prot_S-dermatodea_contig9995.17911.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9995.17911.1
Unique Nameprot_S-dermatodea_contig9995.17911.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length257
Homology
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: D8LD24_ECTSI (THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 4.120e-134
Identity = 203/257 (78.99%), Postives = 237/257 (92.22%), Query Frame = 0
Query:    1 MVADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTENASFGSTVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFVCFAKTWIRNKCPSIETLITKFRLQPRMAFHIWRPVINEHLMRHWFPKAGTK 257
            MVADS++FVG TLGLDC+AYTMVQH+CQ+NR F+ +SGL LERWVTNLSTFAGLL+RK+P+ +SK +LSWAVR LGEGGE AMAAGK+LREVLH+AGGVQVLDGWSITQAQVDGKGGGDVLR ENASFGSTVKPI+RA+ +LQE+TE AGASLPLLVLPALQ  +LLYEGGS+DDQMRGKPQPHLKVLGHR+DETHTT+LQA EFVC +K WI++KCP+I+TL+T + L+PR+ FHIWRPVINE+L++ WFPKAGTK
Sbjct: 1023 MVADSMKFVGKTLGLDCMAYTMVQHLCQSNRSFVSDSGLDLERWVTNLSTFAGLLHRKNPDADSKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGSTVKPIKRAKVILQEATEKAGASLPLLVLPALQAGSLLYEGGSLDDQMRGKPQPHLKVLGHRADETHTTLLQAMEFVC-SKAWIKSKCPAIKTLLTTYGLEPRVVFHIWRPVINENLIKCWFPKAGTK 1278          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: UPI0019052288 (transcription factor/nuclear export subunit protein 2-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019052288)

HSP 1 Score: 81.3 bits (199), Expect = 9.840e-14
Identity = 67/250 (26.80%), Postives = 118/250 (47.20%), Query Frame = 0
Query:    2 VADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPET-ESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTENASFGSTVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFVCFAK-TWIRNKCPSIETLITKFRLQPRMAFHIWRPVINEHLMRH 249
            +A+S R + + LG D + Y+++     + +  M E G ++  W+ +LST+   LY+K   + +S  +L      L     A +    +L+E++ +    Q+    ++T  QV   GGG           ST+ P +     L  + +    ++ LLVL A Q E  +        +   K + HLK + +  DE    + Q  EF+  A  T   +  PS+  L T ++LQP +AFHIWRP +++ ++ H
Sbjct:  575 IAESARSLTY-LGYDVLVYSVLTAFTNSAKPRMKEDGTSVAMWLQSLSTYTATLYKKFGGSMDSGPILQLLAHRLKNFRSADLI---ILKELIAKT--TQIQPQANLTDDQVACMGGG-----------STLHPNKNGIRRLSGALQRTDLTVALLVLIAQQREFCI--------ETVDKSEEHLKHISNLYDECQAILFQYVEFLISAYGTDYASLLPSLHELCTTYKLQPDIAFHIWRPALHDPILTH 799          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: A0A316W112_9BASI (THO complex subunit 2 n=1 Tax=Ceraceosorus guamensis TaxID=1522189 RepID=A0A316W112_9BASI)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-12
Identity = 60/236 (25.42%), Postives = 110/236 (46.61%), Query Frame = 0
Query:   13 LGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTE-----NASFGS-TVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFVC--FAKTWIRNKCPSIETLITKFRLQPRMAFHIWRP 240
            L  D   + ++  +    +    + G  +  W+ +LS+FAG+LYR+H E +   VL +    L +     +    ++RE++ +  G++ L   ++   Q+    GG +LR E     NA  GS T +    +   L  + E +  ++PLL+L A Q +A +Y        + G  +  LK +G+  D    T+ Q  EF+      +      P +  L ++F ++P +AFH+ RP
Sbjct:  819 LEYDVFTFILLDALSNPEKERTKQDGTNISLWLKSLSSFAGMLYRRHKEIDVGPVLQYMANQLKQDNSKDLV---LIRELVLKMSGIEPLA--NLGDKQIAALTGGRLLRREAMMVANAQIGSDTRREFHDSGARLLLAMEASCMTIPLLILIAQQRQACIY--------LIGDDEGGLKYMGNAFDSCQETLFQYVEFLLTQLEPSAYSTLIPKLSDLYSRFSIEPAIAFHMARP 1041          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: A0A0P1BR10_9BASI (THO complex subunit 2 n=1 Tax=Ceraceosorus bombacis TaxID=401625 RepID=A0A0P1BR10_9BASI)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-12
Identity = 60/236 (25.42%), Postives = 110/236 (46.61%), Query Frame = 0
Query:   13 LGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTE-----NASFGS-TVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFVC--FAKTWIRNKCPSIETLITKFRLQPRMAFHIWRP 240
            L  D   + ++  +    +    + G  +  W+ +LS+FAG+LYR+H E +   VL +    L +     +    ++RE++ +  G++ L   ++   Q+    GG +LR E     NA  GS T +    +   L  + E +  ++PLL+L A Q +A +Y        + G  +  LK +G+  D    T+ Q  EF+      +      P +  L ++F ++P +AFH+ RP
Sbjct:  802 LEYDVFTFILLDALSNPEKERTKQDGTNISLWLKSLSSFAGMLYRRHKEIDVGPVLQYMANQLKQDNSKDLV---LIRELVLKMSGIEPLA--NLGDKQIAALTGGRLLRREAMMVANAQIGSDTRREFHDSGARLLLAMEASCMTIPLLILIAQQRQACIY--------LIGDDEGGLKYMGNAFDSCQETLFQYVEFLLTQLEPSAYSTLIPKLSDLYSRFSIEPAIAFHMARP 1024          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: H3EEY0_PRIPA (THO complex subunit 2 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=H3EEY0_PRIPA)

HSP 1 Score: 73.9 bits (180), Expect = 2.910e-11
Identity = 63/242 (26.03%), Postives = 115/242 (47.52%), Query Frame = 0
Query:    2 VADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTENASFGSTVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFVCFAKTWIRNKCPSIETLITKFRLQPRMAFHIWRPVIN 243
            V D+LRF+ + L LD + + +++ +   ++  +  S  T   W+ +L+T  G L +K+   E   VL +    L     A +    +L E+LH   G++       TQ  ++   GG++LR E  S+GS+++  ++A   L+++      ++ L +L A Q +A+LY+G         K  P LK+ G  +D+   T++Q + F+      + N     E    K+ L    AF + RP   
Sbjct:  578 VVDALRFLTN-LELDVLLFCVLEQLASPSKESLKASDGTTSSWLISLATMVGALLKKYT-IELAPVLDYVSMQLRNNKSADLL---ILNEMLHSMAGIEKAA--QATQEHIEALSGGELLRQEAGSYGSSIRN-KKAAVRLRDAILKEDLAVGLSILVAQQRDAILYQGS--------KEMP-LKLTGEMADQCRDTLVQFSSFL------LENM--KAEEYARKYSLPVDAAFFLARPAFR 794          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: F4NSU7_BATDJ (THO complex subunit 2 n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4NSU7_BATDJ)

HSP 1 Score: 69.7 bits (169), Expect = 7.510e-10
Identity = 56/250 (22.40%), Postives = 126/250 (50.40%), Query Frame = 0
Query:    1 MVADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTENASFGSTVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFV-CFAKTWIRNK-CPSIETLITKFRLQPRMAFHIWRPVINEHLMR 248
            +V D+ R++   L  D +++ +++ +    ++ ++E+G  +  W+  LS+F G+L R+H E +   +L +    L       +    +L++++    G++ LD    T+ Q+D   GG+ +R E A    +++  R+    L ++   +  ++P+ +L A Q + +++   + +          LK+LG  +D      L   +F+ C     + +K   +++ ++ +F L   +AFHI RPV++ H++R
Sbjct:  738 VVVDASRYLTD-LEFDVMSFCLIEALSDRRKQRVEENGTYISPWLKALSSFTGMLLRRH-EVDMTGMLQYIANQLASDNVYDLI---VLQDIIISMSGIKPLD--DATEHQLDALAGGETVRRE-ALILESLRLTRKPTSRLVDTLVQSQLAMPIGMLIARQRKEIIFRTNTDE----------LKILGWLNDYCQCKFLLYFDFLSCNLSIDVYSKDLATLDEMVGEFGLDMEVAFHILRPVLS-HVLR 968          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: A0A177W8L4_BATDL (THO complex subunit 2 n=2 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177W8L4_BATDL)

HSP 1 Score: 69.7 bits (169), Expect = 8.050e-10
Identity = 56/250 (22.40%), Postives = 126/250 (50.40%), Query Frame = 0
Query:    1 MVADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRTENASFGSTVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFV-CFAKTWIRNK-CPSIETLITKFRLQPRMAFHIWRPVINEHLMR 248
            +V D+ R++   L  D +++ +++ +    ++ ++E+G  +  W+  LS+F G+L R+H E +   +L +    L       +    +L++++    G++ LD    T+ Q+D   GG+ +R E A    +++  R+    L ++   +  ++P+ +L A Q + +++   + +          LK+LG  +D      L   +F+ C     + +K   +++ ++ +F L   +AFHI RPV++ H++R
Sbjct:  738 VVVDASRYLTD-LEFDVMSFCLIEALSDRRKQRVEENGTYISPWLKALSSFTGMLLRRH-EVDMTGMLQYIANQLASDNVYDLI---VLQDIIISMSGIKPLD--DATEHQLDALAGGETVRRE-ALILESLRLTRKPTSRLVDTLVQSQLAMPIGMLIARQRKEIIFRTNTDE----------LKILGWLNDYCQCKFLLYFDFLSCNLSIDVYSKDLATLDEMVGEFGLDMEVAFHILRPVLS-HVLR 968          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: A0A6G1I866_9PEZI (THO complex subunit 2 n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I866_9PEZI)

HSP 1 Score: 68.2 bits (165), Expect = 2.670e-9
Identity = 62/251 (24.70%), Postives = 118/251 (47.01%), Query Frame = 0
Query:    1 MVADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLR--TENASFGSTVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFVCF---AKTWIRNKCPSIETLITKFRLQPRMAFHIWRPVINEHL 246
            +V +  R+  + LG D + ++++  +  + R  M   G+    W+  LSTFAG ++R++    S  +L +    L +G    +   ++L E++    G++    +S  + QV     G VLR  T  + F    +   +++ L++   ++  A L LLV  A + +   +   S D  +        KV+G+  D+ H   +Q  + +     AK + +   P++  LI+K+ LQP +A+ I RP I   L
Sbjct:  868 VVVECARYFTY-LGYDVLTWSLMSALGGSGRNRMQGDGMLTSSWLKALSTFAGRVFRRYSTMNSTPILQYVASQLQQGISTDL---EVLEEIITSMAGIRADSNYS--EEQVFALASGPVLRDQTLRSVFDKRHEAKVQSKRLIKSLLDSGLAGL-LLVAIAQERQYYPFREASEDAPV--------KVIGNNFDKLHRAFMQYLDMLRTNLPAKDFDQT-VPTLPELISKYALQPAVAYTIMRPSIQHQL 1102          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: A0A7S2EHA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHA3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.040e-8
Identity = 51/184 (27.72%), Postives = 91/184 (49.46%), Query Frame = 0
Query:   30 NRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWS---ITQAQVDGKGGGDVLRTENASFG----STVKPIRRARHLLQESTENAGASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTMLQATEFV 206
            +R  +   G+ + +W+++L TF G  Y+K P+ E + +L +    L +G    +    +LR +L  AGG    D  S   ++Q Q++G+ G  +L+ E ASFG    S  K  RR R +LQ+  ++ G +L L++L  ++   + +   S           H+K++G+  D     M    EF+
Sbjct:    8 DRSKLKMDGVNVTQWLSSLETFTGAFYKKFPDVELRGILQYLTHRLQQGQILELG---VLRSLLKTAGGYGFADYGSTASLSQVQLEGRCGSQLLKRETASFGIVEKSNKKASRRLRCVLQK--DDLGVTL-LILLAQIRFRVMFHVSSSSPK--------HIKLIGNLYDNCVVVMGLMLEFL 177          
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Match: A0A7S1ZET3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZET3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.130e-8
Identity = 42/135 (31.11%), Postives = 73/135 (54.07%), Query Frame = 0
Query:   30 NRRFMDESGLTLERWVTNLSTFAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQVLDGWS---ITQAQVDGKGGGDVLRTENASFG----STVKPIRRARHLLQESTENAGASLPLLV 157
            +R  +   G+ + +W+++L TF G  Y+K P+ E + +L +    L +G    +    +LR +L  AGG    D  S   ++Q Q++G+ G  +L+ E ASFG    S  K  RR R +LQ+  ++ G +L +L+
Sbjct:    8 DRSKLKMDGVNVTQWLSSLETFTGAFYKKFPDVELRGILQYLTHRLQQGQILELG---VLRSLLKTAGGYGFADYGSTASLSQVQLEGRCGSQLLKRETASFGIVEKSNKKASRRLRCVLQK--DDLGVTLLILL 137          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9995.17911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LD24_ECTSI4.120e-13478.99THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=287... [more]
UPI00190522889.840e-1426.80transcription factor/nuclear export subunit protei... [more]
A0A316W112_9BASI1.100e-1225.42THO complex subunit 2 n=1 Tax=Ceraceosorus guamens... [more]
A0A0P1BR10_9BASI1.100e-1225.42THO complex subunit 2 n=1 Tax=Ceraceosorus bombaci... [more]
H3EEY0_PRIPA2.910e-1126.03THO complex subunit 2 n=2 Tax=Pristionchus pacific... [more]
F4NSU7_BATDJ7.510e-1022.40THO complex subunit 2 n=1 Tax=Batrachochytrium den... [more]
A0A177W8L4_BATDL8.050e-1022.40THO complex subunit 2 n=2 Tax=Batrachochytrium den... [more]
A0A6G1I866_9PEZI2.670e-924.70THO complex subunit 2 n=1 Tax=Trichodelitschia bis... [more]
A0A7S2EHA3_9STRA1.040e-827.72Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1ZET3_9STRA4.130e-831.11Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021726THO complex, subunitTHOC2, N-terminalPFAMPF11732Thoc2coord: 1..49
e-value: 5.8E-7
score: 29.5
IPR040007THO complex subunit 2PANTHERPTHR21597THO2 PROTEINcoord: 2..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9995contigS-dermatodea_contig9995:423..7416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9995.17911.1mRNA_S-dermatodea_contig9995.17911.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9995 402..7416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9995.17911.1 ID=prot_S-dermatodea_contig9995.17911.1|Name=mRNA_S-dermatodea_contig9995.17911.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=257bp
MVADSLRFVGHTLGLDCVAYTMVQHICQTNRRFMDESGLTLERWVTNLST
FAGLLYRKHPETESKAVLSWAVRCLGEGGEAAMAAGKMLREVLHQAGGVQ
VLDGWSITQAQVDGKGGGDVLRTENASFGSTVKPIRRARHLLQESTENAG
ASLPLLVLPALQTEALLYEGGSMDDQMRGKPQPHLKVLGHRSDETHTTML
QATEFVCFAKTWIRNKCPSIETLITKFRLQPRMAFHIWRPVINEHLMRHW
FPKAGTK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021726THO_THOC2_N
IPR040007Tho2