGGACCACGA
GGAGTTTTTGAGCCACCGGCTGAACAAGGATGTGTGGTCAAACGAGACGA
TCCTCACGCTGCTCAGGGGAAATTTCATCTTCTGGCAGCGGAACAAGACT
CTCGGCCAGGCCAGGACCACGAGGAGTTTTTGAGCCACCGGCTGAACAAG
GATGTGTGGTCAAACGAGACGATCCTCACGCTGCTCAGGGGAAATTTCAT
CTTCTGGCAGCGGAACAAGACTCTCGGCCAGGCCAGGTATTACATGGACA
AGTATAACCTGGCGGGTGAGGTACTGCCACACACGGCCATCCTTGATCCG
CGTACCGGTGCGCAGCTGCTGAGGGTGGTGGGATATGTCGAGCCGGAGGA
CTTGAGTATGGCCCTTGTTGAGTTTCTGGAGAACAACAGCATCGATCAGG
TATTACATGGACAAGTATAACCTGGCGGGTGAGGTACTGCCACACACGGC
CATCCTTGATCCGCGTACCGGTGCGCAGCTGCTGAGGGTGGTGGGATATG
TCGAGCCGGAGGACTTGAGTATGGCCCTTGTTGAGTTTCTGGAGAACAAC
AGCATCGATCAGGTGAAGGCGCCAAAGGTGAAGACCATCGGCATGGGGAA
CATCGCGCATTCGGCGCATTCGGTGAAGGCGCCAAAGGTGAAGACCATCG
GCATGGGGAACATCGCGCATTCGGCGCATTCGGGGAAGGGATACCACCAT
ACTCCCGGCAAGGAGGGGGCGGGTTCCGAAAAGGCCAGCCCGGATAGCAG
CGTCGGCACATACGGCAGGGGCGGGAGGATTGGGCCGGACGCGCTCCTCA
GAGACTCGGCCTACGAGTCGTTCGGCAGCGATGATTACGTCTACGACGAT
GACGGAGATGACGATGTCGGTCAGGGGAAGGGATACCACCATACTCCCGG
CAAGGAGGGGGCGGGTTCCGAAAAGGCCAGCCCGGATAGCAGCGTCGGCA
CATACGGCAGGGGCGGGAGGATTGGGCCGGACGCGCTCCTCAGAGACTCG
GCCTACGAGTCGTTCGGCAGCGATGATTACGTCTACGACGATGACGGAGA
TGACGATGTCGGTCAG back to top
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