prot_S-dermatodea_contig12939.1790.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12939.1790.1
Unique Nameprot_S-dermatodea_contig12939.1790.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length423
Homology
BLAST of mRNA_S-dermatodea_contig12939.1790.1 vs. uniprot
Match: D8LAT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT1_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 1.300e-70
Identity = 207/453 (45.70%), Postives = 256/453 (56.51%), Query Frame = 0
Query:    1 KIKVLVAEGNLGGRGRRQAAELHQALQQVVGAAAMYNHLISKHGGVGTRRK--RGVSDPAGGGNVKGA--------CVCGGSVGSCKAISSLLKAELDKISVAAESERRGALLKKFRQVERRSGGLCNPDLLEKVVRSSSSDAKASPKMPPPAAEALRPALAGAKPP-APNDPGMSVVGLTTPAPGGGAFFATDSSAGGGRGGIRRIGGN-------AEDVPWADDMLCSANRRRNGALLRTRGRALAKSLTRQLNGVSKDLQGVASRLPPWEEDEELEEDTLEDQVHGSGVF-LSSWSFFFFVAISRRLSVRRCVAFHFMRSLSRRCCGCANALSARESASRSSFTS--------VDTTDSFSSEKPLEPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGRKEA---KARRQDWKLDAQELSLIRREEERVLKPPVLARLLAAGARLEC 423
            KI+VLVAEG+L GR RRQAAELHQALQQVVGAAA+YNHL+ KHGG+GT+ K  +  +D      V G         C CGG  GSCKAISSLLK+E+DK+  AAE ER+G +LKKF+QVERRSGGLCNPDLLE +VRS+  +   S +  P A            PP +P+  G              +    D      RGGI  +GG+       A+DVPWA+DMLC + R+R+ A+L+TRGRALAK L R L GVS D   VASRLPPWEE E+ +ED    Q  G+ +  + S    F                              +A ++ +   R S +S        + +  S +   P+   AXXXXXXX          XXXXXXXXXXX      A   ++RRQDWKL AQELSLI++EEERV+KP VL  LLA GA L C
Sbjct:   86 KIRVLVAEGSLLGRNRRQAAELHQALQQVVGAAAIYNHLLVKHGGLGTKPKECKTSNDTGAAAAVAGTEKNDNRMVCGCGGGSGSCKAISSLLKSEMDKVVAAAEKERKGEMLKKFKQVERRSGGLCNPDLLENIVRSTGGEG--SGESSPSAXXXXXXXXXXXXPPRSPDHKGQDAAIRAL-----NSLVVVDVEKDE-RGGIAGVGGSGGAVSSGAQDVPWAEDMLCRSVRKRHAAVLKTRGRALAKGLARMLKGVSNDXXXVASRLPPWEECEDDDEDKPTPQEEGAELDRIRSRGNIFSAPTHEXXXXXXXXXXXXXXXXXXXXXSYVSAATSEDGNERLSLSSDTAPTAASISSNGSAAIRSPVAAMAXXXXXXXSPGSDAVPAAXXXXXXXXXXXXXXXXAANCVRSRRQDWKLSAQELSLIKKEEERVMKPDVLTTLLAKGASLGC 530          
BLAST of mRNA_S-dermatodea_contig12939.1790.1 vs. uniprot
Match: A0A6H5KYX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX3_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.070e-37
Identity = 158/359 (44.01%), Postives = 194/359 (54.04%), Query Frame = 0
Query:   87 LDKISVAAESERRGALLKKFRQVERRSGGLCNPDLLEKVVRSSSSDAKASPKMPPPAAEALRPALAGAKPP-APNDPGMSVVGLTTPAPGGGAFFATDSSAGGGRGGIRRIGGN-------AEDVPWADDMLCSANRRRNGALLRTRGRALAKSLTRQLNGVSKDLQGVASRLPPWEEDEELEEDTLEDQVHGSGVFLS---SWSFFFFVAISRRLSVRRCVAFHFMRSLSRRCCGCANALSARESASRSSFTSVDTTDSFSSEKPLEPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGRKE-----------AKARRQDWKLDAQELSLIRREEERVLKPPVLARLLAAGARLEC 423
            +DK+  AAE ER+G +LKKF+QVERRSGGLCNPDLLE +VRS+  +   S +  P A            PP +P+  G              +    D      RGG+  +GG+       A+DVPWA+DMLC + R+R+ A+L+TRGRALAK L R L GVS DL+GVASRLPPWEE E    D  ED+  G G  L    S    F                            C +A+++ +   R S +S +   + S         XXXXXXXXXXXXXXXXXXXXXXXXXXXX                   +RRQDWKL AQELSLI++EEERV+KP VL  LLA GA L C
Sbjct:    1 MDKVVAAAEKERKGEMLKKFKQVERRSGGLCNPDLLENIVRSTGGEG--SGESSPSAXXXXXXXXXXXXPPRSPDHKGQDAAIRAL-----NSLVVVDVEKDE-RGGVAGVGGSGGGVSSGAQDVPWAEDMLCRSVRKRHAAVLKTRGRALAKGLARMLKGVSNDLKGVASRLPPWEECE----DDDEDKPXGGGAELERIRSLGNIFSAPTHEXXXXXXXXXXXXXXXXXXXXXSCVSAVTSEDGNERLSLSSDNAPTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADCVNSRRQDWKLSAQELSLIKKEEERVMKPDVLTTLLAKGASLGC 347          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12939.1790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAT1_ECTSI1.300e-7045.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYX3_9PHAE2.070e-3744.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..349
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 375..423
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 350..374
NoneNo IPR availableTMHMMTMhelixcoord: 352..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12939contigS-dermatodea_contig12939:568..5492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12939.1790.1mRNA_S-dermatodea_contig12939.1790.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12939 568..5492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12939.1790.1 ID=prot_S-dermatodea_contig12939.1790.1|Name=mRNA_S-dermatodea_contig12939.1790.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=423bp
KIKVLVAEGNLGGRGRRQAAELHQALQQVVGAAAMYNHLISKHGGVGTRR
KRGVSDPAGGGNVKGACVCGGSVGSCKAISSLLKAELDKISVAAESERRG
ALLKKFRQVERRSGGLCNPDLLEKVVRSSSSDAKASPKMPPPAAEALRPA
LAGAKPPAPNDPGMSVVGLTTPAPGGGAFFATDSSAGGGRGGIRRIGGNA
EDVPWADDMLCSANRRRNGALLRTRGRALAKSLTRQLNGVSKDLQGVASR
LPPWEEDEELEEDTLEDQVHGSGVFLSSWSFFFFVAISRRLSVRRCVAFH
FMRSLSRRCCGCANALSARESASRSSFTSVDTTDSFSSEKPLEPKAASPA
AAAAAAAAAAAAAAAATAAAVAAARGGRKEAKARRQDWKLDAQELSLIRR
EEERVLKPPVLARLLAAGARLEC
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