prot_S-dermatodea_contig12988.1812.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12988.1812.1
Unique Nameprot_S-dermatodea_contig12988.1812.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length148
Homology
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BLAST of mRNA_S-dermatodea_contig12988.1812.1 vs. uniprot
Match: D8LTR5_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR5_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.630e-10
Identity = 61/144 (42.36%), Postives = 76/144 (52.78%), Query Frame = 0 
Query:   20 AGKSTALSVSLGRAAFTIDP--GYIEVLPDGDLFVTLQDKPEXXXXXXXCNRSATLSPWTGSA------VASPRAALSTKTGGSNGSGVHHGSSTPGKSLKSRML--GKGGGGSSFASG------TRPAQGGVIIKMDFVRIEH 147
            AG +  +   LG     ++     IE LP G+L+V+L+DK E        +R   LSP TGS         SPR  LS+K G SNG+     SS   KS  + ML  GK GG S  + G      +RPAQGGV+IKMDFVRIEH
Sbjct:  597 AGAAARVENLLGEPKRVVEAMSASIEELPGGELYVSLEDKKEANTG----DRFGGLSPLTGSGSVVSSRATSPRPVLSSKMG-SNGNATGGLSS---KSFNNMMLKLGKSGGTSXXSGGNLGHSQSRPAQGGVVIKMDFVRIEH 732
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BLAST of mRNA_S-dermatodea_contig12988.1812.1 vs. uniprot
Match: A0A6H5L6N3_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N3_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.630e-9
Identity = 59/147 (40.14%), Postives = 75/147 (51.02%), Query Frame = 0 
Query:   17 VDSAGKSTALSVSLGRAAFTIDP--GYIEVLPDGDLFVTLQDKPEXXXXXXXCNRSATLSPWTGSA------VASPRAALSTKTGGSNGSGVHHGSSTPGKSLKSRML--GKGGGGSSFASG------TRPAQGGVIIKMDFVRIEH 147
            V  +G +  +   LG     ++     I+ LP G+L+V+L+DK E        +R   LSP TGS         SPR  LS K G SNG+     SS   KS  + ML   K GG S  + G      +RPAQGGV+IKMDFVRIEH
Sbjct:  620 VSGSGAAARVENLLGEPKGVVEATSASIKQLPGGELYVSLEDKKEKDAST--ADRFGGLSPLTGSGSMASSRANSPRPVLSNKMG-SNGNATGGLSS---KSFNNMMLKLSKSGGTSGGSGGNLGHSQSRPAQGGVVIKMDFVRIEH 760
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12988.1812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTR5_ECTSI1.630e-1042.36Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L6N3_9PHAE6.630e-940.14Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12988contigS-dermatodea_contig12988:3565..6222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12988.1812.1mRNA_S-dermatodea_contig12988.1812.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12988 477..6222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12988.1812.1 ID=prot_S-dermatodea_contig12988.1812.1|Name=mRNA_S-dermatodea_contig12988.1812.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=148bp
PPTVPRGGGEDGGVFCVDSAGKSTALSVSLGRAAFTIDPGYIEVLPDGDL
FVTLQDKPEDKPEDKSCNRSATLSPWTGSAVASPRAALSTKTGGSNGSGV
HHGSSTPGKSLKSRMLGKGGGGSSFASGTRPAQGGVIIKMDFVRIEH*
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